RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 SOCS7O14512 581 aa20.51■□□□□ 0.87
SPIRE2-208ENST00000565628 PLEKHG5O94827 1062 aa20.51■□□□□ 0.87
SPIRE2-208ENST00000565628 TMF1P82094 1093 aa20.51■□□□□ 0.87
SPIRE2-208ENST00000565628 CABLES1Q8TDN4 633 aa20.51■□□□□ 0.87
SPIRE2-208ENST00000565628 QTRT2Q9H974 415 aaKnown RBP20.51■□□□□ 0.87
SPIRE2-208ENST00000565628 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
SPIRE2-208ENST00000565628 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
SPIRE2-208ENST00000565628 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
SPIRE2-208ENST00000565628 QRICH2Q9H0J4 1663 aa20.5■□□□□ 0.87
SPIRE2-208ENST00000565628 TESK2Q96S53 571 aa20.49■□□□□ 0.87
SPIRE2-208ENST00000565628 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
SPIRE2-208ENST00000565628 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
SPIRE2-208ENST00000565628 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
SPIRE2-208ENST00000565628 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
SPIRE2-208ENST00000565628 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
SPIRE2-208ENST00000565628 RGPD8O14715 1765 aaPredicted RBP20.46■□□□□ 0.87
SPIRE2-208ENST00000565628 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
SPIRE2-208ENST00000565628 NINLQ9Y2I6 1382 aa20.45■□□□□ 0.86
SPIRE2-208ENST00000565628 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPIRE2-208ENST00000565628 NUTM2GQ5VZR2 741 aa20.44■□□□□ 0.86
SPIRE2-208ENST00000565628 USP6P35125 1406 aa20.44■□□□□ 0.86
SPIRE2-208ENST00000565628 NLRP6P59044 892 aa20.43■□□□□ 0.86
SPIRE2-208ENST00000565628 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
SPIRE2-208ENST00000565628 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
SPIRE2-208ENST00000565628 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
SPIRE2-208ENST00000565628 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
SPIRE2-208ENST00000565628 SLC12A5Q9H2X9 1139 aa20.41■□□□□ 0.86
SPIRE2-208ENST00000565628 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
SPIRE2-208ENST00000565628 TOPAZ1Q8N9V7 1692 aa20.39■□□□□ 0.86
SPIRE2-208ENST00000565628 CPSF1Q10570 1443 aaKnown RBP20.39■□□□□ 0.85
SPIRE2-208ENST00000565628 GCP02774 474 aa20.39■□□□□ 0.85
SPIRE2-208ENST00000565628 GJD4Q96KN9 370 aaPredicted RBP20.38■□□□□ 0.85
SPIRE2-208ENST00000565628 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
SPIRE2-208ENST00000565628 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
SPIRE2-208ENST00000565628 KCNH5Q8NCM2 988 aa20.37■□□□□ 0.85
SPIRE2-208ENST00000565628 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
SPIRE2-208ENST00000565628 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 USP19O94966 1318 aa20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 VPS72Q15906 364 aa20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 SLIT2O94813 1529 aa20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
SPIRE2-208ENST00000565628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.35■□□□□ 0.85
SPIRE2-208ENST00000565628 CDK12Q9NYV4 1490 aaPredicted RBP20.35■□□□□ 0.85
SPIRE2-208ENST00000565628 ATRNO75882 1429 aa20.35■□□□□ 0.85
SPIRE2-208ENST00000565628 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
SPIRE2-208ENST00000565628 ALS2Q96Q42 1657 aa20.33■□□□□ 0.85
SPIRE2-208ENST00000565628 EVA1CP58658 441 aa20.33■□□□□ 0.85
SPIRE2-208ENST00000565628 CPDO75976 1380 aa20.32■□□□□ 0.84
SPIRE2-208ENST00000565628 EDC4Q6P2E9 1401 aaKnown RBP20.31■□□□□ 0.84
SPIRE2-208ENST00000565628 HSPA5P11021 654 aaKnown RBP20.31■□□□□ 0.84
SPIRE2-208ENST00000565628 CHRNA2Q15822 529 aa20.3■□□□□ 0.84
SPIRE2-208ENST00000565628 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
SPIRE2-208ENST00000565628 ANKRD36BQ8N2N9 1353 aa20.29■□□□□ 0.84
SPIRE2-208ENST00000565628 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
SPIRE2-208ENST00000565628 ZBTB7CA1YPR0 619 aa20.27■□□□□ 0.84
SPIRE2-208ENST00000565628 NME9Q86XW9 330 aa20.27■□□□□ 0.84
SPIRE2-208ENST00000565628 CD163L1Q9NR16 1453 aa20.26■□□□□ 0.83
SPIRE2-208ENST00000565628 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
SPIRE2-208ENST00000565628 STRN4Q9NRL3 753 aa20.26■□□□□ 0.83
SPIRE2-208ENST00000565628 SOX12O15370 315 aa20.25■□□□□ 0.83
SPIRE2-208ENST00000565628 COG3Q96JB2 828 aa20.25■□□□□ 0.83
SPIRE2-208ENST00000565628 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
SPIRE2-208ENST00000565628 ONECUT3O60422 494 aaPredicted RBP20.24■□□□□ 0.83
SPIRE2-208ENST00000565628 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
SPIRE2-208ENST00000565628 A0A0G2JS52 829 aa20.23■□□□□ 0.83
SPIRE2-208ENST00000565628 RGS12O14924 1447 aa20.23■□□□□ 0.83
SPIRE2-208ENST00000565628 MYT1Q01538 1121 aa20.23■□□□□ 0.83
SPIRE2-208ENST00000565628 SPATA31A5Q5VU36 1347 aa20.23■□□□□ 0.83
SPIRE2-208ENST00000565628 SPATA31A7Q8IWB4 1347 aa20.23■□□□□ 0.83
SPIRE2-208ENST00000565628 COL14A1Q05707 1796 aaKnown RBP20.22■□□□□ 0.83
SPIRE2-208ENST00000565628 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
SPIRE2-208ENST00000565628 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
SPIRE2-208ENST00000565628 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
SPIRE2-208ENST00000565628 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
SPIRE2-208ENST00000565628 SLIT3O75094 1523 aa20.2■□□□□ 0.82
SPIRE2-208ENST00000565628 THRAP3Q9Y2W1 955 aaKnown RBP20.19■□□□□ 0.82
SPIRE2-208ENST00000565628 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
SPIRE2-208ENST00000565628 ABCA3Q99758 1704 aa20.19■□□□□ 0.82
SPIRE2-208ENST00000565628 NWD2Q9ULI1 1742 aa20.18■□□□□ 0.82
SPIRE2-208ENST00000565628 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 FYB1O15117 783 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 LARP1Q6PKG0 1096 aaKnown RBP20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 CGNL1Q0VF96 1302 aa20.17■□□□□ 0.82
SPIRE2-208ENST00000565628 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
SPIRE2-208ENST00000565628 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
SPIRE2-208ENST00000565628 KRT27Q7Z3Y8 459 aa20.16■□□□□ 0.82
SPIRE2-208ENST00000565628 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
SPIRE2-208ENST00000565628 CCDC125Q86Z20 511 aa20.15■□□□□ 0.82
SPIRE2-208ENST00000565628 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
SPIRE2-208ENST00000565628 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
SPIRE2-208ENST00000565628 PIK3C2AO00443 1686 aa20.15■□□□□ 0.82
SPIRE2-208ENST00000565628 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
SPIRE2-208ENST00000565628 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
SPIRE2-208ENST00000565628 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
SPIRE2-208ENST00000565628 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms