RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
IFT140-206ENST00000565298 ERICH2A1L162 156 aa23.28■■□□□ 1.32
IFT140-206ENST00000565298 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
IFT140-206ENST00000565298 PANK1Q8TE04 598 aa23.28■■□□□ 1.32
IFT140-206ENST00000565298 SURF6O75683 361 aaKnown RBP23.28■■□□□ 1.32
IFT140-206ENST00000565298 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
IFT140-206ENST00000565298 FAM177BA6PVY3 158 aa23.27■■□□□ 1.32
IFT140-206ENST00000565298 PHF14O94880 888 aa23.27■■□□□ 1.32
IFT140-206ENST00000565298 DHX16O60231 1041 aaKnown RBP23.26■■□□□ 1.31
IFT140-206ENST00000565298 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
IFT140-206ENST00000565298 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
IFT140-206ENST00000565298 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
IFT140-206ENST00000565298 RALYLQ86SE5 291 aaKnown RBP23.25■■□□□ 1.31
IFT140-206ENST00000565298 GZF1Q9H116 711 aaPredicted RBP23.25■■□□□ 1.31
IFT140-206ENST00000565298 TBC1D2BQ9UPU7 963 aa23.25■■□□□ 1.31
IFT140-206ENST00000565298 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
IFT140-206ENST00000565298 ERC1Q8IUD2 1116 aa23.24■■□□□ 1.31
IFT140-206ENST00000565298 NSD3Q9BZ95 1437 aa23.24■■□□□ 1.31
IFT140-206ENST00000565298 WASLO00401 505 aaPredicted RBP23.24■■□□□ 1.31
IFT140-206ENST00000565298 FOXO3O43524 673 aa23.24■■□□□ 1.31
IFT140-206ENST00000565298 PLCH2O75038 1416 aa23.23■■□□□ 1.31
IFT140-206ENST00000565298 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
IFT140-206ENST00000565298 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
IFT140-206ENST00000565298 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
IFT140-206ENST00000565298 TNRQ92752 1358 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 GNAI2P04899 355 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 TCEAL9Q9UHQ7 104 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 PDE3AQ14432 1141 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 SRCIN1Q9C0H9 1055 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 ADGRF5Q8IZF2 1346 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 LRPPRCP42704 1394 aaKnown RBP23.22■■□□□ 1.31
IFT140-206ENST00000565298 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
IFT140-206ENST00000565298 NFXL1Q6ZNB6 911 aa23.21■■□□□ 1.31
IFT140-206ENST00000565298 MCTP1Q6DN14 999 aa23.21■■□□□ 1.31
IFT140-206ENST00000565298 CDCA7LQ96GN5 454 aa23.2■■□□□ 1.3
IFT140-206ENST00000565298 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.2■■□□□ 1.3
IFT140-206ENST00000565298 NINLQ9Y2I6 1382 aa23.2■■□□□ 1.3
IFT140-206ENST00000565298 ATP10BO94823 1461 aa23.2■■□□□ 1.3
IFT140-206ENST00000565298 TSR2Q969E8 191 aaKnown RBP23.19■■□□□ 1.3
IFT140-206ENST00000565298 GPATCH8Q9UKJ3 1502 aaKnown RBP23.19■■□□□ 1.3
IFT140-206ENST00000565298 GNL3LQ9NVN8 582 aaKnown RBP23.19■■□□□ 1.3
IFT140-206ENST00000565298 CNTROBQ8N137 903 aa23.19■■□□□ 1.3
IFT140-206ENST00000565298 NFE2L2Q16236 605 aa23.18■■□□□ 1.3
IFT140-206ENST00000565298 CNNM1Q9NRU3 951 aa23.18■■□□□ 1.3
IFT140-206ENST00000565298 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
IFT140-206ENST00000565298 DDX11L8A8MPP1 907 aa23.18■■□□□ 1.3
IFT140-206ENST00000565298 FSD1Q9BTV5 496 aa23.18■■□□□ 1.3
IFT140-206ENST00000565298 FOXD4L5Q5VV16 416 aaPredicted RBP23.17■■□□□ 1.3
IFT140-206ENST00000565298 FOXD4L4Q8WXT5 416 aaPredicted RBP23.17■■□□□ 1.3
IFT140-206ENST00000565298 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
IFT140-206ENST00000565298 GNAT3A8MTJ3 354 aa23.17■■□□□ 1.3
IFT140-206ENST00000565298 AMOTQ4VCS5 1084 aa23.17■■□□□ 1.3
IFT140-206ENST00000565298 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
IFT140-206ENST00000565298 FAM135AQ9P2D6 1515 aa23.16■■□□□ 1.3
IFT140-206ENST00000565298 STARD3NLO95772 234 aa23.16■■□□□ 1.3
IFT140-206ENST00000565298 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
IFT140-206ENST00000565298 CDC45O75419 566 aa23.15■■□□□ 1.3
IFT140-206ENST00000565298 HIP1O00291 1037 aa23.15■■□□□ 1.3
IFT140-206ENST00000565298 SAFBQ15424 915 aaKnown RBP eCLIP23.14■■□□□ 1.29
IFT140-206ENST00000565298 CREBRFQ8IUR6 639 aa23.14■■□□□ 1.29
IFT140-206ENST00000565298 NOS1P29475 1434 aa23.13■■□□□ 1.29
IFT140-206ENST00000565298 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
IFT140-206ENST00000565298 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
IFT140-206ENST00000565298 CWC22Q9HCG8 908 aaKnown RBP23.13■■□□□ 1.29
IFT140-206ENST00000565298 MPHOSPH8Q99549 860 aa23.13■■□□□ 1.29
IFT140-206ENST00000565298 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
IFT140-206ENST00000565298 WDR7Q9Y4E6 1490 aa23.12■■□□□ 1.29
IFT140-206ENST00000565298 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
IFT140-206ENST00000565298 MYL6BP14649 208 aa23.12■■□□□ 1.29
IFT140-206ENST00000565298 CCDC47Q96A33 483 aaKnown RBP23.12■■□□□ 1.29
IFT140-206ENST00000565298 NOB1Q9ULX3 412 aaKnown RBP23.12■■□□□ 1.29
IFT140-206ENST00000565298 ZNF518AQ6AHZ1 1483 aa23.12■■□□□ 1.29
IFT140-206ENST00000565298 GOLGA6L3A6NEY3 463 aa23.11■■□□□ 1.29
IFT140-206ENST00000565298 NME9Q86XW9 330 aa23.11■■□□□ 1.29
IFT140-206ENST00000565298 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
IFT140-206ENST00000565298 TPD52L1Q16890 204 aaPredicted RBP23.11■■□□□ 1.29
IFT140-206ENST00000565298 PPP1R1BQ9UD71 204 aaPredicted RBP23.11■■□□□ 1.29
IFT140-206ENST00000565298 TMPOP42166 694 aaKnown RBP23.11■■□□□ 1.29
IFT140-206ENST00000565298 SART3Q15020 963 aaKnown RBP23.11■■□□□ 1.29
IFT140-206ENST00000565298 CCDC57Q2TAC2 916 aa23.11■■□□□ 1.29
IFT140-206ENST00000565298 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
IFT140-206ENST00000565298 ATF7IPQ6VMQ6 1270 aa23.11■■□□□ 1.29
IFT140-206ENST00000565298 KRT28Q7Z3Y7 464 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 A2MP01023 1474 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 RAPGEF6Q8TEU7 1601 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 FYB1O15117 783 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 ADAMTS2O95450 1211 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 PSMA5P28066 241 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 TSHZ2Q9NRE2 1034 aa23.1■■□□□ 1.29
IFT140-206ENST00000565298 TMOD3Q9NYL9 352 aa23.09■■□□□ 1.29
IFT140-206ENST00000565298 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
IFT140-206ENST00000565298 SLC3A2P08195 630 aaKnown RBP23.09■■□□□ 1.29
IFT140-206ENST00000565298 DDX49Q9Y6V7 483 aaKnown RBP23.09■■□□□ 1.29
IFT140-206ENST00000565298 SKOR2Q2VWA4 1001 aaPredicted RBP23.08■■□□□ 1.29
IFT140-206ENST00000565298 DNAJC2Q99543 621 aaKnown RBP23.08■■□□□ 1.28
IFT140-206ENST00000565298 SCAF11Q99590 1463 aaKnown RBP23.07■■□□□ 1.28
IFT140-206ENST00000565298 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.07■■□□□ 1.28
IFT140-206ENST00000565298 CEP89Q96ST8 783 aa23.06■■□□□ 1.28
IFT140-206ENST00000565298 ZNF652Q9Y2D9 606 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms