RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 KRT28Q7Z3Y7 464 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 DEFB132Q7Z7B7 95 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 PRAM1Q96QH2 718 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 USP32Q8NFA0 1604 aa22.6■■□□□ 1.21
THUMPD1-203ENST00000565248 PSME1Q06323 249 aa22.59■■□□□ 1.21
THUMPD1-203ENST00000565248 CCDC9Q9Y3X0 531 aaKnown RBP22.59■■□□□ 1.21
THUMPD1-203ENST00000565248 VPS72Q15906 364 aa22.58■■□□□ 1.21
THUMPD1-203ENST00000565248 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
THUMPD1-203ENST00000565248 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
THUMPD1-203ENST00000565248 KRT27Q7Z3Y8 459 aa22.55■■□□□ 1.2
THUMPD1-203ENST00000565248 NWD2Q9ULI1 1742 aa22.54■■□□□ 1.2
THUMPD1-203ENST00000565248 LRP5O75197 1615 aa22.54■■□□□ 1.2
THUMPD1-203ENST00000565248 SAFB2Q14151 953 aaKnown RBP eCLIP22.54■■□□□ 1.2
THUMPD1-203ENST00000565248 PIAS4Q8N2W9 510 aaPredicted RBP22.54■■□□□ 1.2
THUMPD1-203ENST00000565248 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
THUMPD1-203ENST00000565248 BAG6P46379 1132 aa22.53■■□□□ 1.2
THUMPD1-203ENST00000565248 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
THUMPD1-203ENST00000565248 TNS3Q68CZ2 1445 aa22.53■■□□□ 1.2
THUMPD1-203ENST00000565248 LMOD2Q6P5Q4 547 aa22.52■■□□□ 1.2
THUMPD1-203ENST00000565248 PHF8Q9UPP1 1060 aa22.52■■□□□ 1.2
THUMPD1-203ENST00000565248 PLEKHH1Q9ULM0 1364 aa22.51■■□□□ 1.19
THUMPD1-203ENST00000565248 A0A0G2JS52 829 aa22.51■■□□□ 1.19
THUMPD1-203ENST00000565248 MYT1Q01538 1121 aa22.51■■□□□ 1.19
THUMPD1-203ENST00000565248 PLCH1Q4KWH8 1693 aa22.51■■□□□ 1.19
THUMPD1-203ENST00000565248 MINK1Q8N4C8 1332 aaPredicted RBP22.51■■□□□ 1.19
THUMPD1-203ENST00000565248 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
THUMPD1-203ENST00000565248 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
THUMPD1-203ENST00000565248 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
THUMPD1-203ENST00000565248 SBNO1A3KN83 1393 aa22.49■■□□□ 1.19
THUMPD1-203ENST00000565248 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
THUMPD1-203ENST00000565248 TULP4Q9NRJ4 1543 aa22.47■■□□□ 1.19
THUMPD1-203ENST00000565248 PSDA5PKW4 1024 aaPredicted RBP22.45■■□□□ 1.18
THUMPD1-203ENST00000565248 ANP32CO43423 234 aa22.45■■□□□ 1.18
THUMPD1-203ENST00000565248 SRPK2P78362 688 aaKnown RBP22.45■■□□□ 1.18
THUMPD1-203ENST00000565248 ABCA3Q99758 1704 aa22.43■■□□□ 1.18
THUMPD1-203ENST00000565248 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
THUMPD1-203ENST00000565248 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
THUMPD1-203ENST00000565248 FAM98CQ17RN3 349 aaKnown RBP22.42■■□□□ 1.18
THUMPD1-203ENST00000565248 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
THUMPD1-203ENST00000565248 WASLO00401 505 aaPredicted RBP22.4■■□□□ 1.18
THUMPD1-203ENST00000565248 CABP2Q9NPB3 220 aa22.4■■□□□ 1.18
THUMPD1-203ENST00000565248 ADGRB2O60241 1585 aa22.39■■□□□ 1.18
THUMPD1-203ENST00000565248 TMC1Q8TDI8 760 aa22.39■■□□□ 1.17
THUMPD1-203ENST00000565248 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
THUMPD1-203ENST00000565248 RGPD1P0DJD0 1748 aa22.39■■□□□ 1.17
THUMPD1-203ENST00000565248 MIER1Q8N108 512 aa22.38■■□□□ 1.17
THUMPD1-203ENST00000565248 PANK3Q9H999 370 aa22.38■■□□□ 1.17
THUMPD1-203ENST00000565248 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
THUMPD1-203ENST00000565248 ANKARQ7Z5J8 1434 aa22.37■■□□□ 1.17
THUMPD1-203ENST00000565248 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
THUMPD1-203ENST00000565248 MYOM1P52179 1685 aa22.36■■□□□ 1.17
THUMPD1-203ENST00000565248 EN1Q05925 392 aaPredicted RBP22.36■■□□□ 1.17
THUMPD1-203ENST00000565248 COL14A1Q05707 1796 aaKnown RBP22.35■■□□□ 1.17
THUMPD1-203ENST00000565248 KNSTRNQ9Y448 316 aa22.34■■□□□ 1.17
THUMPD1-203ENST00000565248 R3HDM1Q15032 1099 aaKnown RBP22.33■■□□□ 1.17
THUMPD1-203ENST00000565248 TERF2IPQ9NYB0 399 aa22.32■■□□□ 1.16
THUMPD1-203ENST00000565248 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
THUMPD1-203ENST00000565248 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
THUMPD1-203ENST00000565248 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
THUMPD1-203ENST00000565248 TRPM3Q9HCF6 1732 aaPredicted RBP22.3■■□□□ 1.16
THUMPD1-203ENST00000565248 DISP2A7MBM2 1401 aa22.3■■□□□ 1.16
THUMPD1-203ENST00000565248 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
THUMPD1-203ENST00000565248 ANKRD36BQ8N2N9 1353 aa22.29■■□□□ 1.16
THUMPD1-203ENST00000565248 FAM182BQ5T319 152 aa22.29■■□□□ 1.16
THUMPD1-203ENST00000565248 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
THUMPD1-203ENST00000565248 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
THUMPD1-203ENST00000565248 ALS2Q96Q42 1657 aa22.28■■□□□ 1.16
THUMPD1-203ENST00000565248 PER1O15534 1290 aaPredicted RBP22.28■■□□□ 1.16
THUMPD1-203ENST00000565248 CCDC61Q9Y6R9 512 aa22.28■■□□□ 1.16
THUMPD1-203ENST00000565248 PRKRIP1Q9H875 184 aaPredicted RBP22.27■■□□□ 1.16
THUMPD1-203ENST00000565248 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
THUMPD1-203ENST00000565248 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
THUMPD1-203ENST00000565248 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
THUMPD1-203ENST00000565248 ATP7BP35670 1465 aa22.26■■□□□ 1.15
THUMPD1-203ENST00000565248 PPIP5K1Q6PFW1 1433 aa22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 RALBP1Q15311 655 aa22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 EZH2Q15910 746 aaKnown RBP22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 FAM196AQ6ZSG2 479 aa22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 TNS1Q9HBL0 1735 aaKnown RBP22.25■■□□□ 1.15
THUMPD1-203ENST00000565248 THSD7AQ9UPZ6 1657 aa22.24■■□□□ 1.15
THUMPD1-203ENST00000565248 NPC1L1Q9UHC9 1359 aa22.24■■□□□ 1.15
THUMPD1-203ENST00000565248 TRIM37O94972 964 aa22.23■■□□□ 1.15
THUMPD1-203ENST00000565248 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
THUMPD1-203ENST00000565248 PARD3Q8TEW0 1356 aa22.22■■□□□ 1.15
THUMPD1-203ENST00000565248 CAMKK2Q96RR4 588 aa22.21■■□□□ 1.15
THUMPD1-203ENST00000565248 PRR36Q9H6K5 1346 aa22.21■■□□□ 1.15
THUMPD1-203ENST00000565248 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
THUMPD1-203ENST00000565248 APBA3O96018 575 aa22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 CNGB1Q14028 1251 aaPredicted RBP22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 CARD14Q9BXL6 1004 aa22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 SPATA31A1Q5TZJ5 1347 aa22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 ITSN1Q15811 1721 aa22.2■■□□□ 1.14
THUMPD1-203ENST00000565248 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
THUMPD1-203ENST00000565248 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
THUMPD1-203ENST00000565248 PLEKHG3A1L390 1219 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms