RNA–Protein interactions for RNA: ENST00000565018.6

TCF4-226, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-226ENST00000565018 PTCH1Q13635 1447 aa11.97□□□□□ -0.49
TCF4-226ENST00000565018 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.49
TCF4-226ENST00000565018 LTKP29376 864 aa11.96□□□□□ -0.49
TCF4-226ENST00000565018 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
TCF4-226ENST00000565018 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.5
TCF4-226ENST00000565018 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
TCF4-226ENST00000565018 ITSN1Q15811 1721 aa11.95□□□□□ -0.5
TCF4-226ENST00000565018 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.95□□□□□ -0.5
TCF4-226ENST00000565018 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
TCF4-226ENST00000565018 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
TCF4-226ENST00000565018 TBX22Q9Y458 520 aa11.94□□□□□ -0.5
TCF4-226ENST00000565018 EID1Q9Y6B2 187 aa11.94□□□□□ -0.5
TCF4-226ENST00000565018 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
TCF4-226ENST00000565018 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
TCF4-226ENST00000565018 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
TCF4-226ENST00000565018 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
TCF4-226ENST00000565018 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
TCF4-226ENST00000565018 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
TCF4-226ENST00000565018 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
TCF4-226ENST00000565018 PTPRUQ92729 1446 aa11.93□□□□□ -0.5
TCF4-226ENST00000565018 PLIN1O60240 522 aa11.93□□□□□ -0.5
TCF4-226ENST00000565018 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
TCF4-226ENST00000565018 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
TCF4-226ENST00000565018 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
TCF4-226ENST00000565018 DIAPH1O60610 1272 aaKnown RBP11.92□□□□□ -0.5
TCF4-226ENST00000565018 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
TCF4-226ENST00000565018 XRN1Q8IZH2 1706 aaKnown RBP11.92□□□□□ -0.5
TCF4-226ENST00000565018 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
TCF4-226ENST00000565018 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
TCF4-226ENST00000565018 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
TCF4-226ENST00000565018 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
TCF4-226ENST00000565018 IL16Q14005 1332 aa11.91□□□□□ -0.5
TCF4-226ENST00000565018 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
TCF4-226ENST00000565018 CEP170BQ9Y4F5 1589 aaPredicted RBP11.91□□□□□ -0.5
TCF4-226ENST00000565018 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
TCF4-226ENST00000565018 RIMS1Q86UR5 1692 aaKnown RBP11.9□□□□□ -0.5
TCF4-226ENST00000565018 FCHSD2O94868 740 aa11.9□□□□□ -0.5
TCF4-226ENST00000565018 C20orf194Q5TEA3 1177 aa11.9□□□□□ -0.5
TCF4-226ENST00000565018 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
TCF4-226ENST00000565018 MAP2P11137 1827 aaKnown RBP11.9□□□□□ -0.5
TCF4-226ENST00000565018 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
TCF4-226ENST00000565018 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
TCF4-226ENST00000565018 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
TCF4-226ENST00000565018 LRRC7Q96NW7 1537 aa11.89□□□□□ -0.51
TCF4-226ENST00000565018 TMPOP42166 694 aaKnown RBP11.89□□□□□ -0.51
TCF4-226ENST00000565018 AAMPQ13685 434 aa11.89□□□□□ -0.51
TCF4-226ENST00000565018 NALCNQ8IZF0 1738 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 MS4A1P11836 297 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
TCF4-226ENST00000565018 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
TCF4-226ENST00000565018 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
TCF4-226ENST00000565018 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
TCF4-226ENST00000565018 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
TCF4-226ENST00000565018 COG3Q96JB2 828 aa11.87□□□□□ -0.51
TCF4-226ENST00000565018 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
TCF4-226ENST00000565018 USP6P35125 1406 aa11.87□□□□□ -0.51
TCF4-226ENST00000565018 BCAR3O75815 825 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 NEUROD2Q15784 382 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 CENPQQ7L2Z9 268 aaPredicted RBP11.86□□□□□ -0.51
TCF4-226ENST00000565018 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 NME9Q86XW9 330 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
TCF4-226ENST00000565018 TTC21BQ7Z4L5 1316 aa11.85□□□□□ -0.51
TCF4-226ENST00000565018 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
TCF4-226ENST00000565018 IL13P35225 146 aa11.85□□□□□ -0.51
TCF4-226ENST00000565018 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
TCF4-226ENST00000565018 ACEP12821 1306 aa11.84□□□□□ -0.51
TCF4-226ENST00000565018 TTC21AQ8NDW8 1320 aa11.84□□□□□ -0.51
TCF4-226ENST00000565018 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.51
TCF4-226ENST00000565018 USP54Q70EL1 1684 aa11.83□□□□□ -0.52
TCF4-226ENST00000565018 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
TCF4-226ENST00000565018 RIPK4P57078 832 aa11.82□□□□□ -0.52
TCF4-226ENST00000565018 FMN2Q9NZ56 1722 aa11.82□□□□□ -0.52
TCF4-226ENST00000565018 NEFMP07197 916 aa11.82□□□□□ -0.52
TCF4-226ENST00000565018 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
TCF4-226ENST00000565018 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
TCF4-226ENST00000565018 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
TCF4-226ENST00000565018 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
TCF4-226ENST00000565018 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
TCF4-226ENST00000565018 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
TCF4-226ENST00000565018 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
TCF4-226ENST00000565018 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
TCF4-226ENST00000565018 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
TCF4-226ENST00000565018 FBLN1P23142 703 aa11.79□□□□□ -0.52
TCF4-226ENST00000565018 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
TCF4-226ENST00000565018 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
TCF4-226ENST00000565018 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
TCF4-226ENST00000565018 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
TCF4-226ENST00000565018 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
TCF4-226ENST00000565018 LMOD3Q0VAK6 560 aa11.78□□□□□ -0.52
TCF4-226ENST00000565018 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
TCF4-226ENST00000565018 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
TCF4-226ENST00000565018 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
TCF4-226ENST00000565018 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms