RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KANK1Q14678 1352 aa25.54■■□□□ 1.68
MAP1LC3B-206ENST00000564844 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
MAP1LC3B-206ENST00000564844 DDIT3P35638 169 aa25.53■■□□□ 1.68
MAP1LC3B-206ENST00000564844 NOS1P29475 1434 aa25.53■■□□□ 1.68
MAP1LC3B-206ENST00000564844 SRPK2P78362 688 aaKnown RBP25.53■■□□□ 1.68
MAP1LC3B-206ENST00000564844 CCDC27Q2M243 656 aa25.53■■□□□ 1.68
MAP1LC3B-206ENST00000564844 CAVIN1Q6NZI2 390 aaKnown RBP25.52■■□□□ 1.68
MAP1LC3B-206ENST00000564844 PKP1Q13835 747 aa25.52■■□□□ 1.68
MAP1LC3B-206ENST00000564844 AK9Q5TCS8 1911 aa25.51■■□□□ 1.67
MAP1LC3B-206ENST00000564844 K7ELQ4 463 aaPredicted RBP25.51■■□□□ 1.67
MAP1LC3B-206ENST00000564844 TPRNQ4KMQ1 711 aa25.51■■□□□ 1.67
MAP1LC3B-206ENST00000564844 PLXNC1O60486 1568 aa25.51■■□□□ 1.67
MAP1LC3B-206ENST00000564844 ANP32BQ92688 251 aaKnown RBP25.5■■□□□ 1.67
MAP1LC3B-206ENST00000564844 ATAD2Q6PL18 1390 aa25.49■■□□□ 1.67
MAP1LC3B-206ENST00000564844 STAC3Q96MF2 364 aa25.49■■□□□ 1.67
MAP1LC3B-206ENST00000564844 FAM13BQ9NYF5 915 aa25.49■■□□□ 1.67
MAP1LC3B-206ENST00000564844 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
MAP1LC3B-206ENST00000564844 SNX21Q969T3 373 aa25.48■■□□□ 1.67
MAP1LC3B-206ENST00000564844 R3HCC1Q9Y3T6 440 aaKnown RBP25.48■■□□□ 1.67
MAP1LC3B-206ENST00000564844 MSNP26038 577 aaKnown RBP25.48■■□□□ 1.67
MAP1LC3B-206ENST00000564844 TRPM2O94759 1503 aa25.48■■□□□ 1.67
MAP1LC3B-206ENST00000564844 HMOX1P09601 288 aa25.48■■□□□ 1.67
MAP1LC3B-206ENST00000564844 SPHKAPQ2M3C7 1700 aa25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 GOLGA6L22H0YM25 854 aa25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 RBM27Q9P2N5 1060 aaKnown RBP25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 ZNF518AQ6AHZ1 1483 aa25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 PLCH2O75038 1416 aa25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 IPO8O15397 1037 aaKnown RBP25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 BAG4O95429 457 aaKnown RBP25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 MPNDQ8N594 471 aa25.47■■□□□ 1.67
MAP1LC3B-206ENST00000564844 TSPYL6Q8N831 410 aa25.46■■□□□ 1.67
MAP1LC3B-206ENST00000564844 CD109Q6YHK3 1445 aa25.46■■□□□ 1.67
MAP1LC3B-206ENST00000564844 SHPRHQ149N8 1683 aa25.46■■□□□ 1.67
MAP1LC3B-206ENST00000564844 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
MAP1LC3B-206ENST00000564844 PLEKHF1Q96S99 279 aa25.45■■□□□ 1.66
MAP1LC3B-206ENST00000564844 XPCQ01831 940 aaPredicted RBP25.45■■□□□ 1.66
MAP1LC3B-206ENST00000564844 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
MAP1LC3B-206ENST00000564844 SKOR2Q2VWA4 1001 aaPredicted RBP25.44■■□□□ 1.66
MAP1LC3B-206ENST00000564844 FOXD4L6Q3SYB3 417 aaPredicted RBP25.44■■□□□ 1.66
MAP1LC3B-206ENST00000564844 FOXD4L3Q6VB84 417 aaPredicted RBP25.44■■□□□ 1.66
MAP1LC3B-206ENST00000564844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.43■■□□□ 1.66
MAP1LC3B-206ENST00000564844 BMP2KLQ5H9B9 411 aa25.43■■□□□ 1.66
MAP1LC3B-206ENST00000564844 ZMYM3Q14202 1370 aa25.42■■□□□ 1.66
MAP1LC3B-206ENST00000564844 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
MAP1LC3B-206ENST00000564844 PRPF40AO75400 957 aaKnown RBP25.41■■□□□ 1.66
MAP1LC3B-206ENST00000564844 ZSCAN30Q86W11 494 aa25.41■■□□□ 1.66
MAP1LC3B-206ENST00000564844 CIZ1Q9ULV3 898 aaPredicted RBP25.41■■□□□ 1.66
MAP1LC3B-206ENST00000564844 SIRT2Q8IXJ6 389 aa25.4■■□□□ 1.66
MAP1LC3B-206ENST00000564844 CALD1Q05682 793 aaKnown RBP25.4■■□□□ 1.66
MAP1LC3B-206ENST00000564844 CCDC173Q0VFZ6 552 aa25.4■■□□□ 1.66
MAP1LC3B-206ENST00000564844 RNF214Q8ND24 703 aa25.4■■□□□ 1.66
MAP1LC3B-206ENST00000564844 NCOA3Q9Y6Q9 1424 aa25.39■■□□□ 1.66
MAP1LC3B-206ENST00000564844 ZGPATQ8N5A5 531 aaKnown RBP25.39■■□□□ 1.66
MAP1LC3B-206ENST00000564844 KIF16BQ96L93 1317 aa25.39■■□□□ 1.66
MAP1LC3B-206ENST00000564844 PRKAR2BP31323 418 aa25.39■■□□□ 1.65
MAP1LC3B-206ENST00000564844 OTUD7AQ8TE49 926 aaPredicted RBP25.39■■□□□ 1.65
MAP1LC3B-206ENST00000564844 ZBTB7BO15156 539 aaPredicted RBP25.38■■□□□ 1.65
MAP1LC3B-206ENST00000564844 NOL8Q76FK4 1167 aaKnown RBP25.38■■□□□ 1.65
MAP1LC3B-206ENST00000564844 RBSNQ9H1K0 784 aa25.38■■□□□ 1.65
MAP1LC3B-206ENST00000564844 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
MAP1LC3B-206ENST00000564844 C14orf93Q9H972 538 aaKnown RBP25.38■■□□□ 1.65
MAP1LC3B-206ENST00000564844 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
MAP1LC3B-206ENST00000564844 DIAPH1O60610 1272 aaKnown RBP25.37■■□□□ 1.65
MAP1LC3B-206ENST00000564844 ISY1Q9ULR0 285 aaKnown RBP25.37■■□□□ 1.65
MAP1LC3B-206ENST00000564844 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
MAP1LC3B-206ENST00000564844 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
MAP1LC3B-206ENST00000564844 GSPT1P15170 499 aaKnown RBP25.35■■□□□ 1.65
MAP1LC3B-206ENST00000564844 SMARCA5O60264 1052 aaPredicted RBP25.35■■□□□ 1.65
MAP1LC3B-206ENST00000564844 ZSCAN23Q3MJ62 389 aa25.35■■□□□ 1.65
MAP1LC3B-206ENST00000564844 FYB1O15117 783 aa25.34■■□□□ 1.65
MAP1LC3B-206ENST00000564844 TPM2P07951 284 aa25.34■■□□□ 1.65
MAP1LC3B-206ENST00000564844 CT47B1P0C2W7 299 aaPredicted RBP25.34■■□□□ 1.65
MAP1LC3B-206ENST00000564844 KLHL40Q2TBA0 621 aa25.34■■□□□ 1.65
MAP1LC3B-206ENST00000564844 MAP3K4Q9Y6R4 1608 aa25.33■■□□□ 1.65
MAP1LC3B-206ENST00000564844 DCTN1Q14203 1278 aa25.33■■□□□ 1.64
MAP1LC3B-206ENST00000564844 CDC45O75419 566 aa25.32■■□□□ 1.64
MAP1LC3B-206ENST00000564844 NSFL1CQ9UNZ2 370 aaKnown RBP25.32■■□□□ 1.64
MAP1LC3B-206ENST00000564844 PPP1R9BQ96SB3 815 aa25.31■■□□□ 1.64
MAP1LC3B-206ENST00000564844 A0A1W2PP64 1363 aa25.3■■□□□ 1.64
MAP1LC3B-206ENST00000564844 SYCE3A1L190 88 aa25.3■■□□□ 1.64
MAP1LC3B-206ENST00000564844 FAM83GA6ND36 823 aa25.3■■□□□ 1.64
MAP1LC3B-206ENST00000564844 PDCL3Q9H2J4 239 aa25.3■■□□□ 1.64
MAP1LC3B-206ENST00000564844 OFD1O75665 1012 aa25.29■■□□□ 1.64
MAP1LC3B-206ENST00000564844 ABCC1P33527 1531 aa25.29■■□□□ 1.64
MAP1LC3B-206ENST00000564844 VAMP4O75379 141 aa25.28■■□□□ 1.64
MAP1LC3B-206ENST00000564844 GCC1Q96CN9 775 aa25.28■■□□□ 1.64
MAP1LC3B-206ENST00000564844 LMBRD1Q9NUN5 540 aa25.28■■□□□ 1.64
MAP1LC3B-206ENST00000564844 JARID2Q92833 1246 aaPredicted RBP25.28■■□□□ 1.64
MAP1LC3B-206ENST00000564844 ANKRD36BQ8N2N9 1353 aa25.27■■□□□ 1.64
MAP1LC3B-206ENST00000564844 SOX12O15370 315 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PLEKHM2Q8IWE5 1019 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 GPT2Q8TD30 523 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 ABCC11Q96J66 1382 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 KRT24Q2M2I5 525 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 C8orf58Q8NAV2 365 aa25.26■■□□□ 1.63
MAP1LC3B-206ENST00000564844 UQCRHLA0A096LP55 91 aa25.25■■□□□ 1.63
MAP1LC3B-206ENST00000564844 UQCRHP07919 91 aa25.25■■□□□ 1.63
MAP1LC3B-206ENST00000564844 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
MAP1LC3B-206ENST00000564844 TSHZ3Q63HK5 1081 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms