RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 SRPK2P78362 688 aaKnown RBP23.68■■□□□ 1.38
AC004449.1-201ENST00000564240 CCDC61Q9Y6R9 512 aa23.68■■□□□ 1.38
AC004449.1-201ENST00000564240 NWD2Q9ULI1 1742 aa23.67■■□□□ 1.38
AC004449.1-201ENST00000564240 NBPF8Q3BBV2 869 aa23.67■■□□□ 1.38
AC004449.1-201ENST00000564240 BLMP54132 1417 aaPredicted RBP23.67■■□□□ 1.38
AC004449.1-201ENST00000564240 ACEP12821 1306 aa23.66■■□□□ 1.38
AC004449.1-201ENST00000564240 DEFB132Q7Z7B7 95 aa23.66■■□□□ 1.38
AC004449.1-201ENST00000564240 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
AC004449.1-201ENST00000564240 TRPM3Q9HCF6 1732 aaPredicted RBP23.66■■□□□ 1.38
AC004449.1-201ENST00000564240 ABCA3Q99758 1704 aa23.65■■□□□ 1.38
AC004449.1-201ENST00000564240 ZC3H6P61129 1189 aaKnown RBP23.65■■□□□ 1.38
AC004449.1-201ENST00000564240 STRN4Q9NRL3 753 aa23.65■■□□□ 1.38
AC004449.1-201ENST00000564240 BRWD3Q6RI45 1802 aa23.65■■□□□ 1.38
AC004449.1-201ENST00000564240 CHRNA2Q15822 529 aa23.64■■□□□ 1.37
AC004449.1-201ENST00000564240 EVA1CP58658 441 aa23.63■■□□□ 1.37
AC004449.1-201ENST00000564240 ABTB2Q8N961 1025 aa23.63■■□□□ 1.37
AC004449.1-201ENST00000564240 ALS2Q96Q42 1657 aa23.63■■□□□ 1.37
AC004449.1-201ENST00000564240 NEUROD1Q13562 356 aa23.62■■□□□ 1.37
AC004449.1-201ENST00000564240 ATP7BP35670 1465 aa23.62■■□□□ 1.37
AC004449.1-201ENST00000564240 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
AC004449.1-201ENST00000564240 CENPJQ9HC77 1338 aaPredicted RBP23.61■■□□□ 1.37
AC004449.1-201ENST00000564240 COL14A1Q05707 1796 aaKnown RBP23.61■■□□□ 1.37
AC004449.1-201ENST00000564240 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
AC004449.1-201ENST00000564240 SPATA31A5Q5VU36 1347 aa23.6■■□□□ 1.37
AC004449.1-201ENST00000564240 SPATA31A7Q8IWB4 1347 aa23.6■■□□□ 1.37
AC004449.1-201ENST00000564240 CABP2Q9NPB3 220 aa23.6■■□□□ 1.37
AC004449.1-201ENST00000564240 KIAA0232Q92628 1395 aa23.6■■□□□ 1.37
AC004449.1-201ENST00000564240 BAG6P46379 1132 aa23.59■■□□□ 1.37
AC004449.1-201ENST00000564240 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
AC004449.1-201ENST00000564240 FAM182BQ5T319 152 aa23.58■■□□□ 1.37
AC004449.1-201ENST00000564240 SIN3AQ96ST3 1273 aa23.58■■□□□ 1.37
AC004449.1-201ENST00000564240 USP35Q9P2H5 1018 aa23.58■■□□□ 1.37
AC004449.1-201ENST00000564240 KIAA1210Q9ULL0 1709 aa23.58■■□□□ 1.37
AC004449.1-201ENST00000564240 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
AC004449.1-201ENST00000564240 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
AC004449.1-201ENST00000564240 ZBTB7CA1YPR0 619 aa23.55■■□□□ 1.36
AC004449.1-201ENST00000564240 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
AC004449.1-201ENST00000564240 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
AC004449.1-201ENST00000564240 CABP1Q9NZU7 370 aa23.53■■□□□ 1.36
AC004449.1-201ENST00000564240 SPATA31A1Q5TZJ5 1347 aa23.52■■□□□ 1.36
AC004449.1-201ENST00000564240 EVC2Q86UK5 1308 aa23.5■■□□□ 1.35
AC004449.1-201ENST00000564240 GCP02774 474 aa23.49■■□□□ 1.35
AC004449.1-201ENST00000564240 NLRP6P59044 892 aa23.49■■□□□ 1.35
AC004449.1-201ENST00000564240 EN1Q05925 392 aaPredicted RBP23.49■■□□□ 1.35
AC004449.1-201ENST00000564240 PDE3BQ13370 1112 aa23.49■■□□□ 1.35
AC004449.1-201ENST00000564240 EP400Q96L91 3159 aa23.47■■□□□ 1.35
AC004449.1-201ENST00000564240 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
AC004449.1-201ENST00000564240 LARP1Q6PKG0 1096 aaKnown RBP23.46■■□□□ 1.35
AC004449.1-201ENST00000564240 FAM196AQ6ZSG2 479 aa23.46■■□□□ 1.35
AC004449.1-201ENST00000564240 TOPAZ1Q8N9V7 1692 aa23.45■■□□□ 1.34
AC004449.1-201ENST00000564240 ROCK2O75116 1388 aaKnown RBP23.45■■□□□ 1.34
AC004449.1-201ENST00000564240 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
AC004449.1-201ENST00000564240 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
AC004449.1-201ENST00000564240 TRIM37O94972 964 aa23.44■■□□□ 1.34
AC004449.1-201ENST00000564240 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
AC004449.1-201ENST00000564240 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
AC004449.1-201ENST00000564240 BRD4O60885 1362 aaPredicted RBP23.42■■□□□ 1.34
AC004449.1-201ENST00000564240 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
AC004449.1-201ENST00000564240 USP19O94966 1318 aa23.42■■□□□ 1.34
AC004449.1-201ENST00000564240 BARGINQ6ZT62 677 aa23.42■■□□□ 1.34
AC004449.1-201ENST00000564240 APBA3O96018 575 aa23.41■■□□□ 1.34
AC004449.1-201ENST00000564240 CPDO75976 1380 aa23.4■■□□□ 1.34
AC004449.1-201ENST00000564240 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
AC004449.1-201ENST00000564240 EZH2Q15910 746 aaKnown RBP23.39■■□□□ 1.33
AC004449.1-201ENST00000564240 CAMTA1Q9Y6Y1 1673 aa23.38■■□□□ 1.33
AC004449.1-201ENST00000564240 SOX12O15370 315 aa23.38■■□□□ 1.33
AC004449.1-201ENST00000564240 THRAP3Q9Y2W1 955 aaKnown RBP23.38■■□□□ 1.33
AC004449.1-201ENST00000564240 USP6P35125 1406 aa23.38■■□□□ 1.33
AC004449.1-201ENST00000564240 NRKQ7Z2Y5 1582 aa23.36■■□□□ 1.33
AC004449.1-201ENST00000564240 THSD7AQ9UPZ6 1657 aa23.36■■□□□ 1.33
AC004449.1-201ENST00000564240 TOM1L2Q6ZVM7 507 aa23.36■■□□□ 1.33
AC004449.1-201ENST00000564240 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
AC004449.1-201ENST00000564240 R3HDM1Q15032 1099 aaKnown RBP23.35■■□□□ 1.33
AC004449.1-201ENST00000564240 CARD11Q9BXL7 1154 aa23.34■■□□□ 1.33
AC004449.1-201ENST00000564240 TTC21BQ7Z4L5 1316 aa23.33■■□□□ 1.33
AC004449.1-201ENST00000564240 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
AC004449.1-201ENST00000564240 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.32
AC004449.1-201ENST00000564240 CSB-PGBD3P0DP91 1061 aa23.32■■□□□ 1.32
AC004449.1-201ENST00000564240 CAMKK2Q96RR4 588 aa23.32■■□□□ 1.32
AC004449.1-201ENST00000564240 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
AC004449.1-201ENST00000564240 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
AC004449.1-201ENST00000564240 KTN1Q86UP2 1357 aaKnown RBP23.29■■□□□ 1.32
AC004449.1-201ENST00000564240 CRB1P82279 1406 aa23.29■■□□□ 1.32
AC004449.1-201ENST00000564240 COL5A2P05997 1499 aaPredicted RBP23.29■■□□□ 1.32
AC004449.1-201ENST00000564240 TTC21AQ8NDW8 1320 aa23.29■■□□□ 1.32
AC004449.1-201ENST00000564240 DDB1Q16531 1140 aa23.28■■□□□ 1.32
AC004449.1-201ENST00000564240 NBPF14Q5TI25 921 aa23.28■■□□□ 1.32
AC004449.1-201ENST00000564240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.28■■□□□ 1.32
AC004449.1-201ENST00000564240 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
AC004449.1-201ENST00000564240 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
AC004449.1-201ENST00000564240 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
AC004449.1-201ENST00000564240 AXIN2Q9Y2T1 843 aa23.27■■□□□ 1.32
AC004449.1-201ENST00000564240 DISP2A7MBM2 1401 aa23.26■■□□□ 1.31
AC004449.1-201ENST00000564240 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
AC004449.1-201ENST00000564240 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
AC004449.1-201ENST00000564240 WDR17Q8IZU2 1322 aa23.24■■□□□ 1.31
AC004449.1-201ENST00000564240 SLIT3O75094 1523 aa23.23■■□□□ 1.31
AC004449.1-201ENST00000564240 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
AC004449.1-201ENST00000564240 TNS1Q9HBL0 1735 aaKnown RBP23.22■■□□□ 1.31
AC004449.1-201ENST00000564240 CDCA7Q9BWT1 371 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms