RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 DNAJB2P25686 324 aa9.34□□□□□ -0.91
TCF4-220ENST00000563824 NUDT18Q6ZVK8 323 aa9.34□□□□□ -0.91
TCF4-220ENST00000563824 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
TCF4-220ENST00000563824 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
TCF4-220ENST00000563824 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
TCF4-220ENST00000563824 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
TCF4-220ENST00000563824 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
TCF4-220ENST00000563824 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
TCF4-220ENST00000563824 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
TCF4-220ENST00000563824 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 ANKRD13DQ6ZTN6 518 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 PACS2Q86VP3 889 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 C1orf115Q9H7X2 142 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 REREQ9P2R6 1566 aa9.32□□□□□ -0.92
TCF4-220ENST00000563824 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 EYA1Q99502 592 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 C3P01024 1663 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 AGLP35573 1532 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 NPATQ14207 1427 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
TCF4-220ENST00000563824 PLA2R1Q13018 1463 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 TRAK2O60296 914 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 CD46P15529 392 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 HSPA1LP34931 641 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 RFC5P40937 340 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 RIC3Q7Z5B4 369 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
TCF4-220ENST00000563824 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 TATDN2Q93075 761 aa9.3□□□□□ -0.92
TCF4-220ENST00000563824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.3□□□□□ -0.92
TCF4-220ENST00000563824 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
TCF4-220ENST00000563824 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
TCF4-220ENST00000563824 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
TCF4-220ENST00000563824 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
TCF4-220ENST00000563824 LIMD1Q9UGP4 676 aa9.29□□□□□ -0.92
TCF4-220ENST00000563824 CAMSAP1Q5T5Y3 1602 aa9.29□□□□□ -0.92
TCF4-220ENST00000563824 ZNF335Q9H4Z2 1342 aaPredicted RBP9.29□□□□□ -0.92
TCF4-220ENST00000563824 ZNF518AQ6AHZ1 1483 aa9.28□□□□□ -0.92
TCF4-220ENST00000563824 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
TCF4-220ENST00000563824 PLCH2O75038 1416 aa9.28□□□□□ -0.92
TCF4-220ENST00000563824 CPS1P31327 1500 aa9.27□□□□□ -0.93
TCF4-220ENST00000563824 CSPP1Q1MSJ5 1256 aa9.27□□□□□ -0.93
TCF4-220ENST00000563824 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.93
TCF4-220ENST00000563824 PTPRKQ15262 1439 aa9.27□□□□□ -0.93
TCF4-220ENST00000563824 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.93
TCF4-220ENST00000563824 SMAPO00193 183 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 PROX2Q3B8N5 592 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 TMEM259Q4ZIN3 620 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 CCDC82Q8N4S0 544 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 BANK1Q8NDB2 785 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 POM121Q96HA1 1249 aa9.26□□□□□ -0.93
TCF4-220ENST00000563824 SAMD9Q5K651 1589 aa9.25□□□□□ -0.93
TCF4-220ENST00000563824 C3orf80F5H4A9 247 aa9.25□□□□□ -0.93
TCF4-220ENST00000563824 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
TCF4-220ENST00000563824 MROH2AA6NES4 1674 aa9.25□□□□□ -0.93
TCF4-220ENST00000563824 KDM5CP41229 1560 aa9.24□□□□□ -0.93
TCF4-220ENST00000563824 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
TCF4-220ENST00000563824 PRXQ9BXM0 1461 aa9.24□□□□□ -0.93
TCF4-220ENST00000563824 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
TCF4-220ENST00000563824 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
TCF4-220ENST00000563824 MOXD2PA6NHM9 499 aa9.23□□□□□ -0.93
TCF4-220ENST00000563824 SPTLC1O15269 473 aa9.23□□□□□ -0.93
TCF4-220ENST00000563824 PIP4K2BP78356 416 aa9.23□□□□□ -0.93
TCF4-220ENST00000563824 PPP2R2DQ66LE6 453 aa9.23□□□□□ -0.93
TCF4-220ENST00000563824 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
TCF4-220ENST00000563824 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
TCF4-220ENST00000563824 MLH3Q9UHC1 1453 aa9.22□□□□□ -0.93
TCF4-220ENST00000563824 TUSC1Q2TAM9 212 aa9.22□□□□□ -0.93
TCF4-220ENST00000563824 SNRKQ9NRH2 765 aa9.22□□□□□ -0.93
TCF4-220ENST00000563824 ZNF777Q9ULD5 760 aaPredicted RBP9.22□□□□□ -0.93
TCF4-220ENST00000563824 DIP2CQ9Y2E4 1556 aa9.21□□□□□ -0.93
TCF4-220ENST00000563824 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 NUTM2AQ8IVF1 878 aaPredicted RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 WWC1Q8IX03 1113 aa9.21□□□□□ -0.94
TCF4-220ENST00000563824 CCDC97Q96F63 343 aaPredicted RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 COG6Q9Y2V7 657 aa9.21□□□□□ -0.94
TCF4-220ENST00000563824 SUPT6HQ7KZ85 1726 aaKnown RBP9.21□□□□□ -0.94
TCF4-220ENST00000563824 MYO5CQ9NQX4 1742 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 KDM4AO75164 1064 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 NDUFV2P19404 249 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 PBX2P40425 430 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 SLC4A3P48751 1232 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
TCF4-220ENST00000563824 AP1G2O75843 785 aa9.19□□□□□ -0.94
TCF4-220ENST00000563824 GJA5P36382 358 aa9.19□□□□□ -0.94
TCF4-220ENST00000563824 QPCTQ16769 361 aa9.19□□□□□ -0.94
TCF4-220ENST00000563824 FBXO31Q5XUX0 539 aaPredicted RBP9.19□□□□□ -0.94
TCF4-220ENST00000563824 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
TCF4-220ENST00000563824 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
TCF4-220ENST00000563824 USP46P62068 366 aa9.18□□□□□ -0.94
TCF4-220ENST00000563824 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
TCF4-220ENST00000563824 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
TCF4-220ENST00000563824 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
TCF4-220ENST00000563824 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
TCF4-220ENST00000563824 CEP170BQ9Y4F5 1589 aaPredicted RBP9.17□□□□□ -0.94
TCF4-220ENST00000563824 LILRB3O75022 631 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms