RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
HDGFL3-204ENST00000563790 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
HDGFL3-204ENST00000563790 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 KIF3CO14782 793 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 CABLES1Q8TDN4 633 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
HDGFL3-204ENST00000563790 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
HDGFL3-204ENST00000563790 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
HDGFL3-204ENST00000563790 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
HDGFL3-204ENST00000563790 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
HDGFL3-204ENST00000563790 PLSCR1O15162 318 aa17.51■□□□□ 0.39
HDGFL3-204ENST00000563790 TNS3Q68CZ2 1445 aa17.51■□□□□ 0.39
HDGFL3-204ENST00000563790 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
HDGFL3-204ENST00000563790 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDGFL3-204ENST00000563790 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
HDGFL3-204ENST00000563790 PEAK1Q9H792 1746 aa17.47■□□□□ 0.39
HDGFL3-204ENST00000563790 ROBO2Q9HCK4 1378 aa17.46■□□□□ 0.39
HDGFL3-204ENST00000563790 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.39
HDGFL3-204ENST00000563790 SPATA31A1Q5TZJ5 1347 aa17.46■□□□□ 0.38
HDGFL3-204ENST00000563790 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
HDGFL3-204ENST00000563790 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
HDGFL3-204ENST00000563790 TOMM70O94826 608 aa17.43■□□□□ 0.38
HDGFL3-204ENST00000563790 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 HTRA3P83110 453 aa17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 STK32BQ9NY57 414 aa17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
HDGFL3-204ENST00000563790 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
HDGFL3-204ENST00000563790 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
HDGFL3-204ENST00000563790 PROM2Q8N271 834 aa17.41■□□□□ 0.38
HDGFL3-204ENST00000563790 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
HDGFL3-204ENST00000563790 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
HDGFL3-204ENST00000563790 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
HDGFL3-204ENST00000563790 RRP7BPQ9NSQ0 103 aa17.39■□□□□ 0.37
HDGFL3-204ENST00000563790 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
HDGFL3-204ENST00000563790 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
HDGFL3-204ENST00000563790 NLGN2Q8NFZ4 835 aa17.38■□□□□ 0.37
HDGFL3-204ENST00000563790 E9PCH4 1651 aa17.38■□□□□ 0.37
HDGFL3-204ENST00000563790 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
HDGFL3-204ENST00000563790 QSER1Q2KHR3 1735 aa17.36■□□□□ 0.37
HDGFL3-204ENST00000563790 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
HDGFL3-204ENST00000563790 TECPR2O15040 1411 aa17.36■□□□□ 0.37
HDGFL3-204ENST00000563790 MLLT1Q03111 559 aaPredicted RBP17.35■□□□□ 0.37
HDGFL3-204ENST00000563790 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
HDGFL3-204ENST00000563790 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
HDGFL3-204ENST00000563790 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
HDGFL3-204ENST00000563790 MYOM3Q5VTT5 1437 aa17.32■□□□□ 0.36
HDGFL3-204ENST00000563790 PSME1Q06323 249 aa17.32■□□□□ 0.36
HDGFL3-204ENST00000563790 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
HDGFL3-204ENST00000563790 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
HDGFL3-204ENST00000563790 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
HDGFL3-204ENST00000563790 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
HDGFL3-204ENST00000563790 NAIPQ13075 1403 aa17.3■□□□□ 0.36
HDGFL3-204ENST00000563790 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
HDGFL3-204ENST00000563790 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
HDGFL3-204ENST00000563790 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
HDGFL3-204ENST00000563790 RGS19P49795 217 aa17.28■□□□□ 0.36
HDGFL3-204ENST00000563790 LMOD2Q6P5Q4 547 aa17.28■□□□□ 0.36
HDGFL3-204ENST00000563790 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
HDGFL3-204ENST00000563790 USP19O94966 1318 aa17.27■□□□□ 0.36
HDGFL3-204ENST00000563790 TXNRD1Q16881 649 aa17.27■□□□□ 0.36
HDGFL3-204ENST00000563790 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
HDGFL3-204ENST00000563790 POLD1P28340 1107 aa17.26■□□□□ 0.35
HDGFL3-204ENST00000563790 IFT172Q9UG01 1749 aa17.26■□□□□ 0.35
HDGFL3-204ENST00000563790 ATP7BP35670 1465 aa17.24■□□□□ 0.35
HDGFL3-204ENST00000563790 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
HDGFL3-204ENST00000563790 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
HDGFL3-204ENST00000563790 CUL9Q8IWT3 2517 aa17.23■□□□□ 0.35
HDGFL3-204ENST00000563790 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
HDGFL3-204ENST00000563790 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
HDGFL3-204ENST00000563790 FSTL1Q12841 308 aa17.21■□□□□ 0.35
HDGFL3-204ENST00000563790 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.35
HDGFL3-204ENST00000563790 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
HDGFL3-204ENST00000563790 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
HDGFL3-204ENST00000563790 PRDM10Q9NQV6 1147 aa17.2■□□□□ 0.34
HDGFL3-204ENST00000563790 STRN4Q9NRL3 753 aa17.2■□□□□ 0.34
HDGFL3-204ENST00000563790 ADRA2BP18089 450 aa17.18■□□□□ 0.34
HDGFL3-204ENST00000563790 ABHD8Q96I13 439 aa17.18■□□□□ 0.34
HDGFL3-204ENST00000563790 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
HDGFL3-204ENST00000563790 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
HDGFL3-204ENST00000563790 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
HDGFL3-204ENST00000563790 KAT6BQ8WYB5 2073 aa17.16■□□□□ 0.34
HDGFL3-204ENST00000563790 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
HDGFL3-204ENST00000563790 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
HDGFL3-204ENST00000563790 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.34
HDGFL3-204ENST00000563790 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
HDGFL3-204ENST00000563790 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-204ENST00000563790 BCL9O00512 1426 aa17.14■□□□□ 0.33
HDGFL3-204ENST00000563790 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-204ENST00000563790 NMRK2Q9NPI5 230 aa17.14■□□□□ 0.33
HDGFL3-204ENST00000563790 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
HDGFL3-204ENST00000563790 THRAP3Q9Y2W1 955 aaKnown RBP17.13■□□□□ 0.33
HDGFL3-204ENST00000563790 A0A0C4DFX4 3053 aa17.13■□□□□ 0.33
HDGFL3-204ENST00000563790 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
HDGFL3-204ENST00000563790 KIF1BO60333 1816 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms