RNA–Protein interactions for RNA: ENST00000563674.1

SH2B1-209, Transcript of SH2B adaptor protein 1, human

TSL 3

Gene SH2B1, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH2B1-209	ENST00000563674	VPS72	Q15906	364 aa		32.76	■■■□□ 2.83
SH2B1-209	ENST00000563674	CABP2	Q9NPB3	220 aa		32.76	■■■□□ 2.83
SH2B1-209	ENST00000563674	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.76	■■■□□ 2.83
SH2B1-209	ENST00000563674	ALS2	Q96Q42	1657 aa		32.74	■■■□□ 2.83
SH2B1-209	ENST00000563674	EVC2	Q86UK5	1308 aa		32.74	■■■□□ 2.83
SH2B1-209	ENST00000563674	RALGAPB	Q86X10	1494 aa		32.74	■■■□□ 2.83
SH2B1-209	ENST00000563674	TONSL	Q96HA7	1378 aa		32.73	■■■□□ 2.83
SH2B1-209	ENST00000563674	TRPM1	Q7Z4N2	1603 aa		32.73	■■■□□ 2.83
SH2B1-209	ENST00000563674	ABCA3	Q99758	1704 aa		32.71	■■■□□ 2.83
SH2B1-209	ENST00000563674	PPIP5K1	Q6PFW1	1433 aa		32.71	■■■□□ 2.83
SH2B1-209	ENST00000563674	PRDM11	Q9NQV5	511 aa		32.69	■■■□□ 2.82
SH2B1-209	ENST00000563674	BTG4	Q9NY30	223 aa		32.69	■■■□□ 2.82
SH2B1-209	ENST00000563674	TOPAZ1	Q8N9V7	1692 aa		32.69	■■■□□ 2.82
SH2B1-209	ENST00000563674	QRICH2	Q9H0J4	1663 aa		32.68	■■■□□ 2.82
SH2B1-209	ENST00000563674	NWD2	Q9ULI1	1742 aa		32.68	■■■□□ 2.82
SH2B1-209	ENST00000563674	ABTB2	Q8N961	1025 aa		32.67	■■■□□ 2.82
SH2B1-209	ENST00000563674	NUTM2G	Q5VZR2	741 aa		32.66	■■■□□ 2.82
SH2B1-209	ENST00000563674	CABP1	Q9NZU7	370 aa		32.65	■■■□□ 2.82
SH2B1-209	ENST00000563674	BRD4	O60885	1362 aa	Predicted RBP	32.65	■■■□□ 2.82
SH2B1-209	ENST00000563674	PLCH1	Q4KWH8	1693 aa		32.65	■■■□□ 2.82
SH2B1-209	ENST00000563674	GLI3	P10071	1580 aa		32.64	■■■□□ 2.82
SH2B1-209	ENST00000563674	CARD11	Q9BXL7	1154 aa		32.64	■■■□□ 2.82
SH2B1-209	ENST00000563674	NLRP13	Q86W25	1043 aa		32.62	■■■□□ 2.81
SH2B1-209	ENST00000563674	SEPT12	Q8IYM1	358 aa		32.62	■■■□□ 2.81
SH2B1-209	ENST00000563674	COL14A1	Q05707	1796 aa	Known RBP	32.62	■■■□□ 2.81
SH2B1-209	ENST00000563674	CCDC125	Q86Z20	511 aa		32.61	■■■□□ 2.81
SH2B1-209	ENST00000563674		A0A0G2JS52	829 aa		32.59	■■■□□ 2.81
SH2B1-209	ENST00000563674	ONECUT3	O60422	494 aa	Predicted RBP	32.59	■■■□□ 2.81
SH2B1-209	ENST00000563674	ZC3H6	P61129	1189 aa	Known RBP	32.59	■■■□□ 2.81
SH2B1-209	ENST00000563674	MYT1	Q01538	1121 aa		32.59	■■■□□ 2.81
SH2B1-209	ENST00000563674	KIAA0232	Q92628	1395 aa		32.58	■■■□□ 2.81
SH2B1-209	ENST00000563674	ZNF692	Q9BU19	519 aa	Predicted RBP	32.55	■■■□□ 2.8
SH2B1-209	ENST00000563674	CHRNA2	Q15822	529 aa		32.54	■■■□□ 2.8
SH2B1-209	ENST00000563674	CRYBG1	Q9Y4K1	1723 aa		32.54	■■■□□ 2.8
SH2B1-209	ENST00000563674	FAM98C	Q17RN3	349 aa	Known RBP	32.53	■■■□□ 2.8
SH2B1-209	ENST00000563674	USP19	O94966	1318 aa		32.52	■■■□□ 2.8
SH2B1-209	ENST00000563674	USP6	P35125	1406 aa		32.52	■■■□□ 2.8
SH2B1-209	ENST00000563674	KRT27	Q7Z3Y8	459 aa		32.52	■■■□□ 2.8
SH2B1-209	ENST00000563674	SPATA31A5	Q5VU36	1347 aa		32.51	■■■□□ 2.79
SH2B1-209	ENST00000563674	SPATA31A7	Q8IWB4	1347 aa		32.51	■■■□□ 2.79
SH2B1-209	ENST00000563674	SBNO2	Q9Y2G9	1366 aa		32.5	■■■□□ 2.79
SH2B1-209	ENST00000563674	EVA1C	P58658	441 aa		32.5	■■■□□ 2.79
SH2B1-209	ENST00000563674	NLRP6	P59044	892 aa		32.5	■■■□□ 2.79
SH2B1-209	ENST00000563674	STRN4	Q9NRL3	753 aa		32.5	■■■□□ 2.79
SH2B1-209	ENST00000563674	NRAP	Q86VF7	1730 aa		32.5	■■■□□ 2.79
SH2B1-209	ENST00000563674	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.49	■■■□□ 2.79
SH2B1-209	ENST00000563674	GC	P02774	474 aa		32.49	■■■□□ 2.79
SH2B1-209	ENST00000563674	SF3B2	Q13435	895 aa	Known RBP	32.47	■■■□□ 2.79
SH2B1-209	ENST00000563674	CPD	O75976	1380 aa		32.46	■■■□□ 2.79
SH2B1-209	ENST00000563674	BLM	P54132	1417 aa	Predicted RBP	32.43	■■■□□ 2.78
SH2B1-209	ENST00000563674	SPATA31A1	Q5TZJ5	1347 aa		32.42	■■■□□ 2.78
SH2B1-209	ENST00000563674	NRK	Q7Z2Y5	1582 aa		32.41	■■■□□ 2.78
SH2B1-209	ENST00000563674	TTC21B	Q7Z4L5	1316 aa		32.41	■■■□□ 2.78
SH2B1-209	ENST00000563674	TTC21A	Q8NDW8	1320 aa		32.41	■■■□□ 2.78
SH2B1-209	ENST00000563674	SLC24A1	O60721	1099 aa		32.4	■■■□□ 2.78
SH2B1-209	ENST00000563674	SSH2	Q76I76	1423 aa		32.4	■■■□□ 2.78
SH2B1-209	ENST00000563674	ZBTB7C	A1YPR0	619 aa		32.39	■■■□□ 2.78
SH2B1-209	ENST00000563674	BRWD3	Q6RI45	1802 aa		32.38	■■■□□ 2.77
SH2B1-209	ENST00000563674	KTN1	Q86UP2	1357 aa	Known RBP	32.38	■■■□□ 2.77
SH2B1-209	ENST00000563674	TMC1	Q8TDI8	760 aa		32.37	■■■□□ 2.77
SH2B1-209	ENST00000563674	KCNH5	Q8NCM2	988 aa		32.36	■■■□□ 2.77
SH2B1-209	ENST00000563674	USP35	Q9P2H5	1018 aa		32.36	■■■□□ 2.77
SH2B1-209	ENST00000563674	CPSF1	Q10570	1443 aa	Known RBP	32.35	■■■□□ 2.77
SH2B1-209	ENST00000563674	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.35	■■■□□ 2.77
SH2B1-209	ENST00000563674	PUS7	Q96PZ0	661 aa	Known RBP	32.35	■■■□□ 2.77
SH2B1-209	ENST00000563674	ZRANB1	Q9UGI0	708 aa		32.34	■■■□□ 2.77
SH2B1-209	ENST00000563674	LARP1	Q6PKG0	1096 aa	Known RBP	32.33	■■■□□ 2.77
SH2B1-209	ENST00000563674	CAMTA1	Q9Y6Y1	1673 aa		32.33	■■■□□ 2.77
SH2B1-209	ENST00000563674	BARGIN	Q6ZT62	677 aa		32.32	■■■□□ 2.76
SH2B1-209	ENST00000563674	SLIT3	O75094	1523 aa		32.31	■■■□□ 2.76
SH2B1-209	ENST00000563674	EP400	Q96L91	3159 aa		32.31	■■■□□ 2.76
SH2B1-209	ENST00000563674	TCP11L2	Q8N4U5	519 aa		32.31	■■■□□ 2.76
SH2B1-209	ENST00000563674	AATK	Q6ZMQ8	1374 aa		32.31	■■■□□ 2.76
SH2B1-209	ENST00000563674	ST20-MTHFS	A0A0A6YYL1	179 aa		32.3	■■■□□ 2.76
SH2B1-209	ENST00000563674	PCGF6	Q9BYE7	350 aa		32.3	■■■□□ 2.76
SH2B1-209	ENST00000563674	TERF2IP	Q9NYB0	399 aa		32.3	■■■□□ 2.76
SH2B1-209	ENST00000563674	THRAP3	Q9Y2W1	955 aa	Known RBP	32.3	■■■□□ 2.76
SH2B1-209	ENST00000563674	AKAP12	Q02952	1782 aa		32.28	■■■□□ 2.76
SH2B1-209	ENST00000563674	TIMELESS	Q9UNS1	1208 aa		32.28	■■■□□ 2.76
SH2B1-209	ENST00000563674	CLSPN	Q9HAW4	1339 aa		32.27	■■■□□ 2.76
SH2B1-209	ENST00000563674	BAG6	P46379	1132 aa		32.27	■■■□□ 2.76
SH2B1-209	ENST00000563674	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
SH2B1-209	ENST00000563674	PIK3C2A	O00443	1686 aa		32.27	■■■□□ 2.76
SH2B1-209	ENST00000563674	LMO7	Q8WWI1	1683 aa		32.27	■■■□□ 2.76
SH2B1-209	ENST00000563674	SOX12	O15370	315 aa		32.26	■■■□□ 2.75
SH2B1-209	ENST00000563674	PDE3B	Q13370	1112 aa		32.26	■■■□□ 2.75
SH2B1-209	ENST00000563674	DEFB132	Q7Z7B7	95 aa		32.26	■■■□□ 2.75
SH2B1-209	ENST00000563674	SLC12A5	Q9H2X9	1139 aa		32.26	■■■□□ 2.75
SH2B1-209	ENST00000563674	THSD7A	Q9UPZ6	1657 aa		32.26	■■■□□ 2.75
SH2B1-209	ENST00000563674	COL5A2	P05997	1499 aa	Predicted RBP	32.25	■■■□□ 2.75
SH2B1-209	ENST00000563674	ARHGEF25	Q86VW2	580 aa		32.24	■■■□□ 2.75
SH2B1-209	ENST00000563674	TESK2	Q96S53	571 aa		32.24	■■■□□ 2.75
SH2B1-209	ENST00000563674	FAM182B	Q5T319	152 aa		32.23	■■■□□ 2.75
SH2B1-209	ENST00000563674	FAM196A	Q6ZSG2	479 aa		32.23	■■■□□ 2.75
SH2B1-209	ENST00000563674	CRB1	P82279	1406 aa		32.22	■■■□□ 2.75
SH2B1-209	ENST00000563674	NINL	Q9Y2I6	1382 aa		32.21	■■■□□ 2.75
SH2B1-209	ENST00000563674	TOM1L2	Q6ZVM7	507 aa		32.21	■■■□□ 2.75
SH2B1-209	ENST00000563674	USP31	Q70CQ4	1352 aa		32.19	■■■□□ 2.74
SH2B1-209	ENST00000563674	EDC4	Q6P2E9	1401 aa	Known RBP	32.18	■■■□□ 2.74
SH2B1-209	ENST00000563674	TMF1	P82094	1093 aa		32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms