RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 RALGAPBQ86X10 1494 aa21.81■■□□□ 1.08
LPCAT4-204ENST00000563240 POLR3AO14802 1390 aaPredicted RBP21.79■■□□□ 1.08
LPCAT4-204ENST00000563240 ATAD2Q6PL18 1390 aa21.79■■□□□ 1.08
LPCAT4-204ENST00000563240 VPS72Q15906 364 aa21.79■■□□□ 1.08
LPCAT4-204ENST00000563240 PPIP5K1Q6PFW1 1433 aa21.79■■□□□ 1.08
LPCAT4-204ENST00000563240 ITSN1Q15811 1721 aa21.78■■□□□ 1.08
LPCAT4-204ENST00000563240 ABTB2Q8N961 1025 aa21.78■■□□□ 1.08
LPCAT4-204ENST00000563240 CABP1Q9NZU7 370 aa21.78■■□□□ 1.08
LPCAT4-204ENST00000563240 ALS2Q96Q42 1657 aa21.78■■□□□ 1.08
LPCAT4-204ENST00000563240 ABCA3Q99758 1704 aa21.77■■□□□ 1.08
LPCAT4-204ENST00000563240 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.08
LPCAT4-204ENST00000563240 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
LPCAT4-204ENST00000563240 PRDM11Q9NQV5 511 aa21.77■■□□□ 1.08
LPCAT4-204ENST00000563240 ZC3H6P61129 1189 aaKnown RBP21.76■■□□□ 1.07
LPCAT4-204ENST00000563240 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
LPCAT4-204ENST00000563240 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 GLI3P10071 1580 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 A0A0G2JS52 829 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 MYT1Q01538 1121 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 CHRNA2Q15822 529 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 SEPT12Q8IYM1 358 aa21.75■■□□□ 1.07
LPCAT4-204ENST00000563240 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
LPCAT4-204ENST00000563240 PLCH1Q4KWH8 1693 aa21.74■■□□□ 1.07
LPCAT4-204ENST00000563240 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.74■■□□□ 1.07
LPCAT4-204ENST00000563240 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
LPCAT4-204ENST00000563240 KIAA0232Q92628 1395 aa21.73■■□□□ 1.07
LPCAT4-204ENST00000563240 FAM98CQ17RN3 349 aaKnown RBP21.7■■□□□ 1.06
LPCAT4-204ENST00000563240 STRN4Q9NRL3 753 aa21.7■■□□□ 1.06
LPCAT4-204ENST00000563240 NLRP13Q86W25 1043 aa21.69■■□□□ 1.06
LPCAT4-204ENST00000563240 NWD2Q9ULI1 1742 aa21.69■■□□□ 1.06
LPCAT4-204ENST00000563240 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
LPCAT4-204ENST00000563240 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
LPCAT4-204ENST00000563240 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
LPCAT4-204ENST00000563240 NLRP6P59044 892 aa21.66■■□□□ 1.06
LPCAT4-204ENST00000563240 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
LPCAT4-204ENST00000563240 SPATA31A5Q5VU36 1347 aa21.65■■□□□ 1.06
LPCAT4-204ENST00000563240 SPATA31A7Q8IWB4 1347 aa21.65■■□□□ 1.06
LPCAT4-204ENST00000563240 EVA1CP58658 441 aa21.65■■□□□ 1.06
LPCAT4-204ENST00000563240 KRT27Q7Z3Y8 459 aa21.65■■□□□ 1.06
LPCAT4-204ENST00000563240 USP6P35125 1406 aa21.64■■□□□ 1.06
LPCAT4-204ENST00000563240 GCP02774 474 aa21.64■■□□□ 1.05
LPCAT4-204ENST00000563240 USP35Q9P2H5 1018 aa21.64■■□□□ 1.05
LPCAT4-204ENST00000563240 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
LPCAT4-204ENST00000563240 USP19O94966 1318 aa21.63■■□□□ 1.05
LPCAT4-204ENST00000563240 CCDC125Q86Z20 511 aa21.63■■□□□ 1.05
LPCAT4-204ENST00000563240 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
LPCAT4-204ENST00000563240 FAM182BQ5T319 152 aa21.61■■□□□ 1.05
LPCAT4-204ENST00000563240 ZNF692Q9BU19 519 aaPredicted RBP21.61■■□□□ 1.05
LPCAT4-204ENST00000563240 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
LPCAT4-204ENST00000563240 BRWD3Q6RI45 1802 aa21.6■■□□□ 1.05
LPCAT4-204ENST00000563240 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
LPCAT4-204ENST00000563240 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
LPCAT4-204ENST00000563240 SPATA31A1Q5TZJ5 1347 aa21.59■■□□□ 1.05
LPCAT4-204ENST00000563240 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
LPCAT4-204ENST00000563240 SOX12O15370 315 aa21.59■■□□□ 1.05
LPCAT4-204ENST00000563240 LARP1Q6PKG0 1096 aaKnown RBP21.59■■□□□ 1.05
LPCAT4-204ENST00000563240 SF3B2Q13435 895 aaKnown RBP21.58■■□□□ 1.05
LPCAT4-204ENST00000563240 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
LPCAT4-204ENST00000563240 SSH2Q76I76 1423 aa21.57■■□□□ 1.04
LPCAT4-204ENST00000563240 DEFB132Q7Z7B7 95 aa21.57■■□□□ 1.04
LPCAT4-204ENST00000563240 CPDO75976 1380 aa21.57■■□□□ 1.04
LPCAT4-204ENST00000563240 BLMP54132 1417 aaPredicted RBP21.56■■□□□ 1.04
LPCAT4-204ENST00000563240 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
LPCAT4-204ENST00000563240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
LPCAT4-204ENST00000563240 SLC12A5Q9H2X9 1139 aa21.55■■□□□ 1.04
LPCAT4-204ENST00000563240 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
LPCAT4-204ENST00000563240 CAMTA1Q9Y6Y1 1673 aa21.55■■□□□ 1.04
LPCAT4-204ENST00000563240 ST20-MTHFSA0A0A6YYL1 179 aa21.54■■□□□ 1.04
LPCAT4-204ENST00000563240 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
LPCAT4-204ENST00000563240 CPSF1Q10570 1443 aaKnown RBP21.53■■□□□ 1.04
LPCAT4-204ENST00000563240 TTC21AQ8NDW8 1320 aa21.52■■□□□ 1.03
LPCAT4-204ENST00000563240 EP400Q96L91 3159 aa21.51■■□□□ 1.03
LPCAT4-204ENST00000563240 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
LPCAT4-204ENST00000563240 HDGFL2Q7Z4V5 671 aaPredicted RBP21.5■■□□□ 1.03
LPCAT4-204ENST00000563240 PIK3C2AO00443 1686 aa21.5■■□□□ 1.03
LPCAT4-204ENST00000563240 BARGINQ6ZT62 677 aa21.49■■□□□ 1.03
LPCAT4-204ENST00000563240 NME9Q86XW9 330 aa21.49■■□□□ 1.03
LPCAT4-204ENST00000563240 KCNH5Q8NCM2 988 aa21.49■■□□□ 1.03
LPCAT4-204ENST00000563240 TESK2Q96S53 571 aa21.49■■□□□ 1.03
LPCAT4-204ENST00000563240 SLIT3O75094 1523 aa21.49■■□□□ 1.03
LPCAT4-204ENST00000563240 AXIN2Q9Y2T1 843 aa21.48■■□□□ 1.03
LPCAT4-204ENST00000563240 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
LPCAT4-204ENST00000563240 COL5A2P05997 1499 aaPredicted RBP21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 PDE3BQ13370 1112 aa21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 TOM1L2Q6ZVM7 507 aa21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 ARHGEF25Q86VW2 580 aa21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 THSD7AQ9UPZ6 1657 aa21.47■■□□□ 1.03
LPCAT4-204ENST00000563240 AKAP12Q02952 1782 aa21.46■■□□□ 1.03
LPCAT4-204ENST00000563240 TERF2IPQ9NYB0 399 aa21.46■■□□□ 1.03
LPCAT4-204ENST00000563240 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.03
LPCAT4-204ENST00000563240 BAG6P46379 1132 aa21.45■■□□□ 1.02
LPCAT4-204ENST00000563240 TRIM37O94972 964 aa21.44■■□□□ 1.02
LPCAT4-204ENST00000563240 CSB-PGBD3P0DP91 1061 aa21.44■■□□□ 1.02
LPCAT4-204ENST00000563240 EN1Q05925 392 aaPredicted RBP21.43■■□□□ 1.02
LPCAT4-204ENST00000563240 FAM196AQ6ZSG2 479 aa21.43■■□□□ 1.02
LPCAT4-204ENST00000563240 PUS7Q96PZ0 661 aaKnown RBP21.43■■□□□ 1.02
LPCAT4-204ENST00000563240 THRAP3Q9Y2W1 955 aaKnown RBP21.43■■□□□ 1.02
LPCAT4-204ENST00000563240 CRB1P82279 1406 aa21.43■■□□□ 1.02
LPCAT4-204ENST00000563240 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms