RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ATP7BP35670 1465 aa19.6■□□□□ 0.73
SPG7-207ENST00000563218 ACIN1Q9UKV3 1341 aaKnown RBP19.58■□□□□ 0.73
SPG7-207ENST00000563218 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.72
SPG7-207ENST00000563218 LRP5O75197 1615 aa19.57■□□□□ 0.72
SPG7-207ENST00000563218 KIAA1210Q9ULL0 1709 aa19.56■□□□□ 0.72
SPG7-207ENST00000563218 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
SPG7-207ENST00000563218 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
SPG7-207ENST00000563218 WASLO00401 505 aaPredicted RBP19.55■□□□□ 0.72
SPG7-207ENST00000563218 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
SPG7-207ENST00000563218 KRT27Q7Z3Y8 459 aa19.55■□□□□ 0.72
SPG7-207ENST00000563218 GPRASP1Q5JY77 1395 aa19.55■□□□□ 0.72
SPG7-207ENST00000563218 EIF3AQ14152 1382 aaKnown RBP19.54■□□□□ 0.72
SPG7-207ENST00000563218 A0A0G2JS52 829 aa19.53■□□□□ 0.72
SPG7-207ENST00000563218 MYT1Q01538 1121 aa19.53■□□□□ 0.72
SPG7-207ENST00000563218 NRKQ7Z2Y5 1582 aa19.53■□□□□ 0.72
SPG7-207ENST00000563218 FAM182BQ5T319 152 aa19.52■□□□□ 0.72
SPG7-207ENST00000563218 PAK3O75914 559 aaPredicted RBP19.5■□□□□ 0.71
SPG7-207ENST00000563218 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
SPG7-207ENST00000563218 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
SPG7-207ENST00000563218 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
SPG7-207ENST00000563218 LMO7Q8WWI1 1683 aa19.49■□□□□ 0.71
SPG7-207ENST00000563218 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
SPG7-207ENST00000563218 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
SPG7-207ENST00000563218 KIAA0232Q92628 1395 aa19.47■□□□□ 0.71
SPG7-207ENST00000563218 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
SPG7-207ENST00000563218 RREB1Q92766 1687 aa19.46■□□□□ 0.71
SPG7-207ENST00000563218 PSDA5PKW4 1024 aaPredicted RBP19.46■□□□□ 0.71
SPG7-207ENST00000563218 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
SPG7-207ENST00000563218 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
SPG7-207ENST00000563218 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
SPG7-207ENST00000563218 NUP188Q5SRE5 1749 aa19.44■□□□□ 0.7
SPG7-207ENST00000563218 EN1Q05925 392 aaPredicted RBP19.43■□□□□ 0.7
SPG7-207ENST00000563218 CDK19Q9BWU1 502 aa19.43■□□□□ 0.7
SPG7-207ENST00000563218 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
SPG7-207ENST00000563218 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
SPG7-207ENST00000563218 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
SPG7-207ENST00000563218 BAG6P46379 1132 aa19.42■□□□□ 0.7
SPG7-207ENST00000563218 ACEP12821 1306 aa19.42■□□□□ 0.7
SPG7-207ENST00000563218 ZC3H6P61129 1189 aaKnown RBP19.41■□□□□ 0.7
SPG7-207ENST00000563218 PARP4Q9UKK3 1724 aaKnown RBP19.41■□□□□ 0.7
SPG7-207ENST00000563218 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
SPG7-207ENST00000563218 RGPD5Q99666 1765 aa19.4■□□□□ 0.7
SPG7-207ENST00000563218 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
SPG7-207ENST00000563218 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
SPG7-207ENST00000563218 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
SPG7-207ENST00000563218 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
SPG7-207ENST00000563218 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
SPG7-207ENST00000563218 SSH2Q76I76 1423 aa19.39■□□□□ 0.69
SPG7-207ENST00000563218 PIK3C2AO00443 1686 aa19.38■□□□□ 0.69
SPG7-207ENST00000563218 HRCP23327 699 aa19.38■□□□□ 0.69
SPG7-207ENST00000563218 TRPM1Q7Z4N2 1603 aa19.37■□□□□ 0.69
SPG7-207ENST00000563218 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
SPG7-207ENST00000563218 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
SPG7-207ENST00000563218 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
SPG7-207ENST00000563218 EZH2Q15910 746 aaKnown RBP19.36■□□□□ 0.69
SPG7-207ENST00000563218 COL18A1P39060 1754 aa19.36■□□□□ 0.69
SPG7-207ENST00000563218 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
SPG7-207ENST00000563218 LRRC37A3O60309 1634 aa19.35■□□□□ 0.69
SPG7-207ENST00000563218 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
SPG7-207ENST00000563218 USP19O94966 1318 aa19.34■□□□□ 0.69
SPG7-207ENST00000563218 R3HDM1Q15032 1099 aaKnown RBP19.34■□□□□ 0.69
SPG7-207ENST00000563218 CCDC61Q9Y6R9 512 aa19.34■□□□□ 0.69
SPG7-207ENST00000563218 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
SPG7-207ENST00000563218 TRIM37O94972 964 aa19.33■□□□□ 0.68
SPG7-207ENST00000563218 LARP1Q6PKG0 1096 aaKnown RBP19.32■□□□□ 0.68
SPG7-207ENST00000563218 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
SPG7-207ENST00000563218 SLIT3O75094 1523 aa19.31■□□□□ 0.68
SPG7-207ENST00000563218 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
SPG7-207ENST00000563218 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
SPG7-207ENST00000563218 CPDO75976 1380 aa19.31■□□□□ 0.68
SPG7-207ENST00000563218 CAMKK2Q96RR4 588 aa19.3■□□□□ 0.68
SPG7-207ENST00000563218 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
SPG7-207ENST00000563218 SRPK2P78362 688 aaKnown RBP19.29■□□□□ 0.68
SPG7-207ENST00000563218 EVA1CP58658 441 aa19.28■□□□□ 0.68
SPG7-207ENST00000563218 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
SPG7-207ENST00000563218 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
SPG7-207ENST00000563218 USP6P35125 1406 aa19.27■□□□□ 0.68
SPG7-207ENST00000563218 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.68
SPG7-207ENST00000563218 BARGINQ6ZT62 677 aa19.27■□□□□ 0.68
SPG7-207ENST00000563218 GCP02774 474 aa19.26■□□□□ 0.67
SPG7-207ENST00000563218 MON2Q7Z3U7 1717 aa19.25■□□□□ 0.67
SPG7-207ENST00000563218 ZBTB7CA1YPR0 619 aa19.25■□□□□ 0.67
SPG7-207ENST00000563218 APBA3O96018 575 aa19.25■□□□□ 0.67
SPG7-207ENST00000563218 TCP11L2Q8N4U5 519 aa19.24■□□□□ 0.67
SPG7-207ENST00000563218 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
SPG7-207ENST00000563218 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
SPG7-207ENST00000563218 CRB1P82279 1406 aa19.23■□□□□ 0.67
SPG7-207ENST00000563218 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
SPG7-207ENST00000563218 LTN1O94822 1766 aa19.21■□□□□ 0.67
SPG7-207ENST00000563218 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
SPG7-207ENST00000563218 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
SPG7-207ENST00000563218 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
SPG7-207ENST00000563218 NLRP6P59044 892 aa19.19■□□□□ 0.66
SPG7-207ENST00000563218 NFAT5O94916 1531 aa19.19■□□□□ 0.66
SPG7-207ENST00000563218 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
SPG7-207ENST00000563218 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
SPG7-207ENST00000563218 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
SPG7-207ENST00000563218 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
SPG7-207ENST00000563218 THRAP3Q9Y2W1 955 aaKnown RBP19.18■□□□□ 0.66
SPG7-207ENST00000563218 AATKQ6ZMQ8 1374 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms