RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 NUDT12Q9BQG2 462 aa3.73□□□□□ -1.81
TNRC6A-210ENST00000563201 SSTR3P32745 418 aaPredicted RBP3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 MDM2Q00987 491 aaPredicted RBP3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 FOXK2Q01167 660 aa3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 NEUROD2Q15784 382 aa3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 GOPCQ9HD26 462 aa3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 FAM217BQ9NTX9 383 aaPredicted RBP3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 DNMT3AQ9Y6K1 912 aaPredicted RBP3.72□□□□□ -1.81
TNRC6A-210ENST00000563201 HOXA2O43364 376 aa3.71□□□□□ -1.82
TNRC6A-210ENST00000563201 ADH1CP00326 375 aa3.71□□□□□ -1.82
TNRC6A-210ENST00000563201 GIGYF2Q6Y7W6 1299 aaKnown RBP3.71□□□□□ -1.82
TNRC6A-210ENST00000563201 PURBQ96QR8 312 aaKnown RBP3.71□□□□□ -1.82
TNRC6A-210ENST00000563201 ADAMTS8Q9UP79 889 aa3.71□□□□□ -1.82
TNRC6A-210ENST00000563201 SPDYE5A6NIY4 337 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 MAN1A2O60476 641 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 PPFIA3O75145 1194 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 VARSP26640 1264 aaKnown RBP3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 SH3BP2P78314 561 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 NNTQ13423 1086 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 PTCRAQ6ISU1 281 aaPredicted RBP3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 GPAT2Q6NUI2 795 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 KANK3Q6NY19 840 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 RETREG3Q86VR2 466 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 PARP9Q8IXQ6 854 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 HLA-CQ95604 372 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 KDM4CQ9H3R0 1056 aa3.7□□□□□ -1.82
TNRC6A-210ENST00000563201 CCNYL3P0C7X3 344 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 TIMP2P16035 220 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 WDR4P57081 412 aaKnown RBP3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 TMEM132AQ24JP5 1023 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 TUSC1Q2TAM9 212 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 XP32Q5T750 250 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 SYMPKQ92797 1274 aaKnown RBP3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 BEGAINQ9BUH8 593 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 TLL2Q9Y6L7 1015 aa3.69□□□□□ -1.82
TNRC6A-210ENST00000563201 SOBPA7XYQ1 873 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 UPP2O95045 317 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 MS4A1P11836 297 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 PRKCSHP14314 528 aaPredicted RBP3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 BRPF1P55201 1214 aaPredicted RBP3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 GUCA2AQ02747 115 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 ERICH6Q7L0X2 663 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 UNC93B1Q9H1C4 597 aa3.68□□□□□ -1.82
TNRC6A-210ENST00000563201 C6orf229H3BNL8 230 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 APBB1O00213 710 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 SKIV2LQ15477 1246 aaKnown RBP3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 PTPRNQ16849 979 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 LINC01559Q495D7 138 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 SH3D19Q5HYK7 790 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 PRPF38BQ5VTL8 546 aaKnown RBP3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 FAM174AQ8TBP5 190 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 BAP1Q92560 729 aa3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 PCMTD1Q96MG8 357 aaPredicted RBP3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 KLF16Q9BXK1 252 aaPredicted RBP3.67□□□□□ -1.82
TNRC6A-210ENST00000563201 FDX1P10109 184 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 IRS1P35568 1242 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 KCNH2Q12809 1159 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 SVOPQ8N4V2 548 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 ZNF511Q8NB15 262 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 SCARF2Q96GP6 870 aaPredicted RBP3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 CNTNAP3BQ96NU0 1288 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 CNTNAP3Q9BZ76 1288 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 EVA1BQ9NVM1 165 aa3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 ATP1B4Q9UN42 357 aaPredicted RBP3.66□□□□□ -1.82
TNRC6A-210ENST00000563201 SPTLC1O15269 473 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 ZIC2O95409 532 aaPredicted RBP3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 SLURP2P0DP57 97 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 BMP2P12643 396 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 MARSP56192 900 aaKnown RBP3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 KRT76Q01546 638 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 NR5A1Q13285 461 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 C6orf118Q5T5N4 469 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 ZNF385CQ66K41 422 aaPredicted RBP3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 SPIRE2Q8WWL2 714 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 NANOS1Q8WY41 292 aaKnown RBP3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 CDK15Q96Q40 435 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 TBC1D2Q9BYX2 928 aa3.65□□□□□ -1.83
TNRC6A-210ENST00000563201 CLK2P49760 499 aaKnown RBP3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 ARID5BQ14865 1188 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 TMEM259Q4ZIN3 620 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 RIC3Q7Z5B4 369 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 LINC00528Q8N1L1 170 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 PNMA1Q8ND90 353 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 COL25A1Q9BXS0 654 aaPredicted RBP3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 ZBTB3Q9H5J0 574 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 PRM3Q9NNZ6 103 aa3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 SOS2Q07890 1332 aaPredicted RBP3.64□□□□□ -1.83
TNRC6A-210ENST00000563201 MSTNO14793 375 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 ADAM23O75077 832 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 MTMR2Q13614 643 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 DESI1Q6ICB0 168 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 RSBN1LQ6PCB5 846 aaPredicted RBP3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 MEIOBQ8N635 442 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 GPR161Q8N6U8 529 aaKnown RBP3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 IL27Q8NEV9 243 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 HELBQ8NG08 1087 aaPredicted RBP3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 PRR7Q8TB68 274 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 ITPKCQ96DU7 683 aa3.63□□□□□ -1.83
TNRC6A-210ENST00000563201 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms