RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 ARHGEF10O15013 1369 aa21.23■□□□□ 0.99
EDC3-206ENST00000563009 NRKQ7Z2Y5 1582 aa21.22■□□□□ 0.99
EDC3-206ENST00000563009 TERF2IPQ9NYB0 399 aa21.21■□□□□ 0.99
EDC3-206ENST00000563009 A0A1W2PP64 1363 aa21.21■□□□□ 0.99
EDC3-206ENST00000563009 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
EDC3-206ENST00000563009 ANKRD36BQ8N2N9 1353 aa21.2■□□□□ 0.98
EDC3-206ENST00000563009 PAK3O75914 559 aaPredicted RBP21.19■□□□□ 0.98
EDC3-206ENST00000563009 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
EDC3-206ENST00000563009 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
EDC3-206ENST00000563009 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
EDC3-206ENST00000563009 LRP6O75581 1613 aa21.17■□□□□ 0.98
EDC3-206ENST00000563009 EDC4Q6P2E9 1401 aaKnown RBP21.16■□□□□ 0.98
EDC3-206ENST00000563009 TTC21BQ7Z4L5 1316 aa21.16■□□□□ 0.98
EDC3-206ENST00000563009 CRYBG1Q9Y4K1 1723 aa21.15■□□□□ 0.98
EDC3-206ENST00000563009 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
EDC3-206ENST00000563009 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
EDC3-206ENST00000563009 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
EDC3-206ENST00000563009 PIK3C2AO00443 1686 aa21.15■□□□□ 0.98
EDC3-206ENST00000563009 ABTB2Q8N961 1025 aa21.13■□□□□ 0.97
EDC3-206ENST00000563009 POLR3GLQ9BT43 218 aa21.13■□□□□ 0.97
EDC3-206ENST00000563009 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
EDC3-206ENST00000563009 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
EDC3-206ENST00000563009 NUTM2BA6NNL0 878 aaPredicted RBP21.11■□□□□ 0.97
EDC3-206ENST00000563009 NUTM2EB1AL46 878 aaPredicted RBP21.11■□□□□ 0.97
EDC3-206ENST00000563009 NUTM2AQ8IVF1 878 aaPredicted RBP21.11■□□□□ 0.97
EDC3-206ENST00000563009 USP54Q70EL1 1684 aa21.1■□□□□ 0.97
EDC3-206ENST00000563009 CABLES1Q8TDN4 633 aa21.1■□□□□ 0.97
EDC3-206ENST00000563009 MARF1Q9Y4F3 1742 aaKnown RBP21.09■□□□□ 0.97
EDC3-206ENST00000563009 USP19O94966 1318 aa21.09■□□□□ 0.97
EDC3-206ENST00000563009 PHRF1Q9P1Y6 1649 aaKnown RBP21.09■□□□□ 0.97
EDC3-206ENST00000563009 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
EDC3-206ENST00000563009 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
EDC3-206ENST00000563009 NUTM2GQ5VZR2 741 aa21.08■□□□□ 0.97
EDC3-206ENST00000563009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.97
EDC3-206ENST00000563009 USP31Q70CQ4 1352 aa21.08■□□□□ 0.96
EDC3-206ENST00000563009 NLRP6P59044 892 aa21.07■□□□□ 0.96
EDC3-206ENST00000563009 SLIT3O75094 1523 aa21.07■□□□□ 0.96
EDC3-206ENST00000563009 NSD3Q9BZ95 1437 aa21.05■□□□□ 0.96
EDC3-206ENST00000563009 ADAMTS2O95450 1211 aa21.05■□□□□ 0.96
EDC3-206ENST00000563009 NME9Q86XW9 330 aa21.05■□□□□ 0.96
EDC3-206ENST00000563009 PANK3Q9H999 370 aa21.05■□□□□ 0.96
EDC3-206ENST00000563009 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
EDC3-206ENST00000563009 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
EDC3-206ENST00000563009 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
EDC3-206ENST00000563009 PLEKHG5O94827 1062 aa21.03■□□□□ 0.96
EDC3-206ENST00000563009 HAP1P54257 671 aaPredicted RBP21.03■□□□□ 0.96
EDC3-206ENST00000563009 ILDR2Q71H61 639 aa21.03■□□□□ 0.96
EDC3-206ENST00000563009 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
EDC3-206ENST00000563009 ZRANB1Q9UGI0 708 aa21.02■□□□□ 0.96
EDC3-206ENST00000563009 FYB1O15117 783 aa21.01■□□□□ 0.95
EDC3-206ENST00000563009 GCP02774 474 aa21.01■□□□□ 0.95
EDC3-206ENST00000563009 C8orf37Q96NL8 207 aa21■□□□□ 0.95
EDC3-206ENST00000563009 CPDO75976 1380 aa20.99■□□□□ 0.95
EDC3-206ENST00000563009 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
EDC3-206ENST00000563009 NFAT5O94916 1531 aa20.99■□□□□ 0.95
EDC3-206ENST00000563009 FNBP4Q8N3X1 1017 aaPredicted RBP20.98■□□□□ 0.95
EDC3-206ENST00000563009 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
EDC3-206ENST00000563009 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
EDC3-206ENST00000563009 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
EDC3-206ENST00000563009 NGLY1Q96IV0 654 aa20.97■□□□□ 0.95
EDC3-206ENST00000563009 SLIT2O94813 1529 aa20.97■□□□□ 0.95
EDC3-206ENST00000563009 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
EDC3-206ENST00000563009 COG3Q96JB2 828 aa20.96■□□□□ 0.95
EDC3-206ENST00000563009 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
EDC3-206ENST00000563009 GGNBP2Q9H3C7 697 aa20.96■□□□□ 0.95
EDC3-206ENST00000563009 RGS17Q9UGC6 210 aaPredicted RBP20.96■□□□□ 0.95
EDC3-206ENST00000563009 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
EDC3-206ENST00000563009 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
EDC3-206ENST00000563009 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
EDC3-206ENST00000563009 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
EDC3-206ENST00000563009 AFF2P51816 1311 aa20.95■□□□□ 0.94
EDC3-206ENST00000563009 PRDM11Q9NQV5 511 aa20.94■□□□□ 0.94
EDC3-206ENST00000563009 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
EDC3-206ENST00000563009 KNSTRNQ9Y448 316 aa20.93■□□□□ 0.94
EDC3-206ENST00000563009 NSD2O96028 1365 aa20.93■□□□□ 0.94
EDC3-206ENST00000563009 BCL9LQ86UU0 1499 aa20.93■□□□□ 0.94
EDC3-206ENST00000563009 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
EDC3-206ENST00000563009 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.92■□□□□ 0.94
EDC3-206ENST00000563009 ZNF772Q68DY9 489 aaPredicted RBP20.92■□□□□ 0.94
EDC3-206ENST00000563009 ARHGEF25Q86VW2 580 aa20.92■□□□□ 0.94
EDC3-206ENST00000563009 COL18A1P39060 1754 aa20.91■□□□□ 0.94
EDC3-206ENST00000563009 AMER1Q5JTC6 1135 aaPredicted RBP20.91■□□□□ 0.94
EDC3-206ENST00000563009 USP21Q9UK80 565 aa20.91■□□□□ 0.94
EDC3-206ENST00000563009 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
EDC3-206ENST00000563009 ABCC6O95255 1503 aa20.9■□□□□ 0.94
EDC3-206ENST00000563009 AATKQ6ZMQ8 1374 aa20.9■□□□□ 0.94
EDC3-206ENST00000563009 SOX12O15370 315 aa20.9■□□□□ 0.94
EDC3-206ENST00000563009 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
EDC3-206ENST00000563009 LTN1O94822 1766 aa20.89■□□□□ 0.93
EDC3-206ENST00000563009 UNC5CLQ8IV45 518 aa20.88■□□□□ 0.93
EDC3-206ENST00000563009 BTG4Q9NY30 223 aa20.88■□□□□ 0.93
EDC3-206ENST00000563009 CAMTA1Q9Y6Y1 1673 aa20.88■□□□□ 0.93
EDC3-206ENST00000563009 NPC1L1Q9UHC9 1359 aa20.87■□□□□ 0.93
EDC3-206ENST00000563009 SOCS7O14512 581 aa20.86■□□□□ 0.93
EDC3-206ENST00000563009 ATRNO75882 1429 aa20.86■□□□□ 0.93
EDC3-206ENST00000563009 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
EDC3-206ENST00000563009 POTEAQ6S8J7 498 aa20.85■□□□□ 0.93
EDC3-206ENST00000563009 FBLN1P23142 703 aa20.84■□□□□ 0.93
EDC3-206ENST00000563009 TRPC5Q9UL62 973 aaPredicted RBP20.84■□□□□ 0.93
EDC3-206ENST00000563009 MAP3K19Q56UN5 1328 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms