RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
CMTM3-204ENST00000562357 TOPAZ1Q8N9V7 1692 aa25.36■■□□□ 1.65
CMTM3-204ENST00000562357 SLIT2O94813 1529 aa25.35■■□□□ 1.65
CMTM3-204ENST00000562357 ALS2Q96Q42 1657 aa25.34■■□□□ 1.65
CMTM3-204ENST00000562357 ABCA3Q99758 1704 aa25.32■■□□□ 1.64
CMTM3-204ENST00000562357 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
CMTM3-204ENST00000562357 RALGAPBQ86X10 1494 aa25.31■■□□□ 1.64
CMTM3-204ENST00000562357 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.3■■□□□ 1.64
CMTM3-204ENST00000562357 CCDC9Q9Y3X0 531 aaKnown RBP25.29■■□□□ 1.64
CMTM3-204ENST00000562357 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
CMTM3-204ENST00000562357 ABTB2Q8N961 1025 aa25.27■■□□□ 1.64
CMTM3-204ENST00000562357 UPF1Q92900 1129 aaKnown RBP eCLIP25.27■■□□□ 1.64
CMTM3-204ENST00000562357 CABP1Q9NZU7 370 aa25.27■■□□□ 1.64
CMTM3-204ENST00000562357 BRD4O60885 1362 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-204ENST00000562357 PRDM11Q9NQV5 511 aa25.26■■□□□ 1.63
CMTM3-204ENST00000562357 NWD2Q9ULI1 1742 aa25.26■■□□□ 1.63
CMTM3-204ENST00000562357 VPS72Q15906 364 aa25.25■■□□□ 1.63
CMTM3-204ENST00000562357 NUTM2GQ5VZR2 741 aa25.25■■□□□ 1.63
CMTM3-204ENST00000562357 ATAD2Q6PL18 1390 aa25.25■■□□□ 1.63
CMTM3-204ENST00000562357 PLCH1Q4KWH8 1693 aa25.25■■□□□ 1.63
CMTM3-204ENST00000562357 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
CMTM3-204ENST00000562357 BTG4Q9NY30 223 aa25.23■■□□□ 1.63
CMTM3-204ENST00000562357 NLRP13Q86W25 1043 aa25.22■■□□□ 1.63
CMTM3-204ENST00000562357 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
CMTM3-204ENST00000562357 COL14A1Q05707 1796 aaKnown RBP25.22■■□□□ 1.63
CMTM3-204ENST00000562357 USP6P35125 1406 aa25.2■■□□□ 1.63
CMTM3-204ENST00000562357 KIAA0232Q92628 1395 aa25.19■■□□□ 1.62
CMTM3-204ENST00000562357 ZNF692Q9BU19 519 aaPredicted RBP25.19■■□□□ 1.62
CMTM3-204ENST00000562357 GLI3P10071 1580 aa25.18■■□□□ 1.62
CMTM3-204ENST00000562357 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
CMTM3-204ENST00000562357 CRYBG1Q9Y4K1 1723 aa25.18■■□□□ 1.62
CMTM3-204ENST00000562357 ZC3H6P61129 1189 aaKnown RBP25.18■■□□□ 1.62
CMTM3-204ENST00000562357 PHRF1Q9P1Y6 1649 aaKnown RBP25.17■■□□□ 1.62
CMTM3-204ENST00000562357 A0A0G2JS52 829 aa25.16■■□□□ 1.62
CMTM3-204ENST00000562357 MYT1Q01538 1121 aa25.16■■□□□ 1.62
CMTM3-204ENST00000562357 USP19O94966 1318 aa25.15■■□□□ 1.62
CMTM3-204ENST00000562357 SLC24A1O60721 1099 aa25.15■■□□□ 1.62
CMTM3-204ENST00000562357 NLRP6P59044 892 aa25.14■■□□□ 1.62
CMTM3-204ENST00000562357 CHRNA2Q15822 529 aa25.14■■□□□ 1.62
CMTM3-204ENST00000562357 SEPT12Q8IYM1 358 aa25.14■■□□□ 1.62
CMTM3-204ENST00000562357 TIMELESSQ9UNS1 1208 aa25.13■■□□□ 1.61
CMTM3-204ENST00000562357 NRAPQ86VF7 1730 aa25.12■■□□□ 1.61
CMTM3-204ENST00000562357 NRKQ7Z2Y5 1582 aa25.11■■□□□ 1.61
CMTM3-204ENST00000562357 GCP02774 474 aa25.11■■□□□ 1.61
CMTM3-204ENST00000562357 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
CMTM3-204ENST00000562357 CPDO75976 1380 aa25.1■■□□□ 1.61
CMTM3-204ENST00000562357 KTN1Q86UP2 1357 aaKnown RBP25.1■■□□□ 1.61
CMTM3-204ENST00000562357 EVA1CP58658 441 aa25.1■■□□□ 1.61
CMTM3-204ENST00000562357 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
CMTM3-204ENST00000562357 TTC21AQ8NDW8 1320 aa25.1■■□□□ 1.61
CMTM3-204ENST00000562357 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
CMTM3-204ENST00000562357 SSH2Q76I76 1423 aa25.09■■□□□ 1.61
CMTM3-204ENST00000562357 SPATA31A5Q5VU36 1347 aa25.09■■□□□ 1.61
CMTM3-204ENST00000562357 TTC21BQ7Z4L5 1316 aa25.09■■□□□ 1.61
CMTM3-204ENST00000562357 SPATA31A7Q8IWB4 1347 aa25.09■■□□□ 1.61
CMTM3-204ENST00000562357 ST20-MTHFSA0A0A6YYL1 179 aa25.08■■□□□ 1.61
CMTM3-204ENST00000562357 ONECUT3O60422 494 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-204ENST00000562357 HDGFL2Q7Z4V5 671 aaPredicted RBP25.08■■□□□ 1.61
CMTM3-204ENST00000562357 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
CMTM3-204ENST00000562357 CCDC125Q86Z20 511 aa25.07■■□□□ 1.6
CMTM3-204ENST00000562357 PUS7Q96PZ0 661 aaKnown RBP25.07■■□□□ 1.6
CMTM3-204ENST00000562357 ZBTB7CA1YPR0 619 aa25.06■■□□□ 1.6
CMTM3-204ENST00000562357 KRT27Q7Z3Y8 459 aa25.05■■□□□ 1.6
CMTM3-204ENST00000562357 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
CMTM3-204ENST00000562357 TERF2IPQ9NYB0 399 aa25.05■■□□□ 1.6
CMTM3-204ENST00000562357 AKAP12Q02952 1782 aa25.04■■□□□ 1.6
CMTM3-204ENST00000562357 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
CMTM3-204ENST00000562357 USP47Q96K76 1375 aa25.04■■□□□ 1.6
CMTM3-204ENST00000562357 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
CMTM3-204ENST00000562357 SLIT3O75094 1523 aa25.02■■□□□ 1.6
CMTM3-204ENST00000562357 TESK2Q96S53 571 aa25.02■■□□□ 1.6
CMTM3-204ENST00000562357 SPATA31A1Q5TZJ5 1347 aa25.02■■□□□ 1.6
CMTM3-204ENST00000562357 NINLQ9Y2I6 1382 aa25.02■■□□□ 1.6
CMTM3-204ENST00000562357 SLC12A5Q9H2X9 1139 aa25.01■■□□□ 1.59
CMTM3-204ENST00000562357 SF3B2Q13435 895 aaKnown RBP25■■□□□ 1.59
CMTM3-204ENST00000562357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
CMTM3-204ENST00000562357 USP35Q9P2H5 1018 aa25■■□□□ 1.59
CMTM3-204ENST00000562357 TMF1P82094 1093 aa24.99■■□□□ 1.59
CMTM3-204ENST00000562357 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
CMTM3-204ENST00000562357 CAMTA1Q9Y6Y1 1673 aa24.98■■□□□ 1.59
CMTM3-204ENST00000562357 BLMP54132 1417 aaPredicted RBP24.98■■□□□ 1.59
CMTM3-204ENST00000562357 AATKQ6ZMQ8 1374 aa24.98■■□□□ 1.59
CMTM3-204ENST00000562357 SOX12O15370 315 aa24.98■■□□□ 1.59
CMTM3-204ENST00000562357 LARP1Q6PKG0 1096 aaKnown RBP24.97■■□□□ 1.59
CMTM3-204ENST00000562357 BRWD3Q6RI45 1802 aa24.97■■□□□ 1.59
CMTM3-204ENST00000562357 LMO7Q8WWI1 1683 aa24.97■■□□□ 1.59
CMTM3-204ENST00000562357 EDC4Q6P2E9 1401 aaKnown RBP24.96■■□□□ 1.59
CMTM3-204ENST00000562357 CDCA8Q53HL2 280 aa24.96■■□□□ 1.59
CMTM3-204ENST00000562357 CD163L1Q9NR16 1453 aa24.96■■□□□ 1.59
CMTM3-204ENST00000562357 TCP11L2Q8N4U5 519 aa24.95■■□□□ 1.58
CMTM3-204ENST00000562357 COL5A2P05997 1499 aaPredicted RBP24.95■■□□□ 1.58
CMTM3-204ENST00000562357 A0A1W2PP64 1363 aa24.94■■□□□ 1.58
CMTM3-204ENST00000562357 BARGINQ6ZT62 677 aa24.94■■□□□ 1.58
CMTM3-204ENST00000562357 THRAP3Q9Y2W1 955 aaKnown RBP24.93■■□□□ 1.58
CMTM3-204ENST00000562357 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
CMTM3-204ENST00000562357 THSD7AQ9UPZ6 1657 aa24.92■■□□□ 1.58
CMTM3-204ENST00000562357 ARHGEF25Q86VW2 580 aa24.92■■□□□ 1.58
CMTM3-204ENST00000562357 NME9Q86XW9 330 aa24.92■■□□□ 1.58
CMTM3-204ENST00000562357 CRB1P82279 1406 aa24.91■■□□□ 1.58
CMTM3-204ENST00000562357 TOM1L2Q6ZVM7 507 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms