RNA–Protein interactions for RNA: ENST00000562015.5

CNN2-203, Transcript of calponin 2, humanhuman

TSL 4

Gene CNN2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-203ENST00000562015 ABCA3Q99758 1704 aa20.85■□□□□ 0.93
CNN2-203ENST00000562015 RALGAPBQ86X10 1494 aa20.84■□□□□ 0.93
CNN2-203ENST00000562015 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
CNN2-203ENST00000562015 BCL9LQ86UU0 1499 aa20.82■□□□□ 0.92
CNN2-203ENST00000562015 FAM83GA6ND36 823 aa20.82■□□□□ 0.92
CNN2-203ENST00000562015 ATRNO75882 1429 aa20.8■□□□□ 0.92
CNN2-203ENST00000562015 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
CNN2-203ENST00000562015 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
CNN2-203ENST00000562015 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
CNN2-203ENST00000562015 RGS12O14924 1447 aa20.78■□□□□ 0.92
CNN2-203ENST00000562015 CCDC9Q9Y3X0 531 aaKnown RBP20.78■□□□□ 0.92
CNN2-203ENST00000562015 SLIT2O94813 1529 aa20.78■□□□□ 0.92
CNN2-203ENST00000562015 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.92
CNN2-203ENST00000562015 GJD4Q96KN9 370 aaPredicted RBP20.77■□□□□ 0.92
CNN2-203ENST00000562015 ZC3H6P61129 1189 aaKnown RBP20.76■□□□□ 0.91
CNN2-203ENST00000562015 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
CNN2-203ENST00000562015 CDK12Q9NYV4 1490 aaPredicted RBP20.75■□□□□ 0.91
CNN2-203ENST00000562015 ST20-MTHFSA0A0A6YYL1 179 aa20.75■□□□□ 0.91
CNN2-203ENST00000562015 CHRNA2Q15822 529 aa20.75■□□□□ 0.91
CNN2-203ENST00000562015 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
CNN2-203ENST00000562015 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.74■□□□□ 0.91
CNN2-203ENST00000562015 PRDM11Q9NQV5 511 aa20.74■□□□□ 0.91
CNN2-203ENST00000562015 TMC1Q8TDI8 760 aa20.73■□□□□ 0.91
CNN2-203ENST00000562015 PHRF1Q9P1Y6 1649 aaKnown RBP20.72■□□□□ 0.91
CNN2-203ENST00000562015 NWD2Q9ULI1 1742 aa20.72■□□□□ 0.91
CNN2-203ENST00000562015 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
CNN2-203ENST00000562015 USP6P35125 1406 aa20.71■□□□□ 0.91
CNN2-203ENST00000562015 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.91
CNN2-203ENST00000562015 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
CNN2-203ENST00000562015 ATAD2Q6PL18 1390 aa20.71■□□□□ 0.91
CNN2-203ENST00000562015 COL14A1Q05707 1796 aaKnown RBP20.7■□□□□ 0.9
CNN2-203ENST00000562015 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
CNN2-203ENST00000562015 NLRP6P59044 892 aa20.7■□□□□ 0.9
CNN2-203ENST00000562015 VPS72Q15906 364 aa20.7■□□□□ 0.9
CNN2-203ENST00000562015 NLRP13Q86W25 1043 aa20.7■□□□□ 0.9
CNN2-203ENST00000562015 SBNO2Q9Y2G9 1366 aa20.7■□□□□ 0.9
CNN2-203ENST00000562015 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
CNN2-203ENST00000562015 GLI3P10071 1580 aa20.69■□□□□ 0.9
CNN2-203ENST00000562015 ZNF692Q9BU19 519 aaPredicted RBP20.68■□□□□ 0.9
CNN2-203ENST00000562015 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
CNN2-203ENST00000562015 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
CNN2-203ENST00000562015 GCP02774 474 aa20.67■□□□□ 0.9
CNN2-203ENST00000562015 TESK2Q96S53 571 aa20.67■□□□□ 0.9
CNN2-203ENST00000562015 TTC21BQ7Z4L5 1316 aa20.67■□□□□ 0.9
CNN2-203ENST00000562015 KTN1Q86UP2 1357 aaKnown RBP20.67■□□□□ 0.9
CNN2-203ENST00000562015 NRAPQ86VF7 1730 aa20.67■□□□□ 0.9
CNN2-203ENST00000562015 A0A0G2JS52 829 aa20.66■□□□□ 0.9
CNN2-203ENST00000562015 SOX12O15370 315 aa20.66■□□□□ 0.9
CNN2-203ENST00000562015 MYT1Q01538 1121 aa20.66■□□□□ 0.9
CNN2-203ENST00000562015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.9
CNN2-203ENST00000562015 TIMELESSQ9UNS1 1208 aa20.66■□□□□ 0.9
CNN2-203ENST00000562015 USP47Q96K76 1375 aa20.66■□□□□ 0.9
CNN2-203ENST00000562015 BRD4O60885 1362 aaPredicted RBP20.65■□□□□ 0.9
CNN2-203ENST00000562015 USP19O94966 1318 aa20.65■□□□□ 0.9
CNN2-203ENST00000562015 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
CNN2-203ENST00000562015 NRKQ7Z2Y5 1582 aa20.64■□□□□ 0.9
CNN2-203ENST00000562015 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
CNN2-203ENST00000562015 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.89
CNN2-203ENST00000562015 PIK3C2AO00443 1686 aa20.64■□□□□ 0.89
CNN2-203ENST00000562015 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
CNN2-203ENST00000562015 EVA1CP58658 441 aa20.63■□□□□ 0.89
CNN2-203ENST00000562015 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
CNN2-203ENST00000562015 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
CNN2-203ENST00000562015 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
CNN2-203ENST00000562015 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
CNN2-203ENST00000562015 MON2Q7Z3U7 1717 aa20.6■□□□□ 0.89
CNN2-203ENST00000562015 CD163L1Q9NR16 1453 aa20.6■□□□□ 0.89
CNN2-203ENST00000562015 SPATA31A5Q5VU36 1347 aa20.59■□□□□ 0.89
CNN2-203ENST00000562015 SPATA31A7Q8IWB4 1347 aa20.59■□□□□ 0.89
CNN2-203ENST00000562015 TTC21AQ8NDW8 1320 aa20.59■□□□□ 0.89
CNN2-203ENST00000562015 TMF1P82094 1093 aa20.59■□□□□ 0.89
CNN2-203ENST00000562015 NME9Q86XW9 330 aa20.59■□□□□ 0.89
CNN2-203ENST00000562015 TERF2IPQ9NYB0 399 aa20.58■□□□□ 0.89
CNN2-203ENST00000562015 CPDO75976 1380 aa20.58■□□□□ 0.88
CNN2-203ENST00000562015 CAMTA1Q9Y6Y1 1673 aa20.58■□□□□ 0.88
CNN2-203ENST00000562015 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
CNN2-203ENST00000562015 EP400Q96L91 3159 aa20.56■□□□□ 0.88
CNN2-203ENST00000562015 ONECUT3O60422 494 aaPredicted RBP20.56■□□□□ 0.88
CNN2-203ENST00000562015 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
CNN2-203ENST00000562015 LARP1Q6PKG0 1096 aaKnown RBP20.56■□□□□ 0.88
CNN2-203ENST00000562015 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
CNN2-203ENST00000562015 SLIT3O75094 1523 aa20.55■□□□□ 0.88
CNN2-203ENST00000562015 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
CNN2-203ENST00000562015 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
CNN2-203ENST00000562015 RGPD5Q99666 1765 aa20.54■□□□□ 0.88
CNN2-203ENST00000562015 LMO7Q8WWI1 1683 aa20.53■□□□□ 0.88
CNN2-203ENST00000562015 FAM182BQ5T319 152 aa20.52■□□□□ 0.88
CNN2-203ENST00000562015 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
CNN2-203ENST00000562015 AXIN2Q9Y2T1 843 aa20.52■□□□□ 0.88
CNN2-203ENST00000562015 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
CNN2-203ENST00000562015 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
CNN2-203ENST00000562015 ARHGEF25Q86VW2 580 aa20.5■□□□□ 0.87
CNN2-203ENST00000562015 COL18A1P39060 1754 aa20.49■□□□□ 0.87
CNN2-203ENST00000562015 AATKQ6ZMQ8 1374 aa20.49■□□□□ 0.87
CNN2-203ENST00000562015 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
CNN2-203ENST00000562015 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
CNN2-203ENST00000562015 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
CNN2-203ENST00000562015 USP31Q70CQ4 1352 aa20.47■□□□□ 0.87
CNN2-203ENST00000562015 HSPA5P11021 654 aaKnown RBP20.47■□□□□ 0.87
CNN2-203ENST00000562015 TCP11L2Q8N4U5 519 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms