RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
SEMA4B-220ENST00000561321 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
SEMA4B-220ENST00000561321 UPF1Q92900 1129 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEMA4B-220ENST00000561321 PPIP5K1Q6PFW1 1433 aa17.6■□□□□ 0.41
SEMA4B-220ENST00000561321 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
SEMA4B-220ENST00000561321 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
SEMA4B-220ENST00000561321 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
SEMA4B-220ENST00000561321 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
SEMA4B-220ENST00000561321 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
SEMA4B-220ENST00000561321 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
SEMA4B-220ENST00000561321 NWD2Q9ULI1 1742 aa17.57■□□□□ 0.4
SEMA4B-220ENST00000561321 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
SEMA4B-220ENST00000561321 CRYBG1Q9Y4K1 1723 aa17.56■□□□□ 0.4
SEMA4B-220ENST00000561321 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
SEMA4B-220ENST00000561321 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
SEMA4B-220ENST00000561321 GLI3P10071 1580 aa17.55■□□□□ 0.4
SEMA4B-220ENST00000561321 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
SEMA4B-220ENST00000561321 BTG4Q9NY30 223 aa17.54■□□□□ 0.4
SEMA4B-220ENST00000561321 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-220ENST00000561321 VPS72Q15906 364 aa17.53■□□□□ 0.4
SEMA4B-220ENST00000561321 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
SEMA4B-220ENST00000561321 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-220ENST00000561321 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
SEMA4B-220ENST00000561321 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
SEMA4B-220ENST00000561321 NRAPQ86VF7 1730 aa17.52■□□□□ 0.39
SEMA4B-220ENST00000561321 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
SEMA4B-220ENST00000561321 KIAA0232Q92628 1395 aa17.51■□□□□ 0.39
SEMA4B-220ENST00000561321 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
SEMA4B-220ENST00000561321 EP400Q96L91 3159 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 USP6P35125 1406 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 A0A0G2JS52 829 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 MYT1Q01538 1121 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 PCGF6Q9BYE7 350 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
SEMA4B-220ENST00000561321 NRKQ7Z2Y5 1582 aa17.47■□□□□ 0.39
SEMA4B-220ENST00000561321 NLRP13Q86W25 1043 aa17.46■□□□□ 0.39
SEMA4B-220ENST00000561321 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
SEMA4B-220ENST00000561321 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
SEMA4B-220ENST00000561321 STRN4Q9NRL3 753 aa17.45■□□□□ 0.38
SEMA4B-220ENST00000561321 USP19O94966 1318 aa17.45■□□□□ 0.38
SEMA4B-220ENST00000561321 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
SEMA4B-220ENST00000561321 AKAP12Q02952 1782 aa17.44■□□□□ 0.38
SEMA4B-220ENST00000561321 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
SEMA4B-220ENST00000561321 NLRP6P59044 892 aa17.44■□□□□ 0.38
SEMA4B-220ENST00000561321 GCP02774 474 aa17.43■□□□□ 0.38
SEMA4B-220ENST00000561321 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
SEMA4B-220ENST00000561321 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
SEMA4B-220ENST00000561321 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
SEMA4B-220ENST00000561321 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
SEMA4B-220ENST00000561321 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-220ENST00000561321 TMC1Q8TDI8 760 aa17.42■□□□□ 0.38
SEMA4B-220ENST00000561321 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-220ENST00000561321 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
SEMA4B-220ENST00000561321 EVA1CP58658 441 aa17.41■□□□□ 0.38
SEMA4B-220ENST00000561321 TTC21BQ7Z4L5 1316 aa17.41■□□□□ 0.38
SEMA4B-220ENST00000561321 ST20-MTHFSA0A0A6YYL1 179 aa17.4■□□□□ 0.38
SEMA4B-220ENST00000561321 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
SEMA4B-220ENST00000561321 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
SEMA4B-220ENST00000561321 CPDO75976 1380 aa17.4■□□□□ 0.38
SEMA4B-220ENST00000561321 CAMTA1Q9Y6Y1 1673 aa17.39■□□□□ 0.37
SEMA4B-220ENST00000561321 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
SEMA4B-220ENST00000561321 SOX12O15370 315 aa17.38■□□□□ 0.37
SEMA4B-220ENST00000561321 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
SEMA4B-220ENST00000561321 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
SEMA4B-220ENST00000561321 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
SEMA4B-220ENST00000561321 SLIT3O75094 1523 aa17.37■□□□□ 0.37
SEMA4B-220ENST00000561321 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SEMA4B-220ENST00000561321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEMA4B-220ENST00000561321 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
SEMA4B-220ENST00000561321 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
SEMA4B-220ENST00000561321 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
SEMA4B-220ENST00000561321 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
SEMA4B-220ENST00000561321 TESK2Q96S53 571 aa17.35■□□□□ 0.37
SEMA4B-220ENST00000561321 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
SEMA4B-220ENST00000561321 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
SEMA4B-220ENST00000561321 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
SEMA4B-220ENST00000561321 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
SEMA4B-220ENST00000561321 USP47Q96K76 1375 aa17.34■□□□□ 0.37
SEMA4B-220ENST00000561321 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.37
SEMA4B-220ENST00000561321 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
SEMA4B-220ENST00000561321 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SEMA4B-220ENST00000561321 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
SEMA4B-220ENST00000561321 NME9Q86XW9 330 aa17.32■□□□□ 0.36
SEMA4B-220ENST00000561321 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
SEMA4B-220ENST00000561321 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
SEMA4B-220ENST00000561321 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
SEMA4B-220ENST00000561321 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
SEMA4B-220ENST00000561321 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
SEMA4B-220ENST00000561321 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
SEMA4B-220ENST00000561321 DEFB132Q7Z7B7 95 aa17.3■□□□□ 0.36
SEMA4B-220ENST00000561321 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
SEMA4B-220ENST00000561321 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
SEMA4B-220ENST00000561321 COL18A1P39060 1754 aa17.3■□□□□ 0.36
SEMA4B-220ENST00000561321 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
SEMA4B-220ENST00000561321 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
SEMA4B-220ENST00000561321 TMF1P82094 1093 aa17.29■□□□□ 0.36
SEMA4B-220ENST00000561321 BARGINQ6ZT62 677 aa17.29■□□□□ 0.36
SEMA4B-220ENST00000561321 ARHGEF25Q86VW2 580 aa17.29■□□□□ 0.36
SEMA4B-220ENST00000561321 AXIN2Q9Y2T1 843 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms