RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
SPG11-224ENST00000561268 FNBP4Q8N3X1 1017 aaPredicted RBP10.05□□□□□ -0.8
SPG11-224ENST00000561268 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
SPG11-224ENST00000561268 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
SPG11-224ENST00000561268 PIK3C2AO00443 1686 aa10.05□□□□□ -0.8
SPG11-224ENST00000561268 ARHGEF10O15013 1369 aa10.04□□□□□ -0.8
SPG11-224ENST00000561268 GPRASP1Q5JY77 1395 aa10.04□□□□□ -0.8
SPG11-224ENST00000561268 POLR3AO14802 1390 aaPredicted RBP10.03□□□□□ -0.8
SPG11-224ENST00000561268 FOXO3O43524 673 aa10.03□□□□□ -0.8
SPG11-224ENST00000561268 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
SPG11-224ENST00000561268 RALGAPBQ86X10 1494 aa10.03□□□□□ -0.8
SPG11-224ENST00000561268 EP400Q96L91 3159 aa10.02□□□□□ -0.8
SPG11-224ENST00000561268 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
SPG11-224ENST00000561268 TNS1Q9HBL0 1735 aaKnown RBP10.02□□□□□ -0.81
SPG11-224ENST00000561268 COL18A1P39060 1754 aa10.01□□□□□ -0.81
SPG11-224ENST00000561268 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
SPG11-224ENST00000561268 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
SPG11-224ENST00000561268 WASLO00401 505 aaPredicted RBP10.01□□□□□ -0.81
SPG11-224ENST00000561268 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
SPG11-224ENST00000561268 TRAK1Q9UPV9 953 aa10.01□□□□□ -0.81
SPG11-224ENST00000561268 SLIT3O75094 1523 aa10.01□□□□□ -0.81
SPG11-224ENST00000561268 SBNO2Q9Y2G9 1366 aa10.01□□□□□ -0.81
SPG11-224ENST00000561268 RGPD1P0DJD0 1748 aa10□□□□□ -0.81
SPG11-224ENST00000561268 NUTM2FA1L443 756 aa10□□□□□ -0.81
SPG11-224ENST00000561268 C8orf37Q96NL8 207 aa10□□□□□ -0.81
SPG11-224ENST00000561268 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
SPG11-224ENST00000561268 RGPD5Q99666 1765 aa9.99□□□□□ -0.81
SPG11-224ENST00000561268 HAX1O00165 279 aa9.99□□□□□ -0.81
SPG11-224ENST00000561268 RXRBP28702 533 aa9.99□□□□□ -0.81
SPG11-224ENST00000561268 RBM6P78332 1123 aaKnown RBP9.99□□□□□ -0.81
SPG11-224ENST00000561268 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
SPG11-224ENST00000561268 POGKQ9P215 609 aa9.99□□□□□ -0.81
SPG11-224ENST00000561268 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
SPG11-224ENST00000561268 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
SPG11-224ENST00000561268 SAFB2Q14151 953 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPG11-224ENST00000561268 KRT28Q7Z3Y7 464 aa9.98□□□□□ -0.81
SPG11-224ENST00000561268 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
SPG11-224ENST00000561268 ABCC6O95255 1503 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 LTN1O94822 1766 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 ADAMTS2O95450 1211 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
SPG11-224ENST00000561268 SSH2Q76I76 1423 aa9.97□□□□□ -0.81
SPG11-224ENST00000561268 SBF2Q86WG5 1849 aa9.96□□□□□ -0.81
SPG11-224ENST00000561268 PSME1Q06323 249 aa9.96□□□□□ -0.82
SPG11-224ENST00000561268 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
SPG11-224ENST00000561268 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
SPG11-224ENST00000561268 NGLY1Q96IV0 654 aa9.96□□□□□ -0.82
SPG11-224ENST00000561268 HIRIP3Q9BW71 556 aaPredicted RBP9.96□□□□□ -0.82
SPG11-224ENST00000561268 QTRT2Q9H974 415 aaKnown RBP9.96□□□□□ -0.82
SPG11-224ENST00000561268 USP21Q9UK80 565 aa9.96□□□□□ -0.82
SPG11-224ENST00000561268 RGPD3A6NKT7 1758 aaPredicted RBP9.96□□□□□ -0.82
SPG11-224ENST00000561268 RGPD4Q7Z3J3 1758 aa9.96□□□□□ -0.82
SPG11-224ENST00000561268 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 USP19O94966 1318 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 CENPJQ9HC77 1338 aaPredicted RBP9.95□□□□□ -0.82
SPG11-224ENST00000561268 ATAD2Q6PL18 1390 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 USP6P35125 1406 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 PPIP5K1Q6PFW1 1433 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 MYOM1P52179 1685 aa9.95□□□□□ -0.82
SPG11-224ENST00000561268 PEAK1Q9H792 1746 aa9.94□□□□□ -0.82
SPG11-224ENST00000561268 RREB1Q92766 1687 aa9.94□□□□□ -0.82
SPG11-224ENST00000561268 LRRC37A3O60309 1634 aa9.94□□□□□ -0.82
SPG11-224ENST00000561268 PLEKHG3A1L390 1219 aa9.94□□□□□ -0.82
SPG11-224ENST00000561268 PMFBP1Q8TBY8 1022 aa9.94□□□□□ -0.82
SPG11-224ENST00000561268 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
SPG11-224ENST00000561268 NFAT5O94916 1531 aa9.93□□□□□ -0.82
SPG11-224ENST00000561268 ROCK2O75116 1388 aaKnown RBP9.93□□□□□ -0.82
SPG11-224ENST00000561268 CPDO75976 1380 aa9.93□□□□□ -0.82
SPG11-224ENST00000561268 UNC5CLQ8IV45 518 aa9.93□□□□□ -0.82
SPG11-224ENST00000561268 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
SPG11-224ENST00000561268 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
SPG11-224ENST00000561268 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
SPG11-224ENST00000561268 CPSF1Q10570 1443 aaKnown RBP9.92□□□□□ -0.82
SPG11-224ENST00000561268 SIN3AQ96ST3 1273 aa9.92□□□□□ -0.82
SPG11-224ENST00000561268 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
SPG11-224ENST00000561268 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
SPG11-224ENST00000561268 ACEP12821 1306 aa9.91□□□□□ -0.82
SPG11-224ENST00000561268 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
SPG11-224ENST00000561268 VPS72Q15906 364 aa9.91□□□□□ -0.82
SPG11-224ENST00000561268 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
SPG11-224ENST00000561268 CDK19Q9BWU1 502 aa9.91□□□□□ -0.82
SPG11-224ENST00000561268 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
SPG11-224ENST00000561268 NBPF8Q3BBV2 869 aa9.9□□□□□ -0.82
SPG11-224ENST00000561268 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
SPG11-224ENST00000561268 COL5A2P05997 1499 aaPredicted RBP9.9□□□□□ -0.83
SPG11-224ENST00000561268 ANKRD26Q9UPS8 1709 aa9.9□□□□□ -0.83
SPG11-224ENST00000561268 LRP5O75197 1615 aa9.89□□□□□ -0.83
SPG11-224ENST00000561268 NUP188Q5SRE5 1749 aa9.89□□□□□ -0.83
SPG11-224ENST00000561268 KIAA0232Q92628 1395 aa9.88□□□□□ -0.83
SPG11-224ENST00000561268 NGDNQ8NEJ9 315 aaKnown RBP9.88□□□□□ -0.83
SPG11-224ENST00000561268 DISP2A7MBM2 1401 aa9.88□□□□□ -0.83
SPG11-224ENST00000561268 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
SPG11-224ENST00000561268 FAM83GA6ND36 823 aa9.87□□□□□ -0.83
SPG11-224ENST00000561268 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
SPG11-224ENST00000561268 TONSLQ96HA7 1378 aa9.87□□□□□ -0.83
SPG11-224ENST00000561268 SPATA31A5Q5VU36 1347 aa9.86□□□□□ -0.83
SPG11-224ENST00000561268 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
SPG11-224ENST00000561268 SPATA31A7Q8IWB4 1347 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms