RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 TRPM3Q9HCF6 1732 aaPredicted RBP26.73■■□□□ 1.87
TPM1-224ENST00000560615 ATP7BP35670 1465 aa26.72■■□□□ 1.87
TPM1-224ENST00000560615 ARHGEF28Q8N1W1 1705 aaKnown RBP26.71■■□□□ 1.87
TPM1-224ENST00000560615 ABCA3Q99758 1704 aa26.71■■□□□ 1.87
TPM1-224ENST00000560615 ALS2Q96Q42 1657 aa26.7■■□□□ 1.87
TPM1-224ENST00000560615 FAM98CQ17RN3 349 aaKnown RBP26.7■■□□□ 1.86
TPM1-224ENST00000560615 PLEKHG3A1L390 1219 aa26.69■■□□□ 1.86
TPM1-224ENST00000560615 ITSN1Q15811 1721 aa26.69■■□□□ 1.86
TPM1-224ENST00000560615 NBPF8Q3BBV2 869 aa26.69■■□□□ 1.86
TPM1-224ENST00000560615 KIAA1210Q9ULL0 1709 aa26.69■■□□□ 1.86
TPM1-224ENST00000560615 COL14A1Q05707 1796 aaKnown RBP26.69■■□□□ 1.86
TPM1-224ENST00000560615 ACEP12821 1306 aa26.68■■□□□ 1.86
TPM1-224ENST00000560615 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
TPM1-224ENST00000560615 CENPJQ9HC77 1338 aaPredicted RBP26.67■■□□□ 1.86
TPM1-224ENST00000560615 NBPF1Q3BBV0 1214 aa26.67■■□□□ 1.86
TPM1-224ENST00000560615 POLR3AO14802 1390 aaPredicted RBP26.67■■□□□ 1.86
TPM1-224ENST00000560615 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
TPM1-224ENST00000560615 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
TPM1-224ENST00000560615 BAG6P46379 1132 aa26.64■■□□□ 1.86
TPM1-224ENST00000560615 ABTB2Q8N961 1025 aa26.64■■□□□ 1.86
TPM1-224ENST00000560615 KIAA0232Q92628 1395 aa26.63■■□□□ 1.85
TPM1-224ENST00000560615 DEFB132Q7Z7B7 95 aa26.63■■□□□ 1.85
TPM1-224ENST00000560615 EVA1CP58658 441 aa26.62■■□□□ 1.85
TPM1-224ENST00000560615 ZC3H6P61129 1189 aaKnown RBP26.61■■□□□ 1.85
TPM1-224ENST00000560615 NUTM2GQ5VZR2 741 aa26.61■■□□□ 1.85
TPM1-224ENST00000560615 NLRP13Q86W25 1043 aa26.61■■□□□ 1.85
TPM1-224ENST00000560615 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
TPM1-224ENST00000560615 BRD4O60885 1362 aaPredicted RBP26.59■■□□□ 1.85
TPM1-224ENST00000560615 NRAPQ86VF7 1730 aa26.59■■□□□ 1.85
TPM1-224ENST00000560615 CHRNA2Q15822 529 aa26.59■■□□□ 1.85
TPM1-224ENST00000560615 BRWD3Q6RI45 1802 aa26.59■■□□□ 1.85
TPM1-224ENST00000560615 EP400Q96L91 3159 aa26.58■■□□□ 1.85
TPM1-224ENST00000560615 L3MBTL2Q969R5 705 aa26.58■■□□□ 1.85
TPM1-224ENST00000560615 CABP2Q9NPB3 220 aa26.57■■□□□ 1.84
TPM1-224ENST00000560615 SPATA31A1Q5TZJ5 1347 aa26.57■■□□□ 1.84
TPM1-224ENST00000560615 PPIP5K1Q6PFW1 1433 aa26.56■■□□□ 1.84
TPM1-224ENST00000560615 EVC2Q86UK5 1308 aa26.54■■□□□ 1.84
TPM1-224ENST00000560615 TOPAZ1Q8N9V7 1692 aa26.53■■□□□ 1.84
TPM1-224ENST00000560615 CRYBG1Q9Y4K1 1723 aa26.53■■□□□ 1.84
TPM1-224ENST00000560615 CPDO75976 1380 aa26.51■■□□□ 1.83
TPM1-224ENST00000560615 USP19O94966 1318 aa26.51■■□□□ 1.83
TPM1-224ENST00000560615 NEUROD1Q13562 356 aa26.51■■□□□ 1.83
TPM1-224ENST00000560615 FAM196AQ6ZSG2 479 aa26.51■■□□□ 1.83
TPM1-224ENST00000560615 CABP1Q9NZU7 370 aa26.51■■□□□ 1.83
TPM1-224ENST00000560615 GCP02774 474 aa26.5■■□□□ 1.83
TPM1-224ENST00000560615 BARGINQ6ZT62 677 aa26.5■■□□□ 1.83
TPM1-224ENST00000560615 USP35Q9P2H5 1018 aa26.5■■□□□ 1.83
TPM1-224ENST00000560615 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
TPM1-224ENST00000560615 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
TPM1-224ENST00000560615 PHRF1Q9P1Y6 1649 aaKnown RBP26.49■■□□□ 1.83
TPM1-224ENST00000560615 ROCK2O75116 1388 aaKnown RBP26.48■■□□□ 1.83
TPM1-224ENST00000560615 NLRP6P59044 892 aa26.47■■□□□ 1.83
TPM1-224ENST00000560615 FAM182BQ5T319 152 aa26.47■■□□□ 1.83
TPM1-224ENST00000560615 TCP11L2Q8N4U5 519 aa26.47■■□□□ 1.83
TPM1-224ENST00000560615 ZNF692Q9BU19 519 aaPredicted RBP26.47■■□□□ 1.83
TPM1-224ENST00000560615 THRAP3Q9Y2W1 955 aaKnown RBP26.47■■□□□ 1.83
TPM1-224ENST00000560615 SSH2Q76I76 1423 aa26.47■■□□□ 1.83
TPM1-224ENST00000560615 EN1Q05925 392 aaPredicted RBP26.45■■□□□ 1.82
TPM1-224ENST00000560615 THSD7AQ9UPZ6 1657 aa26.44■■□□□ 1.82
TPM1-224ENST00000560615 USP6P35125 1406 aa26.44■■□□□ 1.82
TPM1-224ENST00000560615 C11orf95C9JLR9 678 aaPredicted RBP26.43■■□□□ 1.82
TPM1-224ENST00000560615 LARP1Q6PKG0 1096 aaKnown RBP26.43■■□□□ 1.82
TPM1-224ENST00000560615 NRKQ7Z2Y5 1582 aa26.42■■□□□ 1.82
TPM1-224ENST00000560615 QRICH2Q9H0J4 1663 aa26.42■■□□□ 1.82
TPM1-224ENST00000560615 ZBTB7CA1YPR0 619 aa26.42■■□□□ 1.82
TPM1-224ENST00000560615 TRIM37O94972 964 aa26.4■■□□□ 1.82
TPM1-224ENST00000560615 DISP2A7MBM2 1401 aa26.39■■□□□ 1.82
TPM1-224ENST00000560615 RGPD1P0DJD0 1748 aa26.39■■□□□ 1.82
TPM1-224ENST00000560615 CAMTA1Q9Y6Y1 1673 aa26.39■■□□□ 1.82
TPM1-224ENST00000560615 KCNH5Q8NCM2 988 aa26.38■■□□□ 1.81
TPM1-224ENST00000560615 AATKQ6ZMQ8 1374 aa26.37■■□□□ 1.81
TPM1-224ENST00000560615 APBA3O96018 575 aa26.37■■□□□ 1.81
TPM1-224ENST00000560615 PSDA5PKW4 1024 aaPredicted RBP26.36■■□□□ 1.81
TPM1-224ENST00000560615 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
TPM1-224ENST00000560615 PARD3Q8TEW0 1356 aa26.35■■□□□ 1.81
TPM1-224ENST00000560615 CRB1P82279 1406 aa26.35■■□□□ 1.81
TPM1-224ENST00000560615 TTC21AQ8NDW8 1320 aa26.35■■□□□ 1.81
TPM1-224ENST00000560615 EZH2Q15910 746 aaKnown RBP26.33■■□□□ 1.81
TPM1-224ENST00000560615 TOM1L2Q6ZVM7 507 aa26.33■■□□□ 1.81
TPM1-224ENST00000560615 COL5A2P05997 1499 aaPredicted RBP26.33■■□□□ 1.81
TPM1-224ENST00000560615 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
TPM1-224ENST00000560615 LMO7Q8WWI1 1683 aa26.32■■□□□ 1.8
TPM1-224ENST00000560615 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
TPM1-224ENST00000560615 CAMKK2Q96RR4 588 aa26.31■■□□□ 1.8
TPM1-224ENST00000560615 SLIT3O75094 1523 aa26.3■■□□□ 1.8
TPM1-224ENST00000560615 R3HDM1Q15032 1099 aaKnown RBP26.3■■□□□ 1.8
TPM1-224ENST00000560615 SRCAPQ6ZRS2 3230 aa26.29■■□□□ 1.8
TPM1-224ENST00000560615 NBPF14Q5TI25 921 aa26.29■■□□□ 1.8
TPM1-224ENST00000560615 CDCA7Q9BWT1 371 aaPredicted RBP26.29■■□□□ 1.8
TPM1-224ENST00000560615 KTN1Q86UP2 1357 aaKnown RBP26.28■■□□□ 1.8
TPM1-224ENST00000560615 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
TPM1-224ENST00000560615 SBNO2Q9Y2G9 1366 aa26.28■■□□□ 1.8
TPM1-224ENST00000560615 DDB1Q16531 1140 aa26.27■■□□□ 1.8
TPM1-224ENST00000560615 WDR17Q8IZU2 1322 aa26.26■■□□□ 1.79
TPM1-224ENST00000560615 CSB-PGBD3P0DP91 1061 aa26.26■■□□□ 1.79
TPM1-224ENST00000560615 ARHGEF25Q86VW2 580 aa26.26■■□□□ 1.79
TPM1-224ENST00000560615 LRP5O75197 1615 aa26.25■■□□□ 1.79
TPM1-224ENST00000560615 CPSF1Q10570 1443 aaKnown RBP26.24■■□□□ 1.79
TPM1-224ENST00000560615 SOX12O15370 315 aa26.24■■□□□ 1.79
TPM1-224ENST00000560615 HDGFL2Q7Z4V5 671 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms