RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 IGHDP01880 384 aa31.63■■■□□ 2.65
SHF-207ENST00000560540 TBX22Q9Y458 520 aa31.63■■■□□ 2.65
SHF-207ENST00000560540 GSE1Q14687 1217 aa31.63■■■□□ 2.65
SHF-207ENST00000560540 PRAM1Q96QH2 718 aa31.63■■■□□ 2.65
SHF-207ENST00000560540 ABCC11Q96J66 1382 aa31.62■■■□□ 2.65
SHF-207ENST00000560540 RUNDC1Q96C34 613 aa31.61■■■□□ 2.65
SHF-207ENST00000560540 LMTK3Q96Q04 1460 aa31.61■■■□□ 2.65
SHF-207ENST00000560540 PHF23Q9BUL5 403 aaPredicted RBP31.61■■■□□ 2.65
SHF-207ENST00000560540 MORC1Q86VD1 984 aa31.6■■■□□ 2.65
SHF-207ENST00000560540 PTPRUQ92729 1446 aa31.6■■■□□ 2.65
SHF-207ENST00000560540 CANXP27824 592 aaKnown RBP31.59■■■□□ 2.65
SHF-207ENST00000560540 WAPLQ7Z5K2 1190 aa31.59■■■□□ 2.65
SHF-207ENST00000560540 DIP2AQ14689 1571 aa31.57■■■□□ 2.64
SHF-207ENST00000560540 POGKQ9P215 609 aa31.57■■■□□ 2.64
SHF-207ENST00000560540 NPHP4O75161 1426 aaPredicted RBP31.57■■■□□ 2.64
SHF-207ENST00000560540 NCBP3Q53F19 620 aaKnown RBP31.56■■■□□ 2.64
SHF-207ENST00000560540 DLC1Q96QB1 1528 aa31.56■■■□□ 2.64
SHF-207ENST00000560540 WDR63Q8IWG1 891 aa31.56■■■□□ 2.64
SHF-207ENST00000560540 USP19O94966 1318 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 CCDC27Q2M243 656 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 IL27Q8NEV9 243 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 COG6Q9Y2V7 657 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 ADGRB2O60241 1585 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 TECPR2O15040 1411 aa31.54■■■□□ 2.64
SHF-207ENST00000560540 PANK1Q8TE04 598 aa31.53■■■□□ 2.64
SHF-207ENST00000560540 RARSP54136 660 aaKnown RBP31.53■■■□□ 2.64
SHF-207ENST00000560540 ROBO2Q9HCK4 1378 aa31.53■■■□□ 2.64
SHF-207ENST00000560540 KNDC1Q76NI1 1749 aa31.52■■■□□ 2.64
SHF-207ENST00000560540 PMFBP1Q8TBY8 1022 aa31.52■■■□□ 2.64
SHF-207ENST00000560540 PUS7Q96PZ0 661 aaKnown RBP31.52■■■□□ 2.64
SHF-207ENST00000560540 AMOTL2Q9Y2J4 779 aa31.52■■■□□ 2.64
SHF-207ENST00000560540 NSD2O96028 1365 aa31.52■■■□□ 2.64
SHF-207ENST00000560540 MINK1Q8N4C8 1332 aaPredicted RBP31.51■■■□□ 2.64
SHF-207ENST00000560540 TCP11L2Q8N4U5 519 aa31.5■■■□□ 2.63
SHF-207ENST00000560540 CPS1P31327 1500 aa31.5■■■□□ 2.63
SHF-207ENST00000560540 SLC12A5Q9H2X9 1139 aa31.48■■■□□ 2.63
SHF-207ENST00000560540 TULP4Q9NRJ4 1543 aa31.48■■■□□ 2.63
SHF-207ENST00000560540 CFAP53Q96M91 514 aa31.48■■■□□ 2.63
SHF-207ENST00000560540 FAM135BQ49AJ0 1406 aa31.46■■■□□ 2.63
SHF-207ENST00000560540 FRAT1Q92837 279 aaPredicted RBP31.45■■■□□ 2.62
SHF-207ENST00000560540 ANKRD36BQ8N2N9 1353 aa31.45■■■□□ 2.62
SHF-207ENST00000560540 SIRT1Q96EB6 747 aa31.44■■■□□ 2.62
SHF-207ENST00000560540 KCNA6P17658 529 aa31.44■■■□□ 2.62
SHF-207ENST00000560540 PIK3R4Q99570 1358 aa31.43■■■□□ 2.62
SHF-207ENST00000560540 XRN1Q8IZH2 1706 aaKnown RBP31.43■■■□□ 2.62
SHF-207ENST00000560540 RRP7AQ9Y3A4 280 aaKnown RBP31.42■■■□□ 2.62
SHF-207ENST00000560540 EVC2Q86UK5 1308 aa31.42■■■□□ 2.62
SHF-207ENST00000560540 MTHFSP49914 203 aa31.42■■■□□ 2.62
SHF-207ENST00000560540 NEUROD2Q15784 382 aa31.41■■■□□ 2.62
SHF-207ENST00000560540 TNNT2P45379 298 aaPredicted RBP31.4■■■□□ 2.62
SHF-207ENST00000560540 BECN1Q14457 450 aa31.4■■■□□ 2.62
SHF-207ENST00000560540 FRAT2O75474 233 aaPredicted RBP31.4■■■□□ 2.62
SHF-207ENST00000560540 MYH16Q9H6N6 1097 aa31.4■■■□□ 2.62
SHF-207ENST00000560540 CABP2Q9NPB3 220 aa31.4■■■□□ 2.62
SHF-207ENST00000560540 CHD2O14647 1828 aaKnown RBP31.4■■■□□ 2.62
SHF-207ENST00000560540 STRCQ7RTU9 1775 aa31.38■■■□□ 2.61
SHF-207ENST00000560540 PTCH1Q13635 1447 aa31.38■■■□□ 2.61
SHF-207ENST00000560540 RLBP1P12271 317 aa31.37■■■□□ 2.61
SHF-207ENST00000560540 SEC24BO95487 1268 aa31.37■■■□□ 2.61
SHF-207ENST00000560540 PCDHB15Q9Y5E8 787 aa31.37■■■□□ 2.61
SHF-207ENST00000560540 ANKRD26Q9UPS8 1709 aa31.36■■■□□ 2.61
SHF-207ENST00000560540 CT47B1P0C2W7 299 aaPredicted RBP31.36■■■□□ 2.61
SHF-207ENST00000560540 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.36■■■□□ 2.61
SHF-207ENST00000560540 SRPK2P78362 688 aaKnown RBP31.35■■■□□ 2.61
SHF-207ENST00000560540 CDK19Q9BWU1 502 aa31.34■■■□□ 2.61
SHF-207ENST00000560540 RWDD1Q9H446 243 aaPredicted RBP31.34■■■□□ 2.61
SHF-207ENST00000560540 RBM33Q96EV2 1170 aaKnown RBP31.31■■■□□ 2.6
SHF-207ENST00000560540 UPF2Q9HAU5 1272 aaKnown RBP31.31■■■□□ 2.6
SHF-207ENST00000560540 PDZRN3Q9UPQ7 1066 aa31.31■■■□□ 2.6
SHF-207ENST00000560540 TNNQ9UQP3 1299 aa31.3■■■□□ 2.6
SHF-207ENST00000560540 MVPQ14764 893 aaKnown RBP31.29■■■□□ 2.6
SHF-207ENST00000560540 WASLO00401 505 aaPredicted RBP31.29■■■□□ 2.6
SHF-207ENST00000560540 TBC1D32Q96NH3 1257 aa31.29■■■□□ 2.6
SHF-207ENST00000560540 BRPF3Q9ULD4 1205 aa31.29■■■□□ 2.6
SHF-207ENST00000560540 COL3A1P02461 1466 aaPredicted RBP31.27■■■□□ 2.6
SHF-207ENST00000560540 ZKSCAN2Q63HK3 967 aa31.26■■■□□ 2.6
SHF-207ENST00000560540 BCL2L13Q9BXK5 485 aa31.26■■■□□ 2.6
SHF-207ENST00000560540 U2AF1L5P0DN76 240 aaPredicted RBP31.26■■■□□ 2.59
SHF-207ENST00000560540 U2AF1Q01081 240 aaKnown RBP eCLIP31.26■■■□□ 2.59
SHF-207ENST00000560540 RTN4Q9NQC3 1192 aaKnown RBP31.25■■■□□ 2.59
SHF-207ENST00000560540 NWD1Q149M9 1564 aa31.24■■■□□ 2.59
SHF-207ENST00000560540 DZIP1LQ8IYY4 767 aaKnown RBP31.21■■■□□ 2.59
SHF-207ENST00000560540 A0A1W2PP64 1363 aa31.21■■■□□ 2.59
SHF-207ENST00000560540 ATAD2Q6PL18 1390 aa31.21■■■□□ 2.59
SHF-207ENST00000560540 ANTXR1Q9H6X2 564 aa31.2■■■□□ 2.59
SHF-207ENST00000560540 STRCP1A6NGW2 1772 aa31.2■■■□□ 2.59
SHF-207ENST00000560540 FTSJ3Q8IY81 847 aaKnown RBP31.2■■■□□ 2.58
SHF-207ENST00000560540 NUTM2FA1L443 756 aa31.19■■■□□ 2.58
SHF-207ENST00000560540 PLEKHF1Q96S99 279 aa31.18■■■□□ 2.58
SHF-207ENST00000560540 IL16Q14005 1332 aa31.18■■■□□ 2.58
SHF-207ENST00000560540 PRR36Q9H6K5 1346 aa31.17■■■□□ 2.58
SHF-207ENST00000560540 CABP1Q9NZU7 370 aa31.17■■■□□ 2.58
SHF-207ENST00000560540 NUDT16Q96DE0 195 aaKnown RBP31.16■■■□□ 2.58
SHF-207ENST00000560540 NALCNQ8IZF0 1738 aa31.16■■■□□ 2.58
SHF-207ENST00000560540 HDAC1Q13547 482 aaPredicted RBP31.15■■■□□ 2.58
SHF-207ENST00000560540 PROSER2Q86WR7 435 aaPredicted RBP31.14■■■□□ 2.58
SHF-207ENST00000560540 KIF20BQ96Q89 1820 aa31.14■■■□□ 2.57
SHF-207ENST00000560540 ATP7BP35670 1465 aa31.14■■■□□ 2.57
SHF-207ENST00000560540 TMPOP42166 694 aaKnown RBP31.13■■■□□ 2.57
SHF-207ENST00000560540 TBC1D2Q9BYX2 928 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms