RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 COG3Q96JB2 828 aa29.88■■■□□ 2.37
PBX1-218ENST00000560469 SSH2Q76I76 1423 aa29.86■■■□□ 2.37
PBX1-218ENST00000560469 AATKQ6ZMQ8 1374 aa29.86■■■□□ 2.37
PBX1-218ENST00000560469 NGDNQ8NEJ9 315 aaKnown RBP29.85■■■□□ 2.37
PBX1-218ENST00000560469 TTC21AQ8NDW8 1320 aa29.85■■■□□ 2.37
PBX1-218ENST00000560469 NEFLP07196 543 aa29.85■■■□□ 2.37
PBX1-218ENST00000560469 PMFBP1Q8TBY8 1022 aa29.85■■■□□ 2.37
PBX1-218ENST00000560469 SALL2Q9Y467 1007 aaPredicted RBP29.85■■■□□ 2.37
PBX1-218ENST00000560469 COL3A1P02461 1466 aaPredicted RBP29.84■■■□□ 2.37
PBX1-218ENST00000560469 NGEFQ8N5V2 710 aa29.84■■■□□ 2.37
PBX1-218ENST00000560469 PNPLA6Q8IY17 1366 aa29.84■■■□□ 2.37
PBX1-218ENST00000560469 LMTK3Q96Q04 1460 aa29.82■■■□□ 2.36
PBX1-218ENST00000560469 CCDC146Q8IYE0 955 aa29.81■■■□□ 2.36
PBX1-218ENST00000560469 SUPT16HQ9Y5B9 1047 aaKnown RBP29.81■■■□□ 2.36
PBX1-218ENST00000560469 MAP2P11137 1827 aaKnown RBP29.8■■■□□ 2.36
PBX1-218ENST00000560469 HSPA2P54652 639 aa29.8■■■□□ 2.36
PBX1-218ENST00000560469 PROSER2Q86WR7 435 aaPredicted RBP29.8■■■□□ 2.36
PBX1-218ENST00000560469 POLKQ9UBT6 870 aa29.8■■■□□ 2.36
PBX1-218ENST00000560469 ZRANB1Q9UGI0 708 aa29.8■■■□□ 2.36
PBX1-218ENST00000560469 C14orf37Q86TY3 774 aa29.79■■■□□ 2.36
PBX1-218ENST00000560469 RBM33Q96EV2 1170 aaKnown RBP29.79■■■□□ 2.36
PBX1-218ENST00000560469 OVOS2A0A0J9YW53 1432 aa29.78■■■□□ 2.36
PBX1-218ENST00000560469 OVOS2Q6IE36 1432 aa29.78■■■□□ 2.36
PBX1-218ENST00000560469 RUNDC1Q96C34 613 aa29.77■■■□□ 2.36
PBX1-218ENST00000560469 APAF1O14727 1248 aa29.76■■■□□ 2.35
PBX1-218ENST00000560469 DIAPH1O60610 1272 aaKnown RBP29.76■■■□□ 2.35
PBX1-218ENST00000560469 PHF8Q9UPP1 1060 aa29.75■■■□□ 2.35
PBX1-218ENST00000560469 CDK12Q9NYV4 1490 aaPredicted RBP29.74■■■□□ 2.35
PBX1-218ENST00000560469 U2AF1L5P0DN76 240 aaPredicted RBP29.74■■■□□ 2.35
PBX1-218ENST00000560469 U2AF1Q01081 240 aaKnown RBP eCLIP29.74■■■□□ 2.35
PBX1-218ENST00000560469 ZNF521Q96K83 1311 aa29.73■■■□□ 2.35
PBX1-218ENST00000560469 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
PBX1-218ENST00000560469 FKBP8Q14318 412 aa29.72■■■□□ 2.35
PBX1-218ENST00000560469 USP31Q70CQ4 1352 aa29.72■■■□□ 2.35
PBX1-218ENST00000560469 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.34
PBX1-218ENST00000560469 STRCQ7RTU9 1775 aa29.7■■■□□ 2.34
PBX1-218ENST00000560469 U2SURPO15042 1029 aaKnown RBP29.69■■■□□ 2.34
PBX1-218ENST00000560469 PPM1GO15355 546 aaPredicted RBP29.69■■■□□ 2.34
PBX1-218ENST00000560469 FBLN1P23142 703 aa29.69■■■□□ 2.34
PBX1-218ENST00000560469 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
PBX1-218ENST00000560469 EMILIN1Q9Y6C2 1016 aa29.69■■■□□ 2.34
PBX1-218ENST00000560469 IQSEC2Q5JU85 1478 aa29.69■■■□□ 2.34
PBX1-218ENST00000560469 NCBP3Q53F19 620 aaKnown RBP29.69■■■□□ 2.34
PBX1-218ENST00000560469 CDCA7LQ96GN5 454 aa29.68■■■□□ 2.34
PBX1-218ENST00000560469 PNNQ9H307 717 aaKnown RBP29.68■■■□□ 2.34
PBX1-218ENST00000560469 PIK3C2AO00443 1686 aa29.67■■■□□ 2.34
PBX1-218ENST00000560469 GOLGA2Q08379 1002 aa29.67■■■□□ 2.34
PBX1-218ENST00000560469 ESCO1Q5FWF5 840 aa29.66■■■□□ 2.34
PBX1-218ENST00000560469 USP54Q70EL1 1684 aa29.66■■■□□ 2.34
PBX1-218ENST00000560469 RRS1Q15050 365 aaKnown RBP29.64■■■□□ 2.34
PBX1-218ENST00000560469 TCP11L2Q8N4U5 519 aa29.64■■■□□ 2.34
PBX1-218ENST00000560469 DCCP43146 1447 aa29.64■■■□□ 2.34
PBX1-218ENST00000560469 TMEM94Q12767 1356 aa29.64■■■□□ 2.34
PBX1-218ENST00000560469 LRRC7Q96NW7 1537 aa29.63■■■□□ 2.33
PBX1-218ENST00000560469 PLEKHF1Q96S99 279 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 RNF123Q5XPI4 1314 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 FCHSD2O94868 740 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 IL13P35225 146 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 CCDC27Q2M243 656 aa29.6■■■□□ 2.33
PBX1-218ENST00000560469 C1orf167Q5SNV9 1468 aa29.59■■■□□ 2.33
PBX1-218ENST00000560469 NLRP6P59044 892 aa29.59■■■□□ 2.33
PBX1-218ENST00000560469 PSME1Q06323 249 aa29.59■■■□□ 2.33
PBX1-218ENST00000560469 ATF3P18847 181 aa29.58■■■□□ 2.33
PBX1-218ENST00000560469 SLFN5Q08AF3 891 aa29.58■■■□□ 2.33
PBX1-218ENST00000560469 ERICH6BQ5W0A0 696 aa29.58■■■□□ 2.33
PBX1-218ENST00000560469 WWC1Q8IX03 1113 aa29.58■■■□□ 2.33
PBX1-218ENST00000560469 MAPK8IP3Q9UPT6 1336 aa29.58■■■□□ 2.33
PBX1-218ENST00000560469 ABTB2Q8N961 1025 aa29.57■■■□□ 2.32
PBX1-218ENST00000560469 PHF23Q9BUL5 403 aaPredicted RBP29.57■■■□□ 2.32
PBX1-218ENST00000560469 PAK3O75914 559 aaPredicted RBP29.56■■■□□ 2.32
PBX1-218ENST00000560469 DUSP27Q5VZP5 1158 aa29.56■■■□□ 2.32
PBX1-218ENST00000560469 ORAI2Q96SN7 254 aa29.56■■■□□ 2.32
PBX1-218ENST00000560469 RCAN3Q9UKA8 241 aa29.56■■■□□ 2.32
PBX1-218ENST00000560469 MARF1Q9Y4F3 1742 aaKnown RBP29.55■■■□□ 2.32
PBX1-218ENST00000560469 E9PSI1 815 aa29.55■■■□□ 2.32
PBX1-218ENST00000560469 TRMT2AQ8IZ69 625 aaKnown RBP29.55■■■□□ 2.32
PBX1-218ENST00000560469 NEUROD2Q15784 382 aa29.53■■■□□ 2.32
PBX1-218ENST00000560469 WDR63Q8IWG1 891 aa29.53■■■□□ 2.32
PBX1-218ENST00000560469 RRP7AQ9Y3A4 280 aaKnown RBP29.53■■■□□ 2.32
PBX1-218ENST00000560469 PEAK1Q9H792 1746 aa29.53■■■□□ 2.32
PBX1-218ENST00000560469 MST1RQ04912 1400 aa29.52■■■□□ 2.32
PBX1-218ENST00000560469 NEFMP07197 916 aa29.52■■■□□ 2.32
PBX1-218ENST00000560469 CADPS2Q86UW7 1296 aa29.52■■■□□ 2.32
PBX1-218ENST00000560469 RSPH6AQ9H0K4 717 aa29.52■■■□□ 2.32
PBX1-218ENST00000560469 SBNO1A3KN83 1393 aa29.52■■■□□ 2.32
PBX1-218ENST00000560469 MSH6P52701 1360 aa29.51■■■□□ 2.31
PBX1-218ENST00000560469 MAP3K19Q56UN5 1328 aa29.5■■■□□ 2.31
PBX1-218ENST00000560469 KIF24Q5T7B8 1368 aa29.5■■■□□ 2.31
PBX1-218ENST00000560469 FLT4P35916 1363 aa29.5■■■□□ 2.31
PBX1-218ENST00000560469 TMPOP42166 694 aaKnown RBP29.5■■■□□ 2.31
PBX1-218ENST00000560469 SOX12O15370 315 aa29.49■■■□□ 2.31
PBX1-218ENST00000560469 FOXO3O43524 673 aa29.48■■■□□ 2.31
PBX1-218ENST00000560469 PRKAR2BP31323 418 aa29.47■■■□□ 2.31
PBX1-218ENST00000560469 IRX6P78412 446 aaPredicted RBP29.47■■■□□ 2.31
PBX1-218ENST00000560469 EIF4A2Q14240 407 aaKnown RBP29.47■■■□□ 2.31
PBX1-218ENST00000560469 XIRP1Q702N8 1843 aaKnown RBP29.47■■■□□ 2.31
PBX1-218ENST00000560469 NUTM2GQ5VZR2 741 aa29.47■■■□□ 2.31
PBX1-218ENST00000560469 SPINK5Q9NQ38 1064 aaPredicted RBP29.46■■■□□ 2.31
PBX1-218ENST00000560469 DMRT2Q9Y5R5 561 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms