RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
TNFAIP2-206ENST00000560428 PAK3O75914 559 aaPredicted RBP25.77■■□□□ 1.72
TNFAIP2-206ENST00000560428 SRPK2P78362 688 aaKnown RBP25.77■■□□□ 1.72
TNFAIP2-206ENST00000560428 ACEP12821 1306 aa25.77■■□□□ 1.72
TNFAIP2-206ENST00000560428 PLEKHG5O94827 1062 aa25.76■■□□□ 1.71
TNFAIP2-206ENST00000560428 GLI3P10071 1580 aa25.75■■□□□ 1.71
TNFAIP2-206ENST00000560428 RALGAPBQ86X10 1494 aa25.75■■□□□ 1.71
TNFAIP2-206ENST00000560428 COL14A1Q05707 1796 aaKnown RBP25.74■■□□□ 1.71
TNFAIP2-206ENST00000560428 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
TNFAIP2-206ENST00000560428 NBPF8Q3BBV2 869 aa25.74■■□□□ 1.71
TNFAIP2-206ENST00000560428 ATAD2Q6PL18 1390 aa25.73■■□□□ 1.71
TNFAIP2-206ENST00000560428 TONSLQ96HA7 1378 aa25.73■■□□□ 1.71
TNFAIP2-206ENST00000560428 FAM83GA6ND36 823 aa25.72■■□□□ 1.71
TNFAIP2-206ENST00000560428 VPS72Q15906 364 aa25.72■■□□□ 1.71
TNFAIP2-206ENST00000560428 CABP2Q9NPB3 220 aa25.72■■□□□ 1.71
TNFAIP2-206ENST00000560428 PHRF1Q9P1Y6 1649 aaKnown RBP25.72■■□□□ 1.71
TNFAIP2-206ENST00000560428 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
TNFAIP2-206ENST00000560428 EVC2Q86UK5 1308 aa25.71■■□□□ 1.71
TNFAIP2-206ENST00000560428 BRD4O60885 1362 aaPredicted RBP25.7■■□□□ 1.71
TNFAIP2-206ENST00000560428 SBNO2Q9Y2G9 1366 aa25.66■■□□□ 1.7
TNFAIP2-206ENST00000560428 BTG4Q9NY30 223 aa25.65■■□□□ 1.7
TNFAIP2-206ENST00000560428 ABTB2Q8N961 1025 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 PRDM11Q9NQV5 511 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 CABP1Q9NZU7 370 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 NRKQ7Z2Y5 1582 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 USP6P35125 1406 aa25.63■■□□□ 1.69
TNFAIP2-206ENST00000560428 ONECUT3O60422 494 aaPredicted RBP25.62■■□□□ 1.69
TNFAIP2-206ENST00000560428 CCDC9Q9Y3X0 531 aaKnown RBP25.62■■□□□ 1.69
TNFAIP2-206ENST00000560428 EP400Q96L91 3159 aa25.62■■□□□ 1.69
TNFAIP2-206ENST00000560428 USP19O94966 1318 aa25.62■■□□□ 1.69
TNFAIP2-206ENST00000560428 KIAA0232Q92628 1395 aa25.61■■□□□ 1.69
TNFAIP2-206ENST00000560428 BRWD3Q6RI45 1802 aa25.6■■□□□ 1.69
TNFAIP2-206ENST00000560428 NUTM2GQ5VZR2 741 aa25.6■■□□□ 1.69
TNFAIP2-206ENST00000560428 NLRP13Q86W25 1043 aa25.58■■□□□ 1.69
TNFAIP2-206ENST00000560428 SEPT12Q8IYM1 358 aa25.58■■□□□ 1.69
TNFAIP2-206ENST00000560428 AKAP12Q02952 1782 aa25.57■■□□□ 1.68
TNFAIP2-206ENST00000560428 SSH2Q76I76 1423 aa25.57■■□□□ 1.68
TNFAIP2-206ENST00000560428 CPDO75976 1380 aa25.56■■□□□ 1.68
TNFAIP2-206ENST00000560428 ZC3H6P61129 1189 aaKnown RBP25.55■■□□□ 1.68
TNFAIP2-206ENST00000560428 CCDC125Q86Z20 511 aa25.55■■□□□ 1.68
TNFAIP2-206ENST00000560428 ZNF692Q9BU19 519 aaPredicted RBP25.55■■□□□ 1.68
TNFAIP2-206ENST00000560428 SPATA31A5Q5VU36 1347 aa25.55■■□□□ 1.68
TNFAIP2-206ENST00000560428 SPATA31A7Q8IWB4 1347 aa25.55■■□□□ 1.68
TNFAIP2-206ENST00000560428 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
TNFAIP2-206ENST00000560428 LMO7Q8WWI1 1683 aa25.53■■□□□ 1.68
TNFAIP2-206ENST00000560428 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
TNFAIP2-206ENST00000560428 SLIT3O75094 1523 aa25.53■■□□□ 1.68
TNFAIP2-206ENST00000560428 CPSF1Q10570 1443 aaKnown RBP25.52■■□□□ 1.68
TNFAIP2-206ENST00000560428 GCP02774 474 aa25.51■■□□□ 1.67
TNFAIP2-206ENST00000560428 FAM98CQ17RN3 349 aaKnown RBP25.5■■□□□ 1.67
TNFAIP2-206ENST00000560428 THSD7AQ9UPZ6 1657 aa25.5■■□□□ 1.67
TNFAIP2-206ENST00000560428 NLRP6P59044 892 aa25.49■■□□□ 1.67
TNFAIP2-206ENST00000560428 KRT27Q7Z3Y8 459 aa25.49■■□□□ 1.67
TNFAIP2-206ENST00000560428 MON2Q7Z3U7 1717 aa25.49■■□□□ 1.67
TNFAIP2-206ENST00000560428 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
TNFAIP2-206ENST00000560428 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
TNFAIP2-206ENST00000560428 SPATA31A1Q5TZJ5 1347 aa25.48■■□□□ 1.67
TNFAIP2-206ENST00000560428 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
TNFAIP2-206ENST00000560428 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
TNFAIP2-206ENST00000560428 A0A0G2JS52 829 aa25.47■■□□□ 1.67
TNFAIP2-206ENST00000560428 MYT1Q01538 1121 aa25.47■■□□□ 1.67
TNFAIP2-206ENST00000560428 KTN1Q86UP2 1357 aaKnown RBP25.46■■□□□ 1.67
TNFAIP2-206ENST00000560428 PUS7Q96PZ0 661 aaKnown RBP25.46■■□□□ 1.67
TNFAIP2-206ENST00000560428 STRN4Q9NRL3 753 aa25.46■■□□□ 1.67
TNFAIP2-206ENST00000560428 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
TNFAIP2-206ENST00000560428 SLC24A1O60721 1099 aa25.43■■□□□ 1.66
TNFAIP2-206ENST00000560428 EVA1CP58658 441 aa25.43■■□□□ 1.66
TNFAIP2-206ENST00000560428 CD163L1Q9NR16 1453 aa25.42■■□□□ 1.66
TNFAIP2-206ENST00000560428 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
TNFAIP2-206ENST00000560428 COL5A2P05997 1499 aaPredicted RBP25.41■■□□□ 1.66
TNFAIP2-206ENST00000560428 TESK2Q96S53 571 aa25.41■■□□□ 1.66
TNFAIP2-206ENST00000560428 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
TNFAIP2-206ENST00000560428 USP54Q70EL1 1684 aa25.4■■□□□ 1.66
TNFAIP2-206ENST00000560428 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
TNFAIP2-206ENST00000560428 BARGINQ6ZT62 677 aa25.39■■□□□ 1.66
TNFAIP2-206ENST00000560428 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.66
TNFAIP2-206ENST00000560428 COL18A1P39060 1754 aa25.39■■□□□ 1.65
TNFAIP2-206ENST00000560428 LARP1Q6PKG0 1096 aaKnown RBP25.38■■□□□ 1.65
TNFAIP2-206ENST00000560428 NINLQ9Y2I6 1382 aa25.38■■□□□ 1.65
TNFAIP2-206ENST00000560428 SF3B2Q13435 895 aaKnown RBP25.37■■□□□ 1.65
TNFAIP2-206ENST00000560428 HDGFL2Q7Z4V5 671 aaPredicted RBP25.37■■□□□ 1.65
TNFAIP2-206ENST00000560428 TMC1Q8TDI8 760 aa25.37■■□□□ 1.65
TNFAIP2-206ENST00000560428 USP31Q70CQ4 1352 aa25.36■■□□□ 1.65
TNFAIP2-206ENST00000560428 THRAP3Q9Y2W1 955 aaKnown RBP25.36■■□□□ 1.65
TNFAIP2-206ENST00000560428 NFAT5O94916 1531 aa25.36■■□□□ 1.65
TNFAIP2-206ENST00000560428 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
TNFAIP2-206ENST00000560428 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
TNFAIP2-206ENST00000560428 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
TNFAIP2-206ENST00000560428 CRB1P82279 1406 aa25.35■■□□□ 1.65
TNFAIP2-206ENST00000560428 EDC4Q6P2E9 1401 aaKnown RBP25.35■■□□□ 1.65
TNFAIP2-206ENST00000560428 USP47Q96K76 1375 aa25.34■■□□□ 1.65
TNFAIP2-206ENST00000560428 ABCC6O95255 1503 aa25.34■■□□□ 1.65
TNFAIP2-206ENST00000560428 ARHGEF25Q86VW2 580 aa25.34■■□□□ 1.65
TNFAIP2-206ENST00000560428 USP35Q9P2H5 1018 aa25.34■■□□□ 1.65
TNFAIP2-206ENST00000560428 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
TNFAIP2-206ENST00000560428 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.65
TNFAIP2-206ENST00000560428 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
TNFAIP2-206ENST00000560428 A0A1W2PP64 1363 aa25.32■■□□□ 1.64
TNFAIP2-206ENST00000560428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms