RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
COPS2-207ENST00000560240 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
COPS2-207ENST00000560240 WASHC2AQ641Q2 1341 aa11.08□□□□□ -0.64
COPS2-207ENST00000560240 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
COPS2-207ENST00000560240 JCADQ9P266 1359 aa11.07□□□□□ -0.64
COPS2-207ENST00000560240 TMC1Q8TDI8 760 aa11.07□□□□□ -0.64
COPS2-207ENST00000560240 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
COPS2-207ENST00000560240 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
COPS2-207ENST00000560240 MED1Q15648 1581 aaPredicted RBP11.06□□□□□ -0.64
COPS2-207ENST00000560240 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
COPS2-207ENST00000560240 USP54Q70EL1 1684 aa11.05□□□□□ -0.64
COPS2-207ENST00000560240 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
COPS2-207ENST00000560240 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
COPS2-207ENST00000560240 XPCQ01831 940 aaPredicted RBP11.04□□□□□ -0.64
COPS2-207ENST00000560240 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
COPS2-207ENST00000560240 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
COPS2-207ENST00000560240 PIK3C2AO00443 1686 aa11.03□□□□□ -0.64
COPS2-207ENST00000560240 CRYBG1Q9Y4K1 1723 aa11.02□□□□□ -0.65
COPS2-207ENST00000560240 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
COPS2-207ENST00000560240 USP19O94966 1318 aa11.02□□□□□ -0.65
COPS2-207ENST00000560240 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
COPS2-207ENST00000560240 NLRP13Q86W25 1043 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 PANK3Q9H999 370 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
COPS2-207ENST00000560240 SLIT3O75094 1523 aa11□□□□□ -0.65
COPS2-207ENST00000560240 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
COPS2-207ENST00000560240 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
COPS2-207ENST00000560240 ABCA3Q99758 1704 aa11□□□□□ -0.65
COPS2-207ENST00000560240 NSD2O96028 1365 aa11□□□□□ -0.65
COPS2-207ENST00000560240 NPC1L1Q9UHC9 1359 aa11□□□□□ -0.65
COPS2-207ENST00000560240 MARF1Q9Y4F3 1742 aaKnown RBP10.99□□□□□ -0.65
COPS2-207ENST00000560240 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
COPS2-207ENST00000560240 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
COPS2-207ENST00000560240 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
COPS2-207ENST00000560240 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
COPS2-207ENST00000560240 FYB1O15117 783 aa10.98□□□□□ -0.65
COPS2-207ENST00000560240 NLRP6P59044 892 aa10.98□□□□□ -0.65
COPS2-207ENST00000560240 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
COPS2-207ENST00000560240 NME9Q86XW9 330 aa10.97□□□□□ -0.65
COPS2-207ENST00000560240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
COPS2-207ENST00000560240 KCNH5Q8NCM2 988 aa10.97□□□□□ -0.65
COPS2-207ENST00000560240 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
COPS2-207ENST00000560240 CPDO75976 1380 aa10.97□□□□□ -0.65
COPS2-207ENST00000560240 ANKRD26Q9UPS8 1709 aa10.96□□□□□ -0.65
COPS2-207ENST00000560240 LRP6O75581 1613 aa10.96□□□□□ -0.65
COPS2-207ENST00000560240 ABCC6O95255 1503 aa10.96□□□□□ -0.65
COPS2-207ENST00000560240 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
COPS2-207ENST00000560240 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
COPS2-207ENST00000560240 NFAT5O94916 1531 aa10.95□□□□□ -0.66
COPS2-207ENST00000560240 GCP02774 474 aa10.95□□□□□ -0.66
COPS2-207ENST00000560240 COG3Q96JB2 828 aa10.95□□□□□ -0.66
COPS2-207ENST00000560240 AATKQ6ZMQ8 1374 aa10.93□□□□□ -0.66
COPS2-207ENST00000560240 CABLES1Q8TDN4 633 aa10.93□□□□□ -0.66
COPS2-207ENST00000560240 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
COPS2-207ENST00000560240 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
COPS2-207ENST00000560240 KIF24Q5T7B8 1368 aa10.92□□□□□ -0.66
COPS2-207ENST00000560240 NUTM2GQ5VZR2 741 aa10.92□□□□□ -0.66
COPS2-207ENST00000560240 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
COPS2-207ENST00000560240 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
COPS2-207ENST00000560240 ZRANB1Q9UGI0 708 aa10.92□□□□□ -0.66
COPS2-207ENST00000560240 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
COPS2-207ENST00000560240 SLIT2O94813 1529 aa10.91□□□□□ -0.66
COPS2-207ENST00000560240 HAP1P54257 671 aaPredicted RBP10.91□□□□□ -0.66
COPS2-207ENST00000560240 DDX10Q13206 875 aaKnown RBP10.91□□□□□ -0.66
COPS2-207ENST00000560240 LMO7Q8WWI1 1683 aa10.91□□□□□ -0.66
COPS2-207ENST00000560240 KIAA0232Q92628 1395 aa10.9□□□□□ -0.66
COPS2-207ENST00000560240 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.9□□□□□ -0.66
COPS2-207ENST00000560240 NUTM2BA6NNL0 878 aaPredicted RBP10.9□□□□□ -0.66
COPS2-207ENST00000560240 NUTM2EB1AL46 878 aaPredicted RBP10.9□□□□□ -0.66
COPS2-207ENST00000560240 NUTM2AQ8IVF1 878 aaPredicted RBP10.9□□□□□ -0.66
COPS2-207ENST00000560240 PRDM11Q9NQV5 511 aa10.9□□□□□ -0.66
COPS2-207ENST00000560240 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
COPS2-207ENST00000560240 COL18A1P39060 1754 aa10.9□□□□□ -0.67
COPS2-207ENST00000560240 RTL1A6NKG5 1358 aa10.9□□□□□ -0.67
COPS2-207ENST00000560240 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
COPS2-207ENST00000560240 ADAMTS2O95450 1211 aa10.89□□□□□ -0.67
COPS2-207ENST00000560240 LTN1O94822 1766 aa10.89□□□□□ -0.67
COPS2-207ENST00000560240 BLMP54132 1417 aaPredicted RBP10.89□□□□□ -0.67
COPS2-207ENST00000560240 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
COPS2-207ENST00000560240 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
COPS2-207ENST00000560240 MEX3CQ5U5Q3 659 aaKnown RBP10.88□□□□□ -0.67
COPS2-207ENST00000560240 MORC1Q86VD1 984 aa10.88□□□□□ -0.67
COPS2-207ENST00000560240 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 MAP3K19Q56UN5 1328 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 C8orf37Q96NL8 207 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 CAMTA1Q9Y6Y1 1673 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 NRAPQ86VF7 1730 aa10.87□□□□□ -0.67
COPS2-207ENST00000560240 ZNF772Q68DY9 489 aaPredicted RBP10.86□□□□□ -0.67
COPS2-207ENST00000560240 IP6K1Q92551 441 aa10.86□□□□□ -0.67
COPS2-207ENST00000560240 FLT4P35916 1363 aa10.86□□□□□ -0.67
COPS2-207ENST00000560240 COL5A2P05997 1499 aaPredicted RBP10.86□□□□□ -0.67
COPS2-207ENST00000560240 AFF2P51816 1311 aa10.85□□□□□ -0.67
COPS2-207ENST00000560240 RALBP1Q15311 655 aa10.85□□□□□ -0.67
COPS2-207ENST00000560240 CC2D1BQ5T0F9 858 aaKnown RBP10.85□□□□□ -0.67
COPS2-207ENST00000560240 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms