RNA–Protein interactions for RNA: ENST00000559882.1

RNF31-219, Transcript of ring finger protein 31, human

TSL 4

Gene RNF31, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-219	ENST00000559882	ALS2	Q96Q42	1657 aa		32.21	■■■□□ 2.75
RNF31-219	ENST00000559882	BCL9L	Q86UU0	1499 aa		32.21	■■■□□ 2.75
RNF31-219	ENST00000559882	ATRN	O75882	1429 aa		32.2	■■■□□ 2.75
RNF31-219	ENST00000559882	ABCA3	Q99758	1704 aa		32.19	■■■□□ 2.74
RNF31-219	ENST00000559882	SLIT2	O94813	1529 aa		32.18	■■■□□ 2.74
RNF31-219	ENST00000559882	RGS12	O14924	1447 aa		32.17	■■■□□ 2.74
RNF31-219	ENST00000559882	UNC5CL	Q8IV45	518 aa		32.15	■■■□□ 2.74
RNF31-219	ENST00000559882	CABP1	Q9NZU7	370 aa		32.14	■■■□□ 2.74
RNF31-219	ENST00000559882	SBNO2	Q9Y2G9	1366 aa		32.13	■■■□□ 2.73
RNF31-219	ENST00000559882	CLSPN	Q9HAW4	1339 aa		32.12	■■■□□ 2.73
RNF31-219	ENST00000559882	FAM83G	A6ND36	823 aa		32.09	■■■□□ 2.73
RNF31-219	ENST00000559882	NUTM2G	Q5VZR2	741 aa		32.09	■■■□□ 2.73
RNF31-219	ENST00000559882	ATAD2	Q6PL18	1390 aa		32.08	■■■□□ 2.73
RNF31-219	ENST00000559882	GJD4	Q96KN9	370 aa	Predicted RBP	32.08	■■■□□ 2.73
RNF31-219	ENST00000559882	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.08	■■■□□ 2.73
RNF31-219	ENST00000559882	ABTB2	Q8N961	1025 aa		32.07	■■■□□ 2.72
RNF31-219	ENST00000559882	BRD4	O60885	1362 aa	Predicted RBP	32.07	■■■□□ 2.72
RNF31-219	ENST00000559882	USP6	P35125	1406 aa		32.06	■■■□□ 2.72
RNF31-219	ENST00000559882	PLCH1	Q4KWH8	1693 aa		32.05	■■■□□ 2.72
RNF31-219	ENST00000559882	CRYBG1	Q9Y4K1	1723 aa		32.04	■■■□□ 2.72
RNF31-219	ENST00000559882	PRDM11	Q9NQV5	511 aa		32.03	■■■□□ 2.72
RNF31-219	ENST00000559882	NWD2	Q9ULI1	1742 aa		32.02	■■■□□ 2.72
RNF31-219	ENST00000559882	VPS72	Q15906	364 aa		32.01	■■■□□ 2.71
RNF31-219	ENST00000559882	TIMELESS	Q9UNS1	1208 aa		32.01	■■■□□ 2.71
RNF31-219	ENST00000559882	BTG4	Q9NY30	223 aa		32	■■■□□ 2.71
RNF31-219	ENST00000559882	CCDC9	Q9Y3X0	531 aa	Known RBP	32	■■■□□ 2.71
RNF31-219	ENST00000559882	COL14A1	Q05707	1796 aa	Known RBP	31.99	■■■□□ 2.71
RNF31-219	ENST00000559882	KIAA0232	Q92628	1395 aa		31.99	■■■□□ 2.71
RNF31-219	ENST00000559882	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.99	■■■□□ 2.71
RNF31-219	ENST00000559882	NLRP13	Q86W25	1043 aa		31.98	■■■□□ 2.71
RNF31-219	ENST00000559882	CCER1	Q8TC90	406 aa	Predicted RBP	31.98	■■■□□ 2.71
RNF31-219	ENST00000559882	USP19	O94966	1318 aa		31.98	■■■□□ 2.71
RNF31-219	ENST00000559882	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.97	■■■□□ 2.71
RNF31-219	ENST00000559882	ZNF692	Q9BU19	519 aa	Predicted RBP	31.97	■■■□□ 2.71
RNF31-219	ENST00000559882	GLI3	P10071	1580 aa		31.97	■■■□□ 2.71
RNF31-219	ENST00000559882	ST20-MTHFS	A0A0A6YYL1	179 aa		31.96	■■■□□ 2.71
RNF31-219	ENST00000559882	ZC3H6	P61129	1189 aa	Known RBP	31.96	■■■□□ 2.71
RNF31-219	ENST00000559882	SSH2	Q76I76	1423 aa		31.96	■■■□□ 2.71
RNF31-219	ENST00000559882	NRK	Q7Z2Y5	1582 aa		31.94	■■■□□ 2.7
RNF31-219	ENST00000559882	CHRNA2	Q15822	529 aa		31.93	■■■□□ 2.7
RNF31-219	ENST00000559882	USP47	Q96K76	1375 aa		31.93	■■■□□ 2.7
RNF31-219	ENST00000559882	CPSF1	Q10570	1443 aa	Known RBP	31.92	■■■□□ 2.7
RNF31-219	ENST00000559882	NRAP	Q86VF7	1730 aa		31.92	■■■□□ 2.7
RNF31-219	ENST00000559882	NLRP6	P59044	892 aa		31.92	■■■□□ 2.7
RNF31-219	ENST00000559882	TMC1	Q8TDI8	760 aa		31.92	■■■□□ 2.7
RNF31-219	ENST00000559882	TESK2	Q96S53	571 aa		31.92	■■■□□ 2.7
RNF31-219	ENST00000559882	TTC21B	Q7Z4L5	1316 aa		31.91	■■■□□ 2.7
RNF31-219	ENST00000559882	KTN1	Q86UP2	1357 aa	Known RBP	31.91	■■■□□ 2.7
RNF31-219	ENST00000559882	GC	P02774	474 aa		31.89	■■■□□ 2.7
RNF31-219	ENST00000559882	SLC24A1	O60721	1099 aa		31.88	■■■□□ 2.69
RNF31-219	ENST00000559882	PUS7	Q96PZ0	661 aa	Known RBP	31.88	■■■□□ 2.69
RNF31-219	ENST00000559882	CPD	O75976	1380 aa		31.88	■■■□□ 2.69
RNF31-219	ENST00000559882	TTC21A	Q8NDW8	1320 aa		31.87	■■■□□ 2.69
RNF31-219	ENST00000559882	AKAP12	Q02952	1782 aa		31.86	■■■□□ 2.69
RNF31-219	ENST00000559882	PIK3C2A	O00443	1686 aa		31.86	■■■□□ 2.69
RNF31-219	ENST00000559882	SEPT12	Q8IYM1	358 aa		31.85	■■■□□ 2.69
RNF31-219	ENST00000559882	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.84	■■■□□ 2.69
RNF31-219	ENST00000559882	SLC12A5	Q9H2X9	1139 aa		31.84	■■■□□ 2.69
RNF31-219	ENST00000559882	SLIT3	O75094	1523 aa		31.84	■■■□□ 2.69
RNF31-219	ENST00000559882	CD163L1	Q9NR16	1453 aa		31.84	■■■□□ 2.69
RNF31-219	ENST00000559882	STRN4	Q9NRL3	753 aa		31.83	■■■□□ 2.69
RNF31-219	ENST00000559882	SPATA31A5	Q5VU36	1347 aa		31.82	■■■□□ 2.68
RNF31-219	ENST00000559882	SPATA31A7	Q8IWB4	1347 aa		31.82	■■■□□ 2.68
RNF31-219	ENST00000559882		A0A0G2JS52	829 aa		31.82	■■■□□ 2.68
RNF31-219	ENST00000559882	MYT1	Q01538	1121 aa		31.82	■■■□□ 2.68
RNF31-219	ENST00000559882	ONECUT3	O60422	494 aa	Predicted RBP	31.81	■■■□□ 2.68
RNF31-219	ENST00000559882	FAM98C	Q17RN3	349 aa	Known RBP	31.81	■■■□□ 2.68
RNF31-219	ENST00000559882	TERF2IP	Q9NYB0	399 aa		31.81	■■■□□ 2.68
RNF31-219	ENST00000559882	ZBTB7C	A1YPR0	619 aa		31.8	■■■□□ 2.68
RNF31-219	ENST00000559882	MON2	Q7Z3U7	1717 aa		31.8	■■■□□ 2.68
RNF31-219	ENST00000559882	NINL	Q9Y2I6	1382 aa		31.8	■■■□□ 2.68
RNF31-219	ENST00000559882	EVA1C	P58658	441 aa		31.79	■■■□□ 2.68
RNF31-219	ENST00000559882	TMF1	P82094	1093 aa		31.79	■■■□□ 2.68
RNF31-219	ENST00000559882	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.79	■■■□□ 2.68
RNF31-219	ENST00000559882		A0A1W2PP64	1363 aa		31.77	■■■□□ 2.68
RNF31-219	ENST00000559882	CAMTA1	Q9Y6Y1	1673 aa		31.76	■■■□□ 2.68
RNF31-219	ENST00000559882	SPATA31A1	Q5TZJ5	1347 aa		31.75	■■■□□ 2.67
RNF31-219	ENST00000559882	KCNH5	Q8NCM2	988 aa		31.75	■■■□□ 2.67
RNF31-219	ENST00000559882	LMO7	Q8WWI1	1683 aa		31.75	■■■□□ 2.67
RNF31-219	ENST00000559882	EDC4	Q6P2E9	1401 aa	Known RBP	31.75	■■■□□ 2.67
RNF31-219	ENST00000559882	SOX12	O15370	315 aa		31.74	■■■□□ 2.67
RNF31-219	ENST00000559882	AATK	Q6ZMQ8	1374 aa		31.72	■■■□□ 2.67
RNF31-219	ENST00000559882	KRT27	Q7Z3Y8	459 aa		31.72	■■■□□ 2.67
RNF31-219	ENST00000559882	NME9	Q86XW9	330 aa		31.72	■■■□□ 2.67
RNF31-219	ENST00000559882	LARP1	Q6PKG0	1096 aa	Known RBP	31.71	■■■□□ 2.67
RNF31-219	ENST00000559882	USP31	Q70CQ4	1352 aa		31.7	■■■□□ 2.67
RNF31-219	ENST00000559882	USP35	Q9P2H5	1018 aa		31.7	■■■□□ 2.67
RNF31-219	ENST00000559882	ZRANB1	Q9UGI0	708 aa		31.7	■■■□□ 2.67
RNF31-219	ENST00000559882	COL5A2	P05997	1499 aa	Predicted RBP	31.7	■■■□□ 2.66
RNF31-219	ENST00000559882	CDCA8	Q53HL2	280 aa		31.69	■■■□□ 2.66
RNF31-219	ENST00000559882	BRWD3	Q6RI45	1802 aa		31.68	■■■□□ 2.66
RNF31-219	ENST00000559882	ARHGEF25	Q86VW2	580 aa		31.67	■■■□□ 2.66
RNF31-219	ENST00000559882	NFAT5	O94916	1531 aa		31.65	■■■□□ 2.66
RNF31-219	ENST00000559882	THSD7A	Q9UPZ6	1657 aa		31.65	■■■□□ 2.66
RNF31-219	ENST00000559882	ANKRD36B	Q8N2N9	1353 aa		31.65	■■■□□ 2.66
RNF31-219	ENST00000559882	CCDC125	Q86Z20	511 aa		31.64	■■■□□ 2.66
RNF31-219	ENST00000559882	TCP11L2	Q8N4U5	519 aa		31.63	■■■□□ 2.65
RNF31-219	ENST00000559882	BARGIN	Q6ZT62	677 aa		31.62	■■■□□ 2.65
RNF31-219	ENST00000559882	USP54	Q70EL1	1684 aa		31.61	■■■□□ 2.65
RNF31-219	ENST00000559882	CRB1	P82279	1406 aa		31.61	■■■□□ 2.65

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