RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 NME9Q86XW9 330 aa19.32■□□□□ 0.68
RABGGTA-209ENST00000559551 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
RABGGTA-209ENST00000559551 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
RABGGTA-209ENST00000559551 ZNF692Q9BU19 519 aaPredicted RBP19.32■□□□□ 0.68
RABGGTA-209ENST00000559551 MAP2P11137 1827 aaKnown RBP19.32■□□□□ 0.68
RABGGTA-209ENST00000559551 NCOA3Q9Y6Q9 1424 aa19.31■□□□□ 0.68
RABGGTA-209ENST00000559551 MARF1Q9Y4F3 1742 aaKnown RBP19.31■□□□□ 0.68
RABGGTA-209ENST00000559551 C19orf44Q9H6X5 657 aa19.31■□□□□ 0.68
RABGGTA-209ENST00000559551 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
RABGGTA-209ENST00000559551 TTC21BQ7Z4L5 1316 aa19.3■□□□□ 0.68
RABGGTA-209ENST00000559551 PIK3C2AO00443 1686 aa19.3■□□□□ 0.68
RABGGTA-209ENST00000559551 MST1RQ04912 1400 aa19.29■□□□□ 0.68
RABGGTA-209ENST00000559551 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
RABGGTA-209ENST00000559551 ORAI2Q96SN7 254 aa19.28■□□□□ 0.68
RABGGTA-209ENST00000559551 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
RABGGTA-209ENST00000559551 DCCP43146 1447 aa19.28■□□□□ 0.68
RABGGTA-209ENST00000559551 FBLN1P23142 703 aa19.27■□□□□ 0.68
RABGGTA-209ENST00000559551 NGDNQ8NEJ9 315 aaKnown RBP19.27■□□□□ 0.68
RABGGTA-209ENST00000559551 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
RABGGTA-209ENST00000559551 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
RABGGTA-209ENST00000559551 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
RABGGTA-209ENST00000559551 ESCO1Q5FWF5 840 aa19.24■□□□□ 0.67
RABGGTA-209ENST00000559551 MTHFSP49914 203 aa19.24■□□□□ 0.67
RABGGTA-209ENST00000559551 KIF1AQ12756 1690 aa19.24■□□□□ 0.67
RABGGTA-209ENST00000559551 TRPM3Q9HCF6 1732 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-209ENST00000559551 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
RABGGTA-209ENST00000559551 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-209ENST00000559551 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
RABGGTA-209ENST00000559551 LTBP4Q8N2S1 1624 aa19.21■□□□□ 0.67
RABGGTA-209ENST00000559551 MSH6P52701 1360 aa19.21■□□□□ 0.67
RABGGTA-209ENST00000559551 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
RABGGTA-209ENST00000559551 ATF3P18847 181 aa19.2■□□□□ 0.66
RABGGTA-209ENST00000559551 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
RABGGTA-209ENST00000559551 BLMP54132 1417 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-209ENST00000559551 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
RABGGTA-209ENST00000559551 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
RABGGTA-209ENST00000559551 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
RABGGTA-209ENST00000559551 COG3Q96JB2 828 aa19.18■□□□□ 0.66
RABGGTA-209ENST00000559551 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
RABGGTA-209ENST00000559551 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-209ENST00000559551 FOXO3O43524 673 aa19.18■□□□□ 0.66
RABGGTA-209ENST00000559551 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
RABGGTA-209ENST00000559551 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
RABGGTA-209ENST00000559551 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
RABGGTA-209ENST00000559551 XPCQ01831 940 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-209ENST00000559551 EMILIN1Q9Y6C2 1016 aa19.16■□□□□ 0.66
RABGGTA-209ENST00000559551 INSRP06213 1382 aa19.16■□□□□ 0.66
RABGGTA-209ENST00000559551 ALS2Q96Q42 1657 aa19.15■□□□□ 0.66
RABGGTA-209ENST00000559551 DDX17Q92841 729 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-209ENST00000559551 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-209ENST00000559551 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
RABGGTA-209ENST00000559551 PSME1Q06323 249 aa19.13■□□□□ 0.65
RABGGTA-209ENST00000559551 FBXO41Q8TF61 875 aa19.13■□□□□ 0.65
RABGGTA-209ENST00000559551 PAK3O75914 559 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-209ENST00000559551 WDR43Q15061 677 aaKnown RBP eCLIP19.12■□□□□ 0.65
RABGGTA-209ENST00000559551 CDK12Q9NYV4 1490 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-209ENST00000559551 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
RABGGTA-209ENST00000559551 ABTB2Q8N961 1025 aa19.11■□□□□ 0.65
RABGGTA-209ENST00000559551 CERKQ8TCT0 537 aa19.11■□□□□ 0.65
RABGGTA-209ENST00000559551 NLRP6P59044 892 aa19.1■□□□□ 0.65
RABGGTA-209ENST00000559551 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
RABGGTA-209ENST00000559551 LTN1O94822 1766 aa19.1■□□□□ 0.65
RABGGTA-209ENST00000559551 PXDNQ92626 1479 aa19.1■□□□□ 0.65
RABGGTA-209ENST00000559551 BRINP3Q76B58 766 aa19.1■□□□□ 0.65
RABGGTA-209ENST00000559551 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
RABGGTA-209ENST00000559551 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
RABGGTA-209ENST00000559551 NFAT5O94916 1531 aa19.09■□□□□ 0.65
RABGGTA-209ENST00000559551 PPM1GO15355 546 aaPredicted RBP19.08■□□□□ 0.64
RABGGTA-209ENST00000559551 SOX12O15370 315 aa19.08■□□□□ 0.64
RABGGTA-209ENST00000559551 CCDC146Q8IYE0 955 aa19.07■□□□□ 0.64
RABGGTA-209ENST00000559551 CRYBG1Q9Y4K1 1723 aa19.07■□□□□ 0.64
RABGGTA-209ENST00000559551 NHSL1Q5SYE7 1610 aa19.06■□□□□ 0.64
RABGGTA-209ENST00000559551 MAP3K19Q56UN5 1328 aa19.06■□□□□ 0.64
RABGGTA-209ENST00000559551 SLIT3O75094 1523 aa19.06■□□□□ 0.64
RABGGTA-209ENST00000559551 MED1Q15648 1581 aaPredicted RBP19.06■□□□□ 0.64
RABGGTA-209ENST00000559551 RGPD1P0DJD0 1748 aa19.04■□□□□ 0.64
RABGGTA-209ENST00000559551 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
RABGGTA-209ENST00000559551 IL13P35225 146 aa19.04■□□□□ 0.64
RABGGTA-209ENST00000559551 NPHP3Q7Z494 1330 aa19.03■□□□□ 0.64
RABGGTA-209ENST00000559551 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
RABGGTA-209ENST00000559551 SBNO1A3KN83 1393 aa19.02■□□□□ 0.64
RABGGTA-209ENST00000559551 PHRF1Q9P1Y6 1649 aaKnown RBP19.02■□□□□ 0.64
RABGGTA-209ENST00000559551 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
RABGGTA-209ENST00000559551 USP19O94966 1318 aa19.02■□□□□ 0.64
RABGGTA-209ENST00000559551 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.63
RABGGTA-209ENST00000559551 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-209ENST00000559551 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
RABGGTA-209ENST00000559551 ROBO1Q9Y6N7 1651 aa19■□□□□ 0.63
RABGGTA-209ENST00000559551 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
RABGGTA-209ENST00000559551 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
RABGGTA-209ENST00000559551 APAF1O14727 1248 aa18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 RGPD5Q99666 1765 aa18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 SOS2Q07890 1332 aaPredicted RBP18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 SPATA31A3Q5VYP0 1347 aa18.99■□□□□ 0.63
RABGGTA-209ENST00000559551 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
RABGGTA-209ENST00000559551 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
RABGGTA-209ENST00000559551 FLT4P35916 1363 aa18.98■□□□□ 0.63
RABGGTA-209ENST00000559551 RGPD2P0DJD1 1756 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms