RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 GOLGA3Q08378 1498 aa11.05□□□□□ -0.64
ZEB1-216ENST00000559496 ABCA5Q8WWZ7 1642 aa11.04□□□□□ -0.64
ZEB1-216ENST00000559496 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
ZEB1-216ENST00000559496 GJA5P36382 358 aa11.04□□□□□ -0.64
ZEB1-216ENST00000559496 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
ZEB1-216ENST00000559496 DGAT1O75907 488 aa11.03□□□□□ -0.64
ZEB1-216ENST00000559496 JUNDP17535 347 aa11.03□□□□□ -0.64
ZEB1-216ENST00000559496 IGF1RP08069 1367 aa11.03□□□□□ -0.64
ZEB1-216ENST00000559496 GAPVD1Q14C86 1478 aa11.03□□□□□ -0.64
ZEB1-216ENST00000559496 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
ZEB1-216ENST00000559496 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
ZEB1-216ENST00000559496 ERICH3Q5RHP9 1530 aa11.01□□□□□ -0.65
ZEB1-216ENST00000559496 PKDCCQ504Y2 493 aa11.01□□□□□ -0.65
ZEB1-216ENST00000559496 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
ZEB1-216ENST00000559496 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
ZEB1-216ENST00000559496 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 SPTLC1O15269 473 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
ZEB1-216ENST00000559496 HRCP23327 699 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 FOXC1Q12948 553 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 TRIM32Q13049 653 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 MTMR2Q13614 643 aa11□□□□□ -0.65
ZEB1-216ENST00000559496 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
ZEB1-216ENST00000559496 CUL7Q14999 1698 aa10.99□□□□□ -0.65
ZEB1-216ENST00000559496 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.65
ZEB1-216ENST00000559496 CARMIL1Q5VZK9 1371 aa10.99□□□□□ -0.65
ZEB1-216ENST00000559496 TOR4AQ9NXH8 423 aa10.99□□□□□ -0.65
ZEB1-216ENST00000559496 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
ZEB1-216ENST00000559496 FAM187AA6NFU0 413 aa10.98□□□□□ -0.65
ZEB1-216ENST00000559496 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
ZEB1-216ENST00000559496 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
ZEB1-216ENST00000559496 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
ZEB1-216ENST00000559496 EIF4G3O43432 1585 aaKnown RBP10.97□□□□□ -0.65
ZEB1-216ENST00000559496 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
ZEB1-216ENST00000559496 PRR7Q8TB68 274 aa10.96□□□□□ -0.65
ZEB1-216ENST00000559496 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.65
ZEB1-216ENST00000559496 WNT7AO00755 349 aa10.95□□□□□ -0.66
ZEB1-216ENST00000559496 DESI1Q6ICB0 168 aa10.95□□□□□ -0.66
ZEB1-216ENST00000559496 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
ZEB1-216ENST00000559496 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
ZEB1-216ENST00000559496 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
ZEB1-216ENST00000559496 PTPRNQ16849 979 aa10.92□□□□□ -0.66
ZEB1-216ENST00000559496 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
ZEB1-216ENST00000559496 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
ZEB1-216ENST00000559496 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 AVPP01185 164 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
ZEB1-216ENST00000559496 WNT7BP56706 349 aa10.9□□□□□ -0.66
ZEB1-216ENST00000559496 SKOR1P84550 965 aa10.9□□□□□ -0.66
ZEB1-216ENST00000559496 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
ZEB1-216ENST00000559496 CRIPAKQ8N1N5 446 aa10.9□□□□□ -0.66
ZEB1-216ENST00000559496 EVA1BQ9NVM1 165 aa10.9□□□□□ -0.66
ZEB1-216ENST00000559496 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
ZEB1-216ENST00000559496 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.67
ZEB1-216ENST00000559496 AAASQ9NRG9 546 aa10.9□□□□□ -0.67
ZEB1-216ENST00000559496 LIMD1Q9UGP4 676 aa10.9□□□□□ -0.67
ZEB1-216ENST00000559496 ZNF787Q6DD87 383 aa10.89□□□□□ -0.67
ZEB1-216ENST00000559496 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
ZEB1-216ENST00000559496 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
ZEB1-216ENST00000559496 MAGI1Q96QZ7 1491 aaPredicted RBP10.88□□□□□ -0.67
ZEB1-216ENST00000559496 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
ZEB1-216ENST00000559496 SNIP1Q8TAD8 396 aaKnown RBP10.88□□□□□ -0.67
ZEB1-216ENST00000559496 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
ZEB1-216ENST00000559496 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
ZEB1-216ENST00000559496 CLIP1P30622 1438 aa10.87□□□□□ -0.67
ZEB1-216ENST00000559496 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
ZEB1-216ENST00000559496 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
ZEB1-216ENST00000559496 KCNH2Q12809 1159 aa10.87□□□□□ -0.67
ZEB1-216ENST00000559496 RC3H1Q5TC82 1133 aaKnown RBP10.87□□□□□ -0.67
ZEB1-216ENST00000559496 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-216ENST00000559496 NUTM2BA6NNL0 878 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-216ENST00000559496 NUTM2EB1AL46 878 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-216ENST00000559496 LILRB3O75022 631 aa10.86□□□□□ -0.67
ZEB1-216ENST00000559496 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-216ENST00000559496 NUTM2AQ8IVF1 878 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-216ENST00000559496 SMPD1P17405 629 aa10.85□□□□□ -0.67
ZEB1-216ENST00000559496 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
ZEB1-216ENST00000559496 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
ZEB1-216ENST00000559496 QPCTQ16769 361 aa10.85□□□□□ -0.67
ZEB1-216ENST00000559496 DDRGK1Q96HY6 314 aa10.85□□□□□ -0.67
ZEB1-216ENST00000559496 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
ZEB1-216ENST00000559496 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
ZEB1-216ENST00000559496 RANGAP1P46060 587 aaPredicted RBP10.84□□□□□ -0.67
ZEB1-216ENST00000559496 CTC1Q2NKJ3 1217 aa10.84□□□□□ -0.67
ZEB1-216ENST00000559496 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
ZEB1-216ENST00000559496 SYNJ2O15056 1496 aa10.84□□□□□ -0.67
ZEB1-216ENST00000559496 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
ZEB1-216ENST00000559496 SKIV2LQ15477 1246 aaKnown RBP10.82□□□□□ -0.68
ZEB1-216ENST00000559496 GRIN2AQ12879 1464 aa10.82□□□□□ -0.68
ZEB1-216ENST00000559496 POTECB2RU33 542 aa10.81□□□□□ -0.68
ZEB1-216ENST00000559496 J3QL48 77 aa10.81□□□□□ -0.68
ZEB1-216ENST00000559496 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
ZEB1-216ENST00000559496 SIAH2O43255 324 aa10.8□□□□□ -0.68
ZEB1-216ENST00000559496 CTHP32929 405 aa10.8□□□□□ -0.68
ZEB1-216ENST00000559496 SH3BP2P78314 561 aa10.8□□□□□ -0.68
ZEB1-216ENST00000559496 BAP1Q92560 729 aa10.8□□□□□ -0.68
ZEB1-216ENST00000559496 AXIN1O15169 862 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms