RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 PLEKHG3A1L390 1219 aa30.63■■■□□ 2.49
CRNDE-205ENST00000558952 UNC5CLQ8IV45 518 aa30.63■■■□□ 2.49
CRNDE-205ENST00000558952 EVC2Q86UK5 1308 aa30.61■■■□□ 2.49
CRNDE-205ENST00000558952 PPIP5K1Q6PFW1 1433 aa30.61■■■□□ 2.49
CRNDE-205ENST00000558952 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.61■■■□□ 2.49
CRNDE-205ENST00000558952 GJD4Q96KN9 370 aaPredicted RBP30.58■■■□□ 2.49
CRNDE-205ENST00000558952 CARD11Q9BXL7 1154 aa30.58■■■□□ 2.49
CRNDE-205ENST00000558952 PLCH1Q4KWH8 1693 aa30.55■■■□□ 2.48
CRNDE-205ENST00000558952 UPF1Q92900 1129 aaKnown RBP eCLIP30.55■■■□□ 2.48
CRNDE-205ENST00000558952 RALGAPBQ86X10 1494 aa30.55■■■□□ 2.48
CRNDE-205ENST00000558952 NWD2Q9ULI1 1742 aa30.53■■■□□ 2.48
CRNDE-205ENST00000558952 FAM83GA6ND36 823 aa30.53■■■□□ 2.48
CRNDE-205ENST00000558952 CABP1Q9NZU7 370 aa30.51■■■□□ 2.47
CRNDE-205ENST00000558952 CCDC9Q9Y3X0 531 aaKnown RBP30.51■■■□□ 2.47
CRNDE-205ENST00000558952 VPS72Q15906 364 aa30.5■■■□□ 2.47
CRNDE-205ENST00000558952 NUTM2GQ5VZR2 741 aa30.5■■■□□ 2.47
CRNDE-205ENST00000558952 ABTB2Q8N961 1025 aa30.5■■■□□ 2.47
CRNDE-205ENST00000558952 CRYBG1Q9Y4K1 1723 aa30.5■■■□□ 2.47
CRNDE-205ENST00000558952 COL14A1Q05707 1796 aaKnown RBP30.49■■■□□ 2.47
CRNDE-205ENST00000558952 PRDM11Q9NQV5 511 aa30.48■■■□□ 2.47
CRNDE-205ENST00000558952 BRD4O60885 1362 aaPredicted RBP30.48■■■□□ 2.47
CRNDE-205ENST00000558952 ATAD2Q6PL18 1390 aa30.48■■■□□ 2.47
CRNDE-205ENST00000558952 BTG4Q9NY30 223 aa30.47■■■□□ 2.47
CRNDE-205ENST00000558952 GLI3P10071 1580 aa30.46■■■□□ 2.47
CRNDE-205ENST00000558952 SBNO2Q9Y2G9 1366 aa30.45■■■□□ 2.47
CRNDE-205ENST00000558952 PHRF1Q9P1Y6 1649 aaKnown RBP30.45■■■□□ 2.47
CRNDE-205ENST00000558952 USP6P35125 1406 aa30.43■■■□□ 2.46
CRNDE-205ENST00000558952 KIAA0232Q92628 1395 aa30.42■■■□□ 2.46
CRNDE-205ENST00000558952 NLRP13Q86W25 1043 aa30.42■■■□□ 2.46
CRNDE-205ENST00000558952 PCGF6Q9BYE7 350 aa30.41■■■□□ 2.46
CRNDE-205ENST00000558952 NRAPQ86VF7 1730 aa30.41■■■□□ 2.46
CRNDE-205ENST00000558952 ZC3H6P61129 1189 aaKnown RBP30.4■■■□□ 2.46
CRNDE-205ENST00000558952 ZNF692Q9BU19 519 aaPredicted RBP30.39■■■□□ 2.46
CRNDE-205ENST00000558952 USP19O94966 1318 aa30.38■■■□□ 2.45
CRNDE-205ENST00000558952 CHRNA2Q15822 529 aa30.36■■■□□ 2.45
CRNDE-205ENST00000558952 SEPT12Q8IYM1 358 aa30.36■■■□□ 2.45
CRNDE-205ENST00000558952 NRKQ7Z2Y5 1582 aa30.36■■■□□ 2.45
CRNDE-205ENST00000558952 CLSPNQ9HAW4 1339 aa30.34■■■□□ 2.45
CRNDE-205ENST00000558952 A0A0G2JS52 829 aa30.34■■■□□ 2.45
CRNDE-205ENST00000558952 NLRP6P59044 892 aa30.34■■■□□ 2.45
CRNDE-205ENST00000558952 MYT1Q01538 1121 aa30.34■■■□□ 2.45
CRNDE-205ENST00000558952 GCP02774 474 aa30.32■■■□□ 2.44
CRNDE-205ENST00000558952 SSH2Q76I76 1423 aa30.31■■■□□ 2.44
CRNDE-205ENST00000558952 ONECUT3O60422 494 aaPredicted RBP30.31■■■□□ 2.44
CRNDE-205ENST00000558952 CPDO75976 1380 aa30.3■■■□□ 2.44
CRNDE-205ENST00000558952 STRN4Q9NRL3 753 aa30.3■■■□□ 2.44
CRNDE-205ENST00000558952 AKAP12Q02952 1782 aa30.3■■■□□ 2.44
CRNDE-205ENST00000558952 KTN1Q86UP2 1357 aaKnown RBP30.29■■■□□ 2.44
CRNDE-205ENST00000558952 SPATA31A5Q5VU36 1347 aa30.29■■■□□ 2.44
CRNDE-205ENST00000558952 TTC21BQ7Z4L5 1316 aa30.29■■■□□ 2.44
CRNDE-205ENST00000558952 SPATA31A7Q8IWB4 1347 aa30.29■■■□□ 2.44
CRNDE-205ENST00000558952 FAM98CQ17RN3 349 aaKnown RBP30.29■■■□□ 2.44
CRNDE-205ENST00000558952 TIMELESSQ9UNS1 1208 aa30.29■■■□□ 2.44
CRNDE-205ENST00000558952 CPSF1Q10570 1443 aaKnown RBP30.29■■■□□ 2.44
CRNDE-205ENST00000558952 SLC24A1O60721 1099 aa30.28■■■□□ 2.44
CRNDE-205ENST00000558952 EVA1CP58658 441 aa30.28■■■□□ 2.44
CRNDE-205ENST00000558952 TMC1Q8TDI8 760 aa30.28■■■□□ 2.44
CRNDE-205ENST00000558952 TTC21AQ8NDW8 1320 aa30.27■■■□□ 2.44
CRNDE-205ENST00000558952 ST20-MTHFSA0A0A6YYL1 179 aa30.27■■■□□ 2.44
CRNDE-205ENST00000558952 PIK3C2AO00443 1686 aa30.27■■■□□ 2.44
CRNDE-205ENST00000558952 KRT27Q7Z3Y8 459 aa30.25■■■□□ 2.43
CRNDE-205ENST00000558952 CCDC125Q86Z20 511 aa30.25■■■□□ 2.43
CRNDE-205ENST00000558952 BRWD3Q6RI45 1802 aa30.24■■■□□ 2.43
CRNDE-205ENST00000558952 SLIT3O75094 1523 aa30.24■■■□□ 2.43
CRNDE-205ENST00000558952 ZBTB7CA1YPR0 619 aa30.24■■■□□ 2.43
CRNDE-205ENST00000558952 HDGFL2Q7Z4V5 671 aaPredicted RBP30.24■■■□□ 2.43
CRNDE-205ENST00000558952 PUS7Q96PZ0 661 aaKnown RBP30.24■■■□□ 2.43
CRNDE-205ENST00000558952 SPATA31A1Q5TZJ5 1347 aa30.22■■■□□ 2.43
CRNDE-205ENST00000558952 TESK2Q96S53 571 aa30.22■■■□□ 2.43
CRNDE-205ENST00000558952 MON2Q7Z3U7 1717 aa30.21■■■□□ 2.43
CRNDE-205ENST00000558952 LMO7Q8WWI1 1683 aa30.2■■■□□ 2.43
CRNDE-205ENST00000558952 CAMTA1Q9Y6Y1 1673 aa30.2■■■□□ 2.43
CRNDE-205ENST00000558952 USP47Q96K76 1375 aa30.2■■■□□ 2.43
CRNDE-205ENST00000558952 KCNH5Q8NCM2 988 aa30.2■■■□□ 2.43
CRNDE-205ENST00000558952 TERF2IPQ9NYB0 399 aa30.2■■■□□ 2.43
CRNDE-205ENST00000558952 SLC12A5Q9H2X9 1139 aa30.19■■■□□ 2.42
CRNDE-205ENST00000558952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.18■■■□□ 2.42
CRNDE-205ENST00000558952 CCER1Q8TC90 406 aaPredicted RBP30.18■■■□□ 2.42
CRNDE-205ENST00000558952 USP35Q9P2H5 1018 aa30.18■■■□□ 2.42
CRNDE-205ENST00000558952 CD163L1Q9NR16 1453 aa30.17■■■□□ 2.42
CRNDE-205ENST00000558952 BLMP54132 1417 aaPredicted RBP30.16■■■□□ 2.42
CRNDE-205ENST00000558952 LARP1Q6PKG0 1096 aaKnown RBP30.16■■■□□ 2.42
CRNDE-205ENST00000558952 AATKQ6ZMQ8 1374 aa30.15■■■□□ 2.42
CRNDE-205ENST00000558952 NINLQ9Y2I6 1382 aa30.15■■■□□ 2.42
CRNDE-205ENST00000558952 SOX12O15370 315 aa30.15■■■□□ 2.42
CRNDE-205ENST00000558952 SF3B2Q13435 895 aaKnown RBP30.15■■■□□ 2.42
CRNDE-205ENST00000558952 THSD7AQ9UPZ6 1657 aa30.14■■■□□ 2.42
CRNDE-205ENST00000558952 TMF1P82094 1093 aa30.14■■■□□ 2.42
CRNDE-205ENST00000558952 COL5A2P05997 1499 aaPredicted RBP30.13■■■□□ 2.41
CRNDE-205ENST00000558952 EDC4Q6P2E9 1401 aaKnown RBP30.13■■■□□ 2.41
CRNDE-205ENST00000558952 A0A1W2PP64 1363 aa30.12■■■□□ 2.41
CRNDE-205ENST00000558952 TCP11L2Q8N4U5 519 aa30.11■■■□□ 2.41
CRNDE-205ENST00000558952 BARGINQ6ZT62 677 aa30.1■■■□□ 2.41
CRNDE-205ENST00000558952 USP31Q70CQ4 1352 aa30.1■■■□□ 2.41
CRNDE-205ENST00000558952 ARHGEF25Q86VW2 580 aa30.09■■■□□ 2.41
CRNDE-205ENST00000558952 NME9Q86XW9 330 aa30.09■■■□□ 2.41
CRNDE-205ENST00000558952 THRAP3Q9Y2W1 955 aaKnown RBP30.09■■■□□ 2.41
CRNDE-205ENST00000558952 EP400Q96L91 3159 aa30.09■■■□□ 2.41
CRNDE-205ENST00000558952 CRB1P82279 1406 aa30.08■■■□□ 2.41
CRNDE-205ENST00000558952 ZRANB1Q9UGI0 708 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms