RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PHRF1Q9P1Y6 1649 aaKnown RBP18■□□□□ 0.47
RABGGTA-207ENST00000558936 EVC2Q86UK5 1308 aa17.99■□□□□ 0.47
RABGGTA-207ENST00000558936 PLEKHG5O94827 1062 aa17.99■□□□□ 0.47
RABGGTA-207ENST00000558936 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-207ENST00000558936 USP47Q96K76 1375 aa17.99■□□□□ 0.47
RABGGTA-207ENST00000558936 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
RABGGTA-207ENST00000558936 SLIT2O94813 1529 aa17.98■□□□□ 0.47
RABGGTA-207ENST00000558936 SOCS7O14512 581 aa17.98■□□□□ 0.47
RABGGTA-207ENST00000558936 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
RABGGTA-207ENST00000558936 USP6P35125 1406 aa17.98■□□□□ 0.47
RABGGTA-207ENST00000558936 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
RABGGTA-207ENST00000558936 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
RABGGTA-207ENST00000558936 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
RABGGTA-207ENST00000558936 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
RABGGTA-207ENST00000558936 ARHGEF10O15013 1369 aa17.95■□□□□ 0.46
RABGGTA-207ENST00000558936 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
RABGGTA-207ENST00000558936 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
RABGGTA-207ENST00000558936 ATRNO75882 1429 aa17.94■□□□□ 0.46
RABGGTA-207ENST00000558936 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-207ENST00000558936 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-207ENST00000558936 NGLY1Q96IV0 654 aa17.93■□□□□ 0.46
RABGGTA-207ENST00000558936 GLI3P10071 1580 aa17.92■□□□□ 0.46
RABGGTA-207ENST00000558936 ZNF772Q68DY9 489 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-207ENST00000558936 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
RABGGTA-207ENST00000558936 MYOM1P52179 1685 aa17.92■□□□□ 0.46
RABGGTA-207ENST00000558936 USP19O94966 1318 aa17.92■□□□□ 0.46
RABGGTA-207ENST00000558936 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-207ENST00000558936 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
RABGGTA-207ENST00000558936 NWD2Q9ULI1 1742 aa17.9■□□□□ 0.46
RABGGTA-207ENST00000558936 USP21Q9UK80 565 aa17.9■□□□□ 0.46
RABGGTA-207ENST00000558936 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
RABGGTA-207ENST00000558936 COL18A1P39060 1754 aa17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 SLIT3O75094 1523 aa17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 LMO7Q8WWI1 1683 aa17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 A0A1W2PP64 1363 aa17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 RGS12O14924 1447 aa17.89■□□□□ 0.45
RABGGTA-207ENST00000558936 USP54Q70EL1 1684 aa17.88■□□□□ 0.45
RABGGTA-207ENST00000558936 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-207ENST00000558936 COL14A1Q05707 1796 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-207ENST00000558936 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
RABGGTA-207ENST00000558936 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
RABGGTA-207ENST00000558936 CAMTA1Q9Y6Y1 1673 aa17.86■□□□□ 0.45
RABGGTA-207ENST00000558936 HSPA5P11021 654 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-207ENST00000558936 CHRNA2Q15822 529 aa17.85■□□□□ 0.45
RABGGTA-207ENST00000558936 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
RABGGTA-207ENST00000558936 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 RXRBP28702 533 aa17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 ZC3H6P61129 1189 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-207ENST00000558936 NFAT5O94916 1531 aa17.83■□□□□ 0.45
RABGGTA-207ENST00000558936 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.45
RABGGTA-207ENST00000558936 GCP02774 474 aa17.83■□□□□ 0.44
RABGGTA-207ENST00000558936 RBM6P78332 1123 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-207ENST00000558936 NME9Q86XW9 330 aa17.83■□□□□ 0.44
RABGGTA-207ENST00000558936 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-207ENST00000558936 EP400Q96L91 3159 aa17.83■□□□□ 0.44
RABGGTA-207ENST00000558936 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
RABGGTA-207ENST00000558936 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
RABGGTA-207ENST00000558936 TRPC5Q9UL62 973 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-207ENST00000558936 CPDO75976 1380 aa17.81■□□□□ 0.44
RABGGTA-207ENST00000558936 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
RABGGTA-207ENST00000558936 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-207ENST00000558936 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
RABGGTA-207ENST00000558936 NLRP6P59044 892 aa17.8■□□□□ 0.44
RABGGTA-207ENST00000558936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
RABGGTA-207ENST00000558936 FBLN1P23142 703 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 TMF1P82094 1093 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 VPS72Q15906 364 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 NLRP13Q86W25 1043 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 OVOS2A0A0J9YW53 1432 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 OVOS2Q6IE36 1432 aa17.79■□□□□ 0.44
RABGGTA-207ENST00000558936 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
RABGGTA-207ENST00000558936 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-207ENST00000558936 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-207ENST00000558936 ONECUT3O60422 494 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-207ENST00000558936 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.43
RABGGTA-207ENST00000558936 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
RABGGTA-207ENST00000558936 PRDM11Q9NQV5 511 aa17.76■□□□□ 0.43
RABGGTA-207ENST00000558936 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
RABGGTA-207ENST00000558936 LTN1O94822 1766 aa17.75■□□□□ 0.43
RABGGTA-207ENST00000558936 SPATA31A5Q5VU36 1347 aa17.74■□□□□ 0.43
RABGGTA-207ENST00000558936 SPATA31A7Q8IWB4 1347 aa17.74■□□□□ 0.43
RABGGTA-207ENST00000558936 THSD7AQ9UPZ6 1657 aa17.74■□□□□ 0.43
RABGGTA-207ENST00000558936 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
RABGGTA-207ENST00000558936 COL5A2P05997 1499 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-207ENST00000558936 FYB1O15117 783 aa17.73■□□□□ 0.43
RABGGTA-207ENST00000558936 LARP1Q6PKG0 1096 aaKnown RBP17.73■□□□□ 0.43
RABGGTA-207ENST00000558936 AATKQ6ZMQ8 1374 aa17.72■□□□□ 0.43
RABGGTA-207ENST00000558936 UPF1Q92900 1129 aaKnown RBP eCLIP17.72■□□□□ 0.43
RABGGTA-207ENST00000558936 SOX12O15370 315 aa17.71■□□□□ 0.43
RABGGTA-207ENST00000558936 HDGFL2Q7Z4V5 671 aaPredicted RBP17.71■□□□□ 0.43
RABGGTA-207ENST00000558936 TERF2IPQ9NYB0 399 aa17.71■□□□□ 0.43
RABGGTA-207ENST00000558936 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
RABGGTA-207ENST00000558936 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
RABGGTA-207ENST00000558936 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
RABGGTA-207ENST00000558936 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms