RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
IDH3A-207ENST00000558554 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
IDH3A-207ENST00000558554 RXRBP28702 533 aa17.75■□□□□ 0.43
IDH3A-207ENST00000558554 POLR3AO14802 1390 aaPredicted RBP17.74■□□□□ 0.43
IDH3A-207ENST00000558554 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
IDH3A-207ENST00000558554 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.73■□□□□ 0.43
IDH3A-207ENST00000558554 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
IDH3A-207ENST00000558554 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
IDH3A-207ENST00000558554 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
IDH3A-207ENST00000558554 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 USP47Q96K76 1375 aa17.72■□□□□ 0.43
IDH3A-207ENST00000558554 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
IDH3A-207ENST00000558554 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
IDH3A-207ENST00000558554 NRAPQ86VF7 1730 aa17.7■□□□□ 0.42
IDH3A-207ENST00000558554 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
IDH3A-207ENST00000558554 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
IDH3A-207ENST00000558554 TRPC5Q9UL62 973 aaPredicted RBP17.69■□□□□ 0.42
IDH3A-207ENST00000558554 USP6P35125 1406 aa17.69■□□□□ 0.42
IDH3A-207ENST00000558554 RGS12O14924 1447 aa17.68■□□□□ 0.42
IDH3A-207ENST00000558554 SOX12O15370 315 aa17.68■□□□□ 0.42
IDH3A-207ENST00000558554 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
IDH3A-207ENST00000558554 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
IDH3A-207ENST00000558554 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
IDH3A-207ENST00000558554 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
IDH3A-207ENST00000558554 CHRNA2Q15822 529 aa17.67■□□□□ 0.42
IDH3A-207ENST00000558554 FNBP4Q8N3X1 1017 aaPredicted RBP17.67■□□□□ 0.42
IDH3A-207ENST00000558554 PRDM11Q9NQV5 511 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
IDH3A-207ENST00000558554 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 BRWD3Q6RI45 1802 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 ATRNO75882 1429 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 SLIT2O94813 1529 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
IDH3A-207ENST00000558554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
IDH3A-207ENST00000558554 RGPD5Q99666 1765 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 A0A0G2JS52 829 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 MYT1Q01538 1121 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 UNC5CLQ8IV45 518 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 BTG4Q9NY30 223 aa17.65■□□□□ 0.42
IDH3A-207ENST00000558554 GLI3P10071 1580 aa17.64■□□□□ 0.41
IDH3A-207ENST00000558554 NLRP6P59044 892 aa17.64■□□□□ 0.41
IDH3A-207ENST00000558554 SLC12A5Q9H2X9 1139 aa17.63■□□□□ 0.41
IDH3A-207ENST00000558554 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
IDH3A-207ENST00000558554 TESK2Q96S53 571 aa17.62■□□□□ 0.41
IDH3A-207ENST00000558554 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
IDH3A-207ENST00000558554 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
IDH3A-207ENST00000558554 LTN1O94822 1766 aa17.61■□□□□ 0.41
IDH3A-207ENST00000558554 TMF1P82094 1093 aa17.61■□□□□ 0.41
IDH3A-207ENST00000558554 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
IDH3A-207ENST00000558554 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
IDH3A-207ENST00000558554 TTC21BQ7Z4L5 1316 aa17.6■□□□□ 0.41
IDH3A-207ENST00000558554 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
IDH3A-207ENST00000558554 MYOM1P52179 1685 aa17.6■□□□□ 0.41
IDH3A-207ENST00000558554 CD163L1Q9NR16 1453 aa17.59■□□□□ 0.41
IDH3A-207ENST00000558554 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
IDH3A-207ENST00000558554 A0A1W2PP64 1363 aa17.59■□□□□ 0.41
IDH3A-207ENST00000558554 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
IDH3A-207ENST00000558554 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.41
IDH3A-207ENST00000558554 KIF20BQ96Q89 1820 aa17.58■□□□□ 0.4
IDH3A-207ENST00000558554 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
IDH3A-207ENST00000558554 GCP02774 474 aa17.57■□□□□ 0.4
IDH3A-207ENST00000558554 EVA1CP58658 441 aa17.57■□□□□ 0.4
IDH3A-207ENST00000558554 NME9Q86XW9 330 aa17.57■□□□□ 0.4
IDH3A-207ENST00000558554 SLIT3O75094 1523 aa17.56■□□□□ 0.4
IDH3A-207ENST00000558554 LMO7Q8WWI1 1683 aa17.56■□□□□ 0.4
IDH3A-207ENST00000558554 TERF2IPQ9NYB0 399 aa17.56■□□□□ 0.4
IDH3A-207ENST00000558554 USP19O94966 1318 aa17.56■□□□□ 0.4
IDH3A-207ENST00000558554 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
IDH3A-207ENST00000558554 VPS72Q15906 364 aa17.55■□□□□ 0.4
IDH3A-207ENST00000558554 FAM98CQ17RN3 349 aaKnown RBP17.55■□□□□ 0.4
IDH3A-207ENST00000558554 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
IDH3A-207ENST00000558554 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
IDH3A-207ENST00000558554 EP400Q96L91 3159 aa17.54■□□□□ 0.4
IDH3A-207ENST00000558554 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
IDH3A-207ENST00000558554 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
IDH3A-207ENST00000558554 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
IDH3A-207ENST00000558554 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
IDH3A-207ENST00000558554 USP54Q70EL1 1684 aa17.52■□□□□ 0.4
IDH3A-207ENST00000558554 COL18A1P39060 1754 aa17.51■□□□□ 0.39
IDH3A-207ENST00000558554 SEPT12Q8IYM1 358 aa17.51■□□□□ 0.39
IDH3A-207ENST00000558554 NINLQ9Y2I6 1382 aa17.51■□□□□ 0.39
IDH3A-207ENST00000558554 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
IDH3A-207ENST00000558554 NFAT5O94916 1531 aa17.5■□□□□ 0.39
IDH3A-207ENST00000558554 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
IDH3A-207ENST00000558554 LARP1Q6PKG0 1096 aaKnown RBP17.49■□□□□ 0.39
IDH3A-207ENST00000558554 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
IDH3A-207ENST00000558554 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
IDH3A-207ENST00000558554 CPDO75976 1380 aa17.49■□□□□ 0.39
IDH3A-207ENST00000558554 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
IDH3A-207ENST00000558554 SPATA31A5Q5VU36 1347 aa17.48■□□□□ 0.39
IDH3A-207ENST00000558554 SPATA31A7Q8IWB4 1347 aa17.48■□□□□ 0.39
IDH3A-207ENST00000558554 COL5A2P05997 1499 aaPredicted RBP17.48■□□□□ 0.39
IDH3A-207ENST00000558554 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
IDH3A-207ENST00000558554 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms