RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
APEX1-216ENST00000557159 SEC24BO95487 1268 aa15.97■□□□□ 0.15
APEX1-216ENST00000557159 BCAR3O75815 825 aa15.96■□□□□ 0.15
APEX1-216ENST00000557159 MCM4P33991 863 aa15.96■□□□□ 0.15
APEX1-216ENST00000557159 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
APEX1-216ENST00000557159 PPLO60437 1756 aa15.96■□□□□ 0.15
APEX1-216ENST00000557159 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
APEX1-216ENST00000557159 CENPJQ9HC77 1338 aaPredicted RBP15.96■□□□□ 0.15
APEX1-216ENST00000557159 MRE11P49959 708 aa15.96■□□□□ 0.14
APEX1-216ENST00000557159 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.14
APEX1-216ENST00000557159 TBC1D2Q9BYX2 928 aa15.96■□□□□ 0.14
APEX1-216ENST00000557159 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.14
APEX1-216ENST00000557159 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
APEX1-216ENST00000557159 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
APEX1-216ENST00000557159 C14orf93Q9H972 538 aaKnown RBP15.94■□□□□ 0.14
APEX1-216ENST00000557159 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
APEX1-216ENST00000557159 SLKQ9H2G2 1235 aaPredicted RBP15.94■□□□□ 0.14
APEX1-216ENST00000557159 CHMP5Q9NZZ3 219 aa15.94■□□□□ 0.14
APEX1-216ENST00000557159 MED14O60244 1454 aa15.93■□□□□ 0.14
APEX1-216ENST00000557159 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
APEX1-216ENST00000557159 APAF1O14727 1248 aa15.93■□□□□ 0.14
APEX1-216ENST00000557159 STRCQ7RTU9 1775 aa15.91■□□□□ 0.14
APEX1-216ENST00000557159 DDX11L8A8MPP1 907 aa15.91■□□□□ 0.14
APEX1-216ENST00000557159 NCOA3Q9Y6Q9 1424 aa15.9■□□□□ 0.14
APEX1-216ENST00000557159 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
APEX1-216ENST00000557159 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
APEX1-216ENST00000557159 PKNOX2Q96KN3 472 aa15.89■□□□□ 0.13
APEX1-216ENST00000557159 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
APEX1-216ENST00000557159 HSP90AA1P07900 732 aaKnown RBP15.89■□□□□ 0.13
APEX1-216ENST00000557159 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
APEX1-216ENST00000557159 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
APEX1-216ENST00000557159 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
APEX1-216ENST00000557159 IQSEC2Q5JU85 1478 aa15.88■□□□□ 0.13
APEX1-216ENST00000557159 PTMSP20962 102 aa15.88■□□□□ 0.13
APEX1-216ENST00000557159 ADAMTS13Q76LX8 1427 aa15.88■□□□□ 0.13
APEX1-216ENST00000557159 SHPRHQ149N8 1683 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 TRAK2O60296 914 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
APEX1-216ENST00000557159 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
APEX1-216ENST00000557159 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 TBX22Q9Y458 520 aa15.87■□□□□ 0.13
APEX1-216ENST00000557159 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
APEX1-216ENST00000557159 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
APEX1-216ENST00000557159 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
APEX1-216ENST00000557159 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
APEX1-216ENST00000557159 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
APEX1-216ENST00000557159 ADGRB1O14514 1584 aa15.85■□□□□ 0.13
APEX1-216ENST00000557159 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
APEX1-216ENST00000557159 PANK1Q8TE04 598 aa15.85■□□□□ 0.13
APEX1-216ENST00000557159 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
APEX1-216ENST00000557159 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
APEX1-216ENST00000557159 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
APEX1-216ENST00000557159 DDIT3P35638 169 aa15.84■□□□□ 0.13
APEX1-216ENST00000557159 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
APEX1-216ENST00000557159 GRPEL1Q9HAV7 217 aa15.84■□□□□ 0.13
APEX1-216ENST00000557159 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
APEX1-216ENST00000557159 PCDHB15Q9Y5E8 787 aa15.84■□□□□ 0.13
APEX1-216ENST00000557159 USP32Q8NFA0 1604 aa15.84■□□□□ 0.13
APEX1-216ENST00000557159 ESPNB1AK53 854 aa15.83■□□□□ 0.12
APEX1-216ENST00000557159 TPM2P07951 284 aa15.83■□□□□ 0.12
APEX1-216ENST00000557159 SNX21Q969T3 373 aa15.83■□□□□ 0.12
APEX1-216ENST00000557159 C22orf23Q9BZE7 217 aa15.82■□□□□ 0.12
APEX1-216ENST00000557159 METP08581 1390 aa15.82■□□□□ 0.12
APEX1-216ENST00000557159 SKOR2Q2VWA4 1001 aaPredicted RBP15.82■□□□□ 0.12
APEX1-216ENST00000557159 PANK2Q9BZ23 570 aa15.82■□□□□ 0.12
APEX1-216ENST00000557159 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
APEX1-216ENST00000557159 HDAC1Q13547 482 aaPredicted RBP15.8■□□□□ 0.12
APEX1-216ENST00000557159 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
APEX1-216ENST00000557159 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
APEX1-216ENST00000557159 TRAK1Q9UPV9 953 aa15.8■□□□□ 0.12
APEX1-216ENST00000557159 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
APEX1-216ENST00000557159 PIK3R4Q99570 1358 aa15.8■□□□□ 0.12
APEX1-216ENST00000557159 QRICH2Q9H0J4 1663 aa15.8■□□□□ 0.12
APEX1-216ENST00000557159 RBM25P49756 843 aaKnown RBP15.79■□□□□ 0.12
APEX1-216ENST00000557159 TERF1P54274 439 aa15.79■□□□□ 0.12
APEX1-216ENST00000557159 EVC2Q86UK5 1308 aa15.78■□□□□ 0.12
APEX1-216ENST00000557159 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
APEX1-216ENST00000557159 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
APEX1-216ENST00000557159 SMC5Q8IY18 1101 aa15.78■□□□□ 0.12
APEX1-216ENST00000557159 IBTKQ9P2D0 1353 aaPredicted RBP15.78■□□□□ 0.12
APEX1-216ENST00000557159 ZMYND15Q9H091 742 aa15.78■□□□□ 0.12
APEX1-216ENST00000557159 RLBP1P12271 317 aa15.77■□□□□ 0.11
APEX1-216ENST00000557159 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
APEX1-216ENST00000557159 PTPRUQ92729 1446 aa15.76■□□□□ 0.11
APEX1-216ENST00000557159 GBP4Q96PP9 640 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 AMOTL2Q9Y2J4 779 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 KCNA6P17658 529 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 CLEC17AQ6ZS10 378 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 PDCL3Q9H2J4 239 aa15.75■□□□□ 0.11
APEX1-216ENST00000557159 YTHDC2Q9H6S0 1430 aaKnown RBP15.75■□□□□ 0.11
APEX1-216ENST00000557159 ARHGEF28Q8N1W1 1705 aaKnown RBP15.74■□□□□ 0.11
APEX1-216ENST00000557159 ABCC11Q96J66 1382 aa15.74■□□□□ 0.11
APEX1-216ENST00000557159 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
APEX1-216ENST00000557159 TRIM44Q96DX7 344 aaPredicted RBP15.74■□□□□ 0.11
APEX1-216ENST00000557159 PPP1R9BQ96SB3 815 aa15.74■□□□□ 0.11
APEX1-216ENST00000557159 ZKSCAN2Q63HK3 967 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms