RNA–Protein interactions for RNA: ENST00000557135.5

WARS-238, Transcript of tryptophanyl-tRNA synthetase, human

APPRIS P1 TSL 1 (best) BASIC

Gene WARS, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WARS-238	ENST00000557135	APAF1	O14727	1248 aa		13.16	□□□□□ -0.3
WARS-238	ENST00000557135	ZNF692	Q9BU19	519 aa	Predicted RBP	13.16	□□□□□ -0.3
WARS-238	ENST00000557135	PDE3B	Q13370	1112 aa		13.16	□□□□□ -0.3
WARS-238	ENST00000557135	PMFBP1	Q8TBY8	1022 aa		13.16	□□□□□ -0.3
WARS-238	ENST00000557135	COL3A1	P02461	1466 aa	Predicted RBP	13.15	□□□□□ -0.3
WARS-238	ENST00000557135	RGPD8	O14715	1765 aa	Predicted RBP	13.14	□□□□□ -0.31
WARS-238	ENST00000557135	TTC21B	Q7Z4L5	1316 aa		13.14	□□□□□ -0.31
WARS-238	ENST00000557135	NRK	Q7Z2Y5	1582 aa		13.14	□□□□□ -0.31
WARS-238	ENST00000557135	NALCN	Q8IZF0	1738 aa		13.13	□□□□□ -0.31
WARS-238	ENST00000557135	USP6	P35125	1406 aa		13.13	□□□□□ -0.31
WARS-238	ENST00000557135	ZNF521	Q96K83	1311 aa		13.13	□□□□□ -0.31
WARS-238	ENST00000557135	POLK	Q9UBT6	870 aa		13.13	□□□□□ -0.31
WARS-238	ENST00000557135	FMN2	Q9NZ56	1722 aa		13.13	□□□□□ -0.31
WARS-238	ENST00000557135	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.12	□□□□□ -0.31
WARS-238	ENST00000557135	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.12	□□□□□ -0.31	2e-6	■■■□□ 16.1
WARS-238	ENST00000557135	COG3	Q96JB2	828 aa		13.12	□□□□□ -0.31
WARS-238	ENST00000557135	KDM4F	A0A1W2PPD8	638 aa		13.12	□□□□□ -0.31
WARS-238	ENST00000557135	PPM1G	O15355	546 aa	Predicted RBP	13.12	□□□□□ -0.31
WARS-238	ENST00000557135	ANKAR	Q7Z5J8	1434 aa		13.12	□□□□□ -0.31
WARS-238	ENST00000557135	U2SURP	O15042	1029 aa	Known RBP	13.11	□□□□□ -0.31
WARS-238	ENST00000557135	NGDN	Q8NEJ9	315 aa	Known RBP	13.11	□□□□□ -0.31
WARS-238	ENST00000557135	RUNDC1	Q96C34	613 aa		13.11	□□□□□ -0.31
WARS-238	ENST00000557135	PNPLA6	Q8IY17	1366 aa		13.11	□□□□□ -0.31
WARS-238	ENST00000557135	SSH2	Q76I76	1423 aa		13.11	□□□□□ -0.31
WARS-238	ENST00000557135	HSPA2	P54652	639 aa		13.11	□□□□□ -0.31
WARS-238	ENST00000557135	EMILIN1	Q9Y6C2	1016 aa		13.11	□□□□□ -0.31
WARS-238	ENST00000557135	RRP7A	Q9Y3A4	280 aa	Known RBP	13.1	□□□□□ -0.31
WARS-238	ENST00000557135	ADGRL3	Q9HAR2	1447 aa		13.1	□□□□□ -0.31
WARS-238	ENST00000557135	IQSEC2	Q5JU85	1478 aa		13.09	□□□□□ -0.31
WARS-238	ENST00000557135	NWD1	Q149M9	1564 aa		13.09	□□□□□ -0.31
WARS-238	ENST00000557135	MAP2	P11137	1827 aa	Known RBP	13.09	□□□□□ -0.31
WARS-238	ENST00000557135	DIAPH1	O60610	1272 aa	Known RBP	13.09	□□□□□ -0.31
WARS-238	ENST00000557135	GOLGA2	Q08379	1002 aa		13.09	□□□□□ -0.31
WARS-238	ENST00000557135	RRS1	Q15050	365 aa	Known RBP	13.09	□□□□□ -0.31
WARS-238	ENST00000557135	AATK	Q6ZMQ8	1374 aa		13.09	□□□□□ -0.31
WARS-238	ENST00000557135	RNF123	Q5XPI4	1314 aa		13.08	□□□□□ -0.31
WARS-238	ENST00000557135	NEUROD2	Q15784	382 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	C14orf37	Q86TY3	774 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	TCP11L2	Q8N4U5	519 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	DMRT2	Q9Y5R5	561 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	OVOS2	A0A0J9YW53	1432 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	OVOS2	Q6IE36	1432 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.08	□□□□□ -0.32
WARS-238	ENST00000557135	RCAN3	Q9UKA8	241 aa		13.08	□□□□□ -0.32
WARS-238	ENST00000557135	DUSP27	Q5VZP5	1158 aa		13.07	□□□□□ -0.32
WARS-238	ENST00000557135	SLFN5	Q08AF3	891 aa		13.06	□□□□□ -0.32
WARS-238	ENST00000557135	TTC21A	Q8NDW8	1320 aa		13.06	□□□□□ -0.32
WARS-238	ENST00000557135	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.06	□□□□□ -0.32
WARS-238	ENST00000557135	PROSER2	Q86WR7	435 aa	Predicted RBP	13.06	□□□□□ -0.32
WARS-238	ENST00000557135	PHF8	Q9UPP1	1060 aa		13.06	□□□□□ -0.32
WARS-238	ENST00000557135	SOX12	O15370	315 aa		13.05	□□□□□ -0.32
WARS-238	ENST00000557135	WWC1	Q8IX03	1113 aa		13.05	□□□□□ -0.32
WARS-238	ENST00000557135	NGEF	Q8N5V2	710 aa		13.05	□□□□□ -0.32
WARS-238	ENST00000557135	PLEKHF1	Q96S99	279 aa		13.05	□□□□□ -0.32
WARS-238	ENST00000557135	USP31	Q70CQ4	1352 aa		13.04	□□□□□ -0.32
WARS-238	ENST00000557135	PIK3C2A	O00443	1686 aa		13.04	□□□□□ -0.32
WARS-238	ENST00000557135	IL13	P35225	146 aa		13.03	□□□□□ -0.32
WARS-238	ENST00000557135	RRP1	P56182	461 aa	Known RBP	13.03	□□□□□ -0.32
WARS-238	ENST00000557135	ESCO1	Q5FWF5	840 aa		13.03	□□□□□ -0.32
WARS-238	ENST00000557135	TRMT2A	Q8IZ69	625 aa	Known RBP	13.03	□□□□□ -0.32
WARS-238	ENST00000557135	LMTK3	Q96Q04	1460 aa		13.03	□□□□□ -0.32
WARS-238	ENST00000557135	NUTM2G	Q5VZR2	741 aa		13.03	□□□□□ -0.32
WARS-238	ENST00000557135	PHF23	Q9BUL5	403 aa	Predicted RBP	13.03	□□□□□ -0.32
WARS-238	ENST00000557135	STRCP1	A6NGW2	1772 aa		13.02	□□□□□ -0.33
WARS-238	ENST00000557135		E9PSI1	815 aa		13.02	□□□□□ -0.33
WARS-238	ENST00000557135	PAK3	O75914	559 aa	Predicted RBP	13.02	□□□□□ -0.33
WARS-238	ENST00000557135	HMOX1	P09601	288 aa		13.02	□□□□□ -0.33
WARS-238	ENST00000557135	LRRC7	Q96NW7	1537 aa		13.02	□□□□□ -0.33
WARS-238	ENST00000557135	ERICH6B	Q5W0A0	696 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	ORAI2	Q96SN7	254 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	RSPH6A	Q9H0K4	717 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	MAPK8IP3	Q9UPT6	1336 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	PEAK1	Q9H792	1746 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	NLRP6	P59044	892 aa		13.01	□□□□□ -0.33
WARS-238	ENST00000557135	PRKAR2B	P31323	418 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	TMPO	P42166	694 aa	Known RBP	13	□□□□□ -0.33
WARS-238	ENST00000557135	CCDC27	Q2M243	656 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	TMEM94	Q12767	1356 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	MAP3K19	Q56UN5	1328 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	FCHSD2	O94868	740 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	ABTB2	Q8N961	1025 aa		13	□□□□□ -0.33
WARS-238	ENST00000557135	EIF4A2	Q14240	407 aa	Known RBP	12.99	□□□□□ -0.33
WARS-238	ENST00000557135	HSP90AB2P	Q58FF8	381 aa		12.99	□□□□□ -0.33
WARS-238	ENST00000557135	PPP4R2	Q9NY27	417 aa		12.99	□□□□□ -0.33
WARS-238	ENST00000557135	MARF1	Q9Y4F3	1742 aa	Known RBP	12.98	□□□□□ -0.33
WARS-238	ENST00000557135	PLIN1	O60240	522 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	PSME1	Q06323	249 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	WDR63	Q8IWG1	891 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	PNN	Q9H307	717 aa	Known RBP	12.98	□□□□□ -0.33
WARS-238	ENST00000557135	C19orf44	Q9H6X5	657 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	TRIM35	Q9UPQ4	493 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	XPC	Q01831	940 aa	Predicted RBP	12.98	□□□□□ -0.33
WARS-238	ENST00000557135	NCBP3	Q53F19	620 aa	Known RBP	12.98	□□□□□ -0.33
WARS-238	ENST00000557135	PHACTR3	Q96KR7	559 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	STRC	Q7RTU9	1775 aa		12.98	□□□□□ -0.33
WARS-238	ENST00000557135	FOXO3	O43524	673 aa		12.97	□□□□□ -0.33
WARS-238	ENST00000557135	C1orf167	Q5SNV9	1468 aa		12.97	□□□□□ -0.33
WARS-238	ENST00000557135	RIPK4	P57078	832 aa		12.97	□□□□□ -0.33
WARS-238	ENST00000557135	B4GALNT3	Q6L9W6	998 aa		12.96	□□□□□ -0.33
WARS-238	ENST00000557135	SBNO1	A3KN83	1393 aa		12.96	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms