RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 BMP1P13497 986 aa7.91□□□□□ -1.14
FOXN3-213ENST00000556916 HRCP23327 699 aa7.91□□□□□ -1.14
FOXN3-213ENST00000556916 CTHP32929 405 aa7.91□□□□□ -1.14
FOXN3-213ENST00000556916 PDE4DQ08499 809 aa7.91□□□□□ -1.14
FOXN3-213ENST00000556916 WFS1O76024 890 aa7.9□□□□□ -1.14
FOXN3-213ENST00000556916 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
FOXN3-213ENST00000556916 RIC3Q7Z5B4 369 aa7.9□□□□□ -1.14
FOXN3-213ENST00000556916 MAP10Q9P2G4 905 aa7.9□□□□□ -1.14
FOXN3-213ENST00000556916 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
FOXN3-213ENST00000556916 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
FOXN3-213ENST00000556916 SLC24A3Q9HC58 644 aa7.89□□□□□ -1.15
FOXN3-213ENST00000556916 CAPN5O15484 640 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-213ENST00000556916 F12P00748 615 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-213ENST00000556916 PRPF38BQ5VTL8 546 aaKnown RBP7.88□□□□□ -1.15
FOXN3-213ENST00000556916 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
FOXN3-213ENST00000556916 TRIM46Q7Z4K8 759 aa7.88□□□□□ -1.15
FOXN3-213ENST00000556916 TSC1Q92574 1164 aa7.88□□□□□ -1.15
FOXN3-213ENST00000556916 LIMD1Q9UGP4 676 aa7.88□□□□□ -1.15
FOXN3-213ENST00000556916 VARSP26640 1264 aaKnown RBP7.87□□□□□ -1.15
FOXN3-213ENST00000556916 PER1O15534 1290 aaPredicted RBP7.86□□□□□ -1.15
FOXN3-213ENST00000556916 NNTQ13423 1086 aa7.86□□□□□ -1.15
FOXN3-213ENST00000556916 QPCTQ16769 361 aa7.86□□□□□ -1.15
FOXN3-213ENST00000556916 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
FOXN3-213ENST00000556916 PLEKHG3A1L390 1219 aa7.84□□□□□ -1.15
FOXN3-213ENST00000556916 NUTM2BA6NNL0 878 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-213ENST00000556916 NUTM2EB1AL46 878 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-213ENST00000556916 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
FOXN3-213ENST00000556916 NUTM2DQ5VT03 806 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-213ENST00000556916 NUTM2AQ8IVF1 878 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-213ENST00000556916 FAM174AQ8TBP5 190 aa7.84□□□□□ -1.15
FOXN3-213ENST00000556916 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
FOXN3-213ENST00000556916 ADH1CP00326 375 aa7.83□□□□□ -1.16
FOXN3-213ENST00000556916 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
FOXN3-213ENST00000556916 ARID5BQ14865 1188 aa7.82□□□□□ -1.16
FOXN3-213ENST00000556916 TUSC1Q2TAM9 212 aa7.82□□□□□ -1.16
FOXN3-213ENST00000556916 MPNDQ8N594 471 aa7.82□□□□□ -1.16
FOXN3-213ENST00000556916 LILRB3O75022 631 aa7.81□□□□□ -1.16
FOXN3-213ENST00000556916 TIMP2P16035 220 aa7.81□□□□□ -1.16
FOXN3-213ENST00000556916 WDR4P57081 412 aaKnown RBP7.81□□□□□ -1.16
FOXN3-213ENST00000556916 AGERQ15109 404 aa7.81□□□□□ -1.16
FOXN3-213ENST00000556916 C4orf48Q5BLP8 95 aa7.81□□□□□ -1.16
FOXN3-213ENST00000556916 HELBQ8NG08 1087 aaPredicted RBP7.81□□□□□ -1.16
FOXN3-213ENST00000556916 WIPF1O43516 503 aa7.8□□□□□ -1.16
FOXN3-213ENST00000556916 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
FOXN3-213ENST00000556916 RTL5Q5HYW3 569 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-213ENST00000556916 BPHLQ86WA6 291 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-213ENST00000556916 MRPL14Q6P1L8 145 aaKnown RBP7.78□□□□□ -1.16
FOXN3-213ENST00000556916 CDK15Q96Q40 435 aa7.78□□□□□ -1.16
FOXN3-213ENST00000556916 POLR3EQ9NVU0 708 aa7.78□□□□□ -1.16
FOXN3-213ENST00000556916 NR3C2P08235 984 aa7.77□□□□□ -1.17
FOXN3-213ENST00000556916 NBPF14Q5TI25 921 aa7.77□□□□□ -1.17
FOXN3-213ENST00000556916 PURBQ96QR8 312 aaKnown RBP7.77□□□□□ -1.17
FOXN3-213ENST00000556916 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
FOXN3-213ENST00000556916 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
FOXN3-213ENST00000556916 ZIC2O95409 532 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-213ENST00000556916 VEGFBP49765 207 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-213ENST00000556916 SCARF1Q14162 830 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 ARMC2Q8NEN0 867 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 ITPKCQ96DU7 683 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 C1QTNF2Q9BXJ5 285 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-213ENST00000556916 RSPH6AQ9H0K4 717 aa7.76□□□□□ -1.17
FOXN3-213ENST00000556916 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
FOXN3-213ENST00000556916 FSHRP23945 695 aa7.75□□□□□ -1.17
FOXN3-213ENST00000556916 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
FOXN3-213ENST00000556916 SLC16A10Q8TF71 515 aa7.75□□□□□ -1.17
FOXN3-213ENST00000556916 NR5A1Q13285 461 aa7.74□□□□□ -1.17
FOXN3-213ENST00000556916 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
FOXN3-213ENST00000556916 CARD14Q9BXL6 1004 aa7.74□□□□□ -1.17
FOXN3-213ENST00000556916 GPBP1L1Q9HC44 474 aaPredicted RBP7.74□□□□□ -1.17
FOXN3-213ENST00000556916 SOBPA7XYQ1 873 aa7.73□□□□□ -1.17
FOXN3-213ENST00000556916 PRKCSHP14314 528 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-213ENST00000556916 GRM5P41594 1212 aa7.73□□□□□ -1.17
FOXN3-213ENST00000556916 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
FOXN3-213ENST00000556916 H3BM21 787 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 CTDSPL2Q05D32 466 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 NPAS3Q8IXF0 933 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
FOXN3-213ENST00000556916 VASH1Q7L8A9 365 aaPredicted RBP7.71□□□□□ -1.18
FOXN3-213ENST00000556916 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
FOXN3-213ENST00000556916 MEIOBQ8N635 442 aa7.71□□□□□ -1.18
FOXN3-213ENST00000556916 IRF7Q92985 503 aa7.71□□□□□ -1.18
FOXN3-213ENST00000556916 KDM4CQ9H3R0 1056 aa7.71□□□□□ -1.18
FOXN3-213ENST00000556916 GMPRP36959 345 aa7.7□□□□□ -1.18
FOXN3-213ENST00000556916 SH3D19Q5HYK7 790 aa7.7□□□□□ -1.18
FOXN3-213ENST00000556916 FBXO31Q5XUX0 539 aaPredicted RBP7.7□□□□□ -1.18
FOXN3-213ENST00000556916 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
FOXN3-213ENST00000556916 LRRN4Q8WUT4 740 aa7.7□□□□□ -1.18
FOXN3-213ENST00000556916 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
FOXN3-213ENST00000556916 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
FOXN3-213ENST00000556916 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
FOXN3-213ENST00000556916 ERFEQ4G0M1 354 aa7.69□□□□□ -1.18
FOXN3-213ENST00000556916 MAN1A2O60476 641 aa7.68□□□□□ -1.18
FOXN3-213ENST00000556916 BMP2P12643 396 aa7.68□□□□□ -1.18
FOXN3-213ENST00000556916 SKIV2LQ15477 1246 aaKnown RBP7.68□□□□□ -1.18
FOXN3-213ENST00000556916 CCDC116Q8IYX3 515 aa7.68□□□□□ -1.18
FOXN3-213ENST00000556916 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms