RNA–Protein interactions for RNA: ENST00000556562.1

RNF34-209, Transcript of ring finger protein 34, humanhuman

TSL 2

Gene RNF34, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34-209ENST00000556562 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
RNF34-209ENST00000556562 ZRANB1Q9UGI0 708 aa26.01■■□□□ 1.75
RNF34-209ENST00000556562 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
RNF34-209ENST00000556562 FAM98CQ17RN3 349 aaKnown RBP25.98■■□□□ 1.75
RNF34-209ENST00000556562 STAC3Q96MF2 364 aa25.98■■□□□ 1.75
RNF34-209ENST00000556562 CRYBG1Q9Y4K1 1723 aa25.97■■□□□ 1.75
RNF34-209ENST00000556562 KRT27Q7Z3Y8 459 aa25.97■■□□□ 1.75
RNF34-209ENST00000556562 ONECUT3O60422 494 aaPredicted RBP25.96■■□□□ 1.75
RNF34-209ENST00000556562 COL14A1Q05707 1796 aaKnown RBP25.95■■□□□ 1.75
RNF34-209ENST00000556562 CDK19Q9BWU1 502 aa25.95■■□□□ 1.74
RNF34-209ENST00000556562 NBPF1Q3BBV0 1214 aa25.94■■□□□ 1.74
RNF34-209ENST00000556562 NUTM2GQ5VZR2 741 aa25.94■■□□□ 1.74
RNF34-209ENST00000556562 PRDM11Q9NQV5 511 aa25.93■■□□□ 1.74
RNF34-209ENST00000556562 ITSN1Q15811 1721 aa25.92■■□□□ 1.74
RNF34-209ENST00000556562 CHRNA2Q15822 529 aa25.91■■□□□ 1.74
RNF34-209ENST00000556562 FAM182BQ5T319 152 aa25.91■■□□□ 1.74
RNF34-209ENST00000556562 KIAA0232Q92628 1395 aa25.91■■□□□ 1.74
RNF34-209ENST00000556562 TOPAZ1Q8N9V7 1692 aa25.9■■□□□ 1.74
RNF34-209ENST00000556562 SF3B2Q13435 895 aaKnown RBP25.9■■□□□ 1.74
RNF34-209ENST00000556562 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
RNF34-209ENST00000556562 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
RNF34-209ENST00000556562 PHRF1Q9P1Y6 1649 aaKnown RBP25.88■■□□□ 1.73
RNF34-209ENST00000556562 ACEP12821 1306 aa25.88■■□□□ 1.73
RNF34-209ENST00000556562 ZC3H6P61129 1189 aaKnown RBP25.87■■□□□ 1.73
RNF34-209ENST00000556562 KIAA1210Q9ULL0 1709 aa25.86■■□□□ 1.73
RNF34-209ENST00000556562 POLR3AO14802 1390 aaPredicted RBP25.86■■□□□ 1.73
RNF34-209ENST00000556562 STRN4Q9NRL3 753 aa25.85■■□□□ 1.73
RNF34-209ENST00000556562 NBPF8Q3BBV2 869 aa25.84■■□□□ 1.73
RNF34-209ENST00000556562 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
RNF34-209ENST00000556562 THSD7AQ9UPZ6 1657 aa25.83■■□□□ 1.73
RNF34-209ENST00000556562 NRKQ7Z2Y5 1582 aa25.82■■□□□ 1.72
RNF34-209ENST00000556562 SRPK2P78362 688 aaKnown RBP25.81■■□□□ 1.72
RNF34-209ENST00000556562 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
RNF34-209ENST00000556562 CABP2Q9NPB3 220 aa25.81■■□□□ 1.72
RNF34-209ENST00000556562 CENPJQ9HC77 1338 aaPredicted RBP25.81■■□□□ 1.72
RNF34-209ENST00000556562 PLEKHG3A1L390 1219 aa25.8■■□□□ 1.72
RNF34-209ENST00000556562 SPATA31A1Q5TZJ5 1347 aa25.8■■□□□ 1.72
RNF34-209ENST00000556562 PPIP5K1Q6PFW1 1433 aa25.8■■□□□ 1.72
RNF34-209ENST00000556562 SIN3AQ96ST3 1273 aa25.79■■□□□ 1.72
RNF34-209ENST00000556562 PSDA5PKW4 1024 aaPredicted RBP25.78■■□□□ 1.72
RNF34-209ENST00000556562 BAG6P46379 1132 aa25.78■■□□□ 1.72
RNF34-209ENST00000556562 USP35Q9P2H5 1018 aa25.78■■□□□ 1.72
RNF34-209ENST00000556562 ABTB2Q8N961 1025 aa25.77■■□□□ 1.72
RNF34-209ENST00000556562 EN1Q05925 392 aaPredicted RBP25.76■■□□□ 1.71
RNF34-209ENST00000556562 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
RNF34-209ENST00000556562 SSH2Q76I76 1423 aa25.75■■□□□ 1.71
RNF34-209ENST00000556562 USP19O94966 1318 aa25.75■■□□□ 1.71
RNF34-209ENST00000556562 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
RNF34-209ENST00000556562 CAMTA1Q9Y6Y1 1673 aa25.74■■□□□ 1.71
RNF34-209ENST00000556562 LARP1Q6PKG0 1096 aaKnown RBP25.72■■□□□ 1.71
RNF34-209ENST00000556562 RGPD1P0DJD0 1748 aa25.71■■□□□ 1.71
RNF34-209ENST00000556562 EVA1CP58658 441 aa25.7■■□□□ 1.7
RNF34-209ENST00000556562 TNS1Q9HBL0 1735 aaKnown RBP25.7■■□□□ 1.7
RNF34-209ENST00000556562 LMO7Q8WWI1 1683 aa25.7■■□□□ 1.7
RNF34-209ENST00000556562 CPDO75976 1380 aa25.69■■□□□ 1.7
RNF34-209ENST00000556562 ZBTB7CA1YPR0 619 aa25.69■■□□□ 1.7
RNF34-209ENST00000556562 CABP1Q9NZU7 370 aa25.69■■□□□ 1.7
RNF34-209ENST00000556562 TRIM37O94972 964 aa25.68■■□□□ 1.7
RNF34-209ENST00000556562 GCP02774 474 aa25.67■■□□□ 1.7
RNF34-209ENST00000556562 USP6P35125 1406 aa25.67■■□□□ 1.7
RNF34-209ENST00000556562 NLRP13Q86W25 1043 aa25.67■■□□□ 1.7
RNF34-209ENST00000556562 EZH2Q15910 746 aaKnown RBP25.66■■□□□ 1.7
RNF34-209ENST00000556562 DISP2A7MBM2 1401 aa25.65■■□□□ 1.7
RNF34-209ENST00000556562 TRPM1Q7Z4N2 1603 aa25.65■■□□□ 1.7
RNF34-209ENST00000556562 R3HDM1Q15032 1099 aaKnown RBP25.64■■□□□ 1.7
RNF34-209ENST00000556562 COL5A2P05997 1499 aaPredicted RBP25.64■■□□□ 1.69
RNF34-209ENST00000556562 LRP5O75197 1615 aa25.63■■□□□ 1.69
RNF34-209ENST00000556562 FAM196AQ6ZSG2 479 aa25.63■■□□□ 1.69
RNF34-209ENST00000556562 BARGINQ6ZT62 677 aa25.63■■□□□ 1.69
RNF34-209ENST00000556562 TCP11L2Q8N4U5 519 aa25.63■■□□□ 1.69
RNF34-209ENST00000556562 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
RNF34-209ENST00000556562 NLRP6P59044 892 aa25.62■■□□□ 1.69
RNF34-209ENST00000556562 SLIT3O75094 1523 aa25.61■■□□□ 1.69
RNF34-209ENST00000556562 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
RNF34-209ENST00000556562 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
RNF34-209ENST00000556562 PIK3C2AO00443 1686 aa25.59■■□□□ 1.69
RNF34-209ENST00000556562 APBA3O96018 575 aa25.59■■□□□ 1.69
RNF34-209ENST00000556562 CAMKK2Q96RR4 588 aa25.59■■□□□ 1.69
RNF34-209ENST00000556562 BRD4O60885 1362 aaPredicted RBP25.58■■□□□ 1.69
RNF34-209ENST00000556562 SOX12O15370 315 aa25.56■■□□□ 1.68
RNF34-209ENST00000556562 CRB1P82279 1406 aa25.55■■□□□ 1.68
RNF34-209ENST00000556562 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
RNF34-209ENST00000556562 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
RNF34-209ENST00000556562 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
RNF34-209ENST00000556562 TTC21BQ7Z4L5 1316 aa25.52■■□□□ 1.68
RNF34-209ENST00000556562 AXIN2Q9Y2T1 843 aa25.51■■□□□ 1.67
RNF34-209ENST00000556562 CPSF1Q10570 1443 aaKnown RBP25.51■■□□□ 1.67
RNF34-209ENST00000556562 PARP4Q9UKK3 1724 aaKnown RBP25.51■■□□□ 1.67
RNF34-209ENST00000556562 LRRC37A3O60309 1634 aa25.49■■□□□ 1.67
RNF34-209ENST00000556562 TOM1L2Q6ZVM7 507 aa25.49■■□□□ 1.67
RNF34-209ENST00000556562 COL18A1P39060 1754 aa25.49■■□□□ 1.67
RNF34-209ENST00000556562 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
RNF34-209ENST00000556562 RREB1Q92766 1687 aa25.48■■□□□ 1.67
RNF34-209ENST00000556562 PARD3Q8TEW0 1356 aa25.47■■□□□ 1.67
RNF34-209ENST00000556562 NUP188Q5SRE5 1749 aa25.47■■□□□ 1.67
RNF34-209ENST00000556562 AKAP12Q02952 1782 aa25.46■■□□□ 1.67
RNF34-209ENST00000556562 OVOS2A0A0G2JMS6 1433 aa25.46■■□□□ 1.67
RNF34-209ENST00000556562 OVOS2A0A0J9YW53 1432 aa25.46■■□□□ 1.67
RNF34-209ENST00000556562 OVOS2Q6IE36 1432 aa25.46■■□□□ 1.67
RNF34-209ENST00000556562 KTN1Q86UP2 1357 aaKnown RBP25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms