RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
SRSF5-214ENST00000556436 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
SRSF5-214ENST00000556436 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
SRSF5-214ENST00000556436 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
SRSF5-214ENST00000556436 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
SRSF5-214ENST00000556436 KTN1Q86UP2 1357 aaKnown RBP18.29■□□□□ 0.52
SRSF5-214ENST00000556436 PHRF1Q9P1Y6 1649 aaKnown RBP18.28■□□□□ 0.52
SRSF5-214ENST00000556436 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
SRSF5-214ENST00000556436 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
SRSF5-214ENST00000556436 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
SRSF5-214ENST00000556436 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
SRSF5-214ENST00000556436 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
SRSF5-214ENST00000556436 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.51
SRSF5-214ENST00000556436 LMOD2Q6P5Q4 547 aa18.26■□□□□ 0.51
SRSF5-214ENST00000556436 BRD4O60885 1362 aaPredicted RBP18.26■□□□□ 0.51
SRSF5-214ENST00000556436 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
SRSF5-214ENST00000556436 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
SRSF5-214ENST00000556436 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
SRSF5-214ENST00000556436 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
SRSF5-214ENST00000556436 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
SRSF5-214ENST00000556436 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
SRSF5-214ENST00000556436 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
SRSF5-214ENST00000556436 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
SRSF5-214ENST00000556436 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
SRSF5-214ENST00000556436 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
SRSF5-214ENST00000556436 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
SRSF5-214ENST00000556436 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
SRSF5-214ENST00000556436 CABLES1Q8TDN4 633 aa18.23■□□□□ 0.51
SRSF5-214ENST00000556436 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
SRSF5-214ENST00000556436 KIF20BQ96Q89 1820 aa18.21■□□□□ 0.51
SRSF5-214ENST00000556436 USP19O94966 1318 aa18.21■□□□□ 0.51
SRSF5-214ENST00000556436 TTC21AQ8NDW8 1320 aa18.21■□□□□ 0.51
SRSF5-214ENST00000556436 SLIT3O75094 1523 aa18.2■□□□□ 0.5
SRSF5-214ENST00000556436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
SRSF5-214ENST00000556436 ABTB2Q8N961 1025 aa18.2■□□□□ 0.5
SRSF5-214ENST00000556436 NSD3Q9BZ95 1437 aa18.2■□□□□ 0.5
SRSF5-214ENST00000556436 NME9Q86XW9 330 aa18.19■□□□□ 0.5
SRSF5-214ENST00000556436 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
SRSF5-214ENST00000556436 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
SRSF5-214ENST00000556436 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
SRSF5-214ENST00000556436 OVOS2A0A0J9YW53 1432 aa18.17■□□□□ 0.5
SRSF5-214ENST00000556436 OVOS2Q6IE36 1432 aa18.17■□□□□ 0.5
SRSF5-214ENST00000556436 PLCH1Q4KWH8 1693 aa18.17■□□□□ 0.5
SRSF5-214ENST00000556436 NFAT5O94916 1531 aa18.16■□□□□ 0.5
SRSF5-214ENST00000556436 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
SRSF5-214ENST00000556436 NLRP6P59044 892 aa18.15■□□□□ 0.5
SRSF5-214ENST00000556436 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
SRSF5-214ENST00000556436 NLRP13Q86W25 1043 aa18.14■□□□□ 0.49
SRSF5-214ENST00000556436 PANK3Q9H999 370 aa18.14■□□□□ 0.49
SRSF5-214ENST00000556436 ANKRD26Q9UPS8 1709 aa18.13■□□□□ 0.49
SRSF5-214ENST00000556436 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
SRSF5-214ENST00000556436 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
SRSF5-214ENST00000556436 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
SRSF5-214ENST00000556436 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
SRSF5-214ENST00000556436 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
SRSF5-214ENST00000556436 NWD2Q9ULI1 1742 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 SLIT2O94813 1529 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 AFF2P51816 1311 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 FYB1O15117 783 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 GCP02774 474 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
SRSF5-214ENST00000556436 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
SRSF5-214ENST00000556436 LTN1O94822 1766 aa18.09■□□□□ 0.49
SRSF5-214ENST00000556436 COL18A1P39060 1754 aa18.09■□□□□ 0.49
SRSF5-214ENST00000556436 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.09■□□□□ 0.49
SRSF5-214ENST00000556436 CPDO75976 1380 aa18.09■□□□□ 0.49
SRSF5-214ENST00000556436 SOX12O15370 315 aa18.09■□□□□ 0.49
SRSF5-214ENST00000556436 ZC3H6P61129 1189 aaKnown RBP18.09■□□□□ 0.49
SRSF5-214ENST00000556436 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
SRSF5-214ENST00000556436 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
SRSF5-214ENST00000556436 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
SRSF5-214ENST00000556436 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
SRSF5-214ENST00000556436 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
SRSF5-214ENST00000556436 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
SRSF5-214ENST00000556436 PRDM11Q9NQV5 511 aa18.06■□□□□ 0.48
SRSF5-214ENST00000556436 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
SRSF5-214ENST00000556436 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
SRSF5-214ENST00000556436 COG3Q96JB2 828 aa18.05■□□□□ 0.48
SRSF5-214ENST00000556436 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
SRSF5-214ENST00000556436 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
SRSF5-214ENST00000556436 FBLN1P23142 703 aa18.03■□□□□ 0.48
SRSF5-214ENST00000556436 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
SRSF5-214ENST00000556436 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
SRSF5-214ENST00000556436 ATRNO75882 1429 aa18.02■□□□□ 0.48
SRSF5-214ENST00000556436 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
SRSF5-214ENST00000556436 POTEAQ6S8J7 498 aa18.02■□□□□ 0.48
SRSF5-214ENST00000556436 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
SRSF5-214ENST00000556436 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
SRSF5-214ENST00000556436 ABCC6O95255 1503 aa18.02■□□□□ 0.47
SRSF5-214ENST00000556436 NSD2O96028 1365 aa18.02■□□□□ 0.47
SRSF5-214ENST00000556436 USP21Q9UK80 565 aa18.01■□□□□ 0.47
SRSF5-214ENST00000556436 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
SRSF5-214ENST00000556436 AATKQ6ZMQ8 1374 aa18.01■□□□□ 0.47
SRSF5-214ENST00000556436 BTG4Q9NY30 223 aa18■□□□□ 0.47
SRSF5-214ENST00000556436 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
SRSF5-214ENST00000556436 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
SRSF5-214ENST00000556436 GLI3P10071 1580 aa17.99■□□□□ 0.47
SRSF5-214ENST00000556436 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
SRSF5-214ENST00000556436 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms