RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 MON2Q7Z3U7 1717 aa28.16■■■□□ 2.1
RCCD1-205ENST00000556333 POLR3GLQ9BT43 218 aa28.16■■■□□ 2.1
RCCD1-205ENST00000556333 ARHGEF10O15013 1369 aa28.14■■■□□ 2.1
RCCD1-205ENST00000556333 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
RCCD1-205ENST00000556333 SLC12A5Q9H2X9 1139 aa28.14■■■□□ 2.1
RCCD1-205ENST00000556333 USP6P35125 1406 aa28.13■■■□□ 2.09
RCCD1-205ENST00000556333 ZNF692Q9BU19 519 aaPredicted RBP28.13■■■□□ 2.09
RCCD1-205ENST00000556333 LRP6O75581 1613 aa28.13■■■□□ 2.09
RCCD1-205ENST00000556333 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
RCCD1-205ENST00000556333 MARF1Q9Y4F3 1742 aaKnown RBP28.12■■■□□ 2.09
RCCD1-205ENST00000556333 HDGFL2Q7Z4V5 671 aaPredicted RBP28.12■■■□□ 2.09
RCCD1-205ENST00000556333 KTN1Q86UP2 1357 aaKnown RBP28.11■■■□□ 2.09
RCCD1-205ENST00000556333 MYOM1P52179 1685 aa28.11■■■□□ 2.09
RCCD1-205ENST00000556333 HAP1P54257 671 aaPredicted RBP28.11■■■□□ 2.09
RCCD1-205ENST00000556333 NINLQ9Y2I6 1382 aa28.11■■■□□ 2.09
RCCD1-205ENST00000556333 NRKQ7Z2Y5 1582 aa28.09■■■□□ 2.09
RCCD1-205ENST00000556333 TERF2IPQ9NYB0 399 aa28.09■■■□□ 2.09
RCCD1-205ENST00000556333 CPSF1Q10570 1443 aaKnown RBP28.09■■■□□ 2.09
RCCD1-205ENST00000556333 ZEB1P37275 1124 aaPredicted RBP28.08■■■□□ 2.09
RCCD1-205ENST00000556333 BRD4O60885 1362 aaPredicted RBP28.08■■■□□ 2.09
RCCD1-205ENST00000556333 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
RCCD1-205ENST00000556333 NUTM2GQ5VZR2 741 aa28.07■■■□□ 2.08
RCCD1-205ENST00000556333 ABTB2Q8N961 1025 aa28.07■■■□□ 2.08
RCCD1-205ENST00000556333 ADAMTS2O95450 1211 aa28.06■■■□□ 2.08
RCCD1-205ENST00000556333 CABLES1Q8TDN4 633 aa28.06■■■□□ 2.08
RCCD1-205ENST00000556333 CRYBG1Q9Y4K1 1723 aa28.06■■■□□ 2.08
RCCD1-205ENST00000556333 A0A1W2PP64 1363 aa28.05■■■□□ 2.08
RCCD1-205ENST00000556333 PHRF1Q9P1Y6 1649 aaKnown RBP28.04■■■□□ 2.08
RCCD1-205ENST00000556333 PIK3C2AO00443 1686 aa28.03■■■□□ 2.08
RCCD1-205ENST00000556333 TTC21BQ7Z4L5 1316 aa28.01■■■□□ 2.07
RCCD1-205ENST00000556333 ZNF772Q68DY9 489 aaPredicted RBP28.01■■■□□ 2.07
RCCD1-205ENST00000556333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.01■■■□□ 2.07
RCCD1-205ENST00000556333 C8orf37Q96NL8 207 aa28.01■■■□□ 2.07
RCCD1-205ENST00000556333 SSH2Q76I76 1423 aa28.01■■■□□ 2.07
RCCD1-205ENST00000556333 ANKRD36BQ8N2N9 1353 aa28■■■□□ 2.07
RCCD1-205ENST00000556333 TTC21AQ8NDW8 1320 aa27.99■■■□□ 2.07
RCCD1-205ENST00000556333 C11orf95C9JLR9 678 aaPredicted RBP27.99■■■□□ 2.07
RCCD1-205ENST00000556333 NLRP13Q86W25 1043 aa27.99■■■□□ 2.07
RCCD1-205ENST00000556333 UPF1Q92900 1129 aaKnown RBP eCLIP27.99■■■□□ 2.07
RCCD1-205ENST00000556333 EDC4Q6P2E9 1401 aaKnown RBP27.99■■■□□ 2.07
RCCD1-205ENST00000556333 NLRP6P59044 892 aa27.98■■■□□ 2.07
RCCD1-205ENST00000556333 NGLY1Q96IV0 654 aa27.96■■■□□ 2.07
RCCD1-205ENST00000556333 KIF20BQ96Q89 1820 aa27.95■■■□□ 2.06
RCCD1-205ENST00000556333 KIF7Q2M1P5 1343 aa27.92■■■□□ 2.06
RCCD1-205ENST00000556333 PLCH1Q4KWH8 1693 aa27.92■■■□□ 2.06
RCCD1-205ENST00000556333 NME9Q86XW9 330 aa27.91■■■□□ 2.06
RCCD1-205ENST00000556333 AFF2P51816 1311 aa27.91■■■□□ 2.06
RCCD1-205ENST00000556333 RXRBP28702 533 aa27.9■■■□□ 2.06
RCCD1-205ENST00000556333 USP54Q70EL1 1684 aa27.9■■■□□ 2.06
RCCD1-205ENST00000556333 USP19O94966 1318 aa27.89■■■□□ 2.05
RCCD1-205ENST00000556333 COL14A1Q05707 1796 aaKnown RBP27.88■■■□□ 2.05
RCCD1-205ENST00000556333 ZRANB1Q9UGI0 708 aa27.88■■■□□ 2.05
RCCD1-205ENST00000556333 SLIT3O75094 1523 aa27.87■■■□□ 2.05
RCCD1-205ENST00000556333 NSD3Q9BZ95 1437 aa27.87■■■□□ 2.05
RCCD1-205ENST00000556333 ZC3H6P61129 1189 aaKnown RBP27.87■■■□□ 2.05
RCCD1-205ENST00000556333 SOX12O15370 315 aa27.86■■■□□ 2.05
RCCD1-205ENST00000556333 NWD2Q9ULI1 1742 aa27.86■■■□□ 2.05
RCCD1-205ENST00000556333 GCP02774 474 aa27.85■■■□□ 2.05
RCCD1-205ENST00000556333 PRDM11Q9NQV5 511 aa27.85■■■□□ 2.05
RCCD1-205ENST00000556333 CCDC7Q96M83 1385 aa27.85■■■□□ 2.05
RCCD1-205ENST00000556333 ZBTB7CA1YPR0 619 aa27.84■■■□□ 2.05
RCCD1-205ENST00000556333 PANK3Q9H999 370 aa27.84■■■□□ 2.05
RCCD1-205ENST00000556333 USP21Q9UK80 565 aa27.84■■■□□ 2.05
RCCD1-205ENST00000556333 CARD14Q9BXL6 1004 aa27.83■■■□□ 2.05
RCCD1-205ENST00000556333 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
RCCD1-205ENST00000556333 USP31Q70CQ4 1352 aa27.83■■■□□ 2.05
RCCD1-205ENST00000556333 KIAA0232Q92628 1395 aa27.83■■■□□ 2.05
RCCD1-205ENST00000556333 LTN1O94822 1766 aa27.82■■■□□ 2.04
RCCD1-205ENST00000556333 FAM83GA6ND36 823 aa27.82■■■□□ 2.04
RCCD1-205ENST00000556333 KCNH5Q8NCM2 988 aa27.82■■■□□ 2.04
RCCD1-205ENST00000556333 WASHC2AQ641Q2 1341 aa27.82■■■□□ 2.04
RCCD1-205ENST00000556333 COG3Q96JB2 828 aa27.81■■■□□ 2.04
RCCD1-205ENST00000556333 CHRNA2Q15822 529 aa27.8■■■□□ 2.04
RCCD1-205ENST00000556333 FNBP4Q8N3X1 1017 aaPredicted RBP27.8■■■□□ 2.04
RCCD1-205ENST00000556333 SLIT2O94813 1529 aa27.79■■■□□ 2.04
RCCD1-205ENST00000556333 GGNBP2Q9H3C7 697 aa27.79■■■□□ 2.04
RCCD1-205ENST00000556333 OVOS2A0A0J9YW53 1432 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 OVOS2Q6IE36 1432 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 FYB1O15117 783 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 RGPD5Q99666 1765 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 NRAPQ86VF7 1730 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
RCCD1-205ENST00000556333 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
RCCD1-205ENST00000556333 CGNL1Q0VF96 1302 aa27.76■■■□□ 2.03
RCCD1-205ENST00000556333 QTRT2Q9H974 415 aaKnown RBP27.76■■■□□ 2.03
RCCD1-205ENST00000556333 NFAT5O94916 1531 aa27.76■■■□□ 2.03
RCCD1-205ENST00000556333 BCL9LQ86UU0 1499 aa27.76■■■□□ 2.03
RCCD1-205ENST00000556333 CPDO75976 1380 aa27.75■■■□□ 2.03
RCCD1-205ENST00000556333 UNC5CLQ8IV45 518 aa27.74■■■□□ 2.03
RCCD1-205ENST00000556333 CDK12Q9NYV4 1490 aaPredicted RBP27.74■■■□□ 2.03
RCCD1-205ENST00000556333 LMO7Q8WWI1 1683 aa27.73■■■□□ 2.03
RCCD1-205ENST00000556333 TRPC5Q9UL62 973 aaPredicted RBP27.73■■■□□ 2.03
RCCD1-205ENST00000556333 KNSTRNQ9Y448 316 aa27.72■■■□□ 2.03
RCCD1-205ENST00000556333 COL18A1P39060 1754 aa27.71■■■□□ 2.03
RCCD1-205ENST00000556333 CCDC9Q9Y3X0 531 aaKnown RBP27.71■■■□□ 2.03
RCCD1-205ENST00000556333 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
RCCD1-205ENST00000556333 STRN4Q9NRL3 753 aa27.69■■■□□ 2.02
RCCD1-205ENST00000556333 CAMTA1Q9Y6Y1 1673 aa27.68■■■□□ 2.02
RCCD1-205ENST00000556333 ATRNO75882 1429 aa27.68■■■□□ 2.02
RCCD1-205ENST00000556333 EVA1CP58658 441 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms