RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 GPRASP1Q5JY77 1395 aa23.46■■□□□ 1.35
SDR39U1-217ENST00000556249 ANKARQ7Z5J8 1434 aa23.46■■□□□ 1.35
SDR39U1-217ENST00000556249 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
SDR39U1-217ENST00000556249 CAMKK2Q96RR4 588 aa23.46■■□□□ 1.35
SDR39U1-217ENST00000556249 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
SDR39U1-217ENST00000556249 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
SDR39U1-217ENST00000556249 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
SDR39U1-217ENST00000556249 PRDM11Q9NQV5 511 aa23.45■■□□□ 1.34
SDR39U1-217ENST00000556249 TRAK1Q9UPV9 953 aa23.45■■□□□ 1.34
SDR39U1-217ENST00000556249 ALS2Q96Q42 1657 aa23.44■■□□□ 1.34
SDR39U1-217ENST00000556249 DISP2A7MBM2 1401 aa23.44■■□□□ 1.34
SDR39U1-217ENST00000556249 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
SDR39U1-217ENST00000556249 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
SDR39U1-217ENST00000556249 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
SDR39U1-217ENST00000556249 APBA3O96018 575 aa23.42■■□□□ 1.34
SDR39U1-217ENST00000556249 SPATA31A1Q5TZJ5 1347 aa23.41■■□□□ 1.34
SDR39U1-217ENST00000556249 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-217ENST00000556249 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
SDR39U1-217ENST00000556249 FAM196AQ6ZSG2 479 aa23.4■■□□□ 1.34
SDR39U1-217ENST00000556249 DLC1Q96QB1 1528 aa23.39■■□□□ 1.34
SDR39U1-217ENST00000556249 YY1P25490 414 aa23.39■■□□□ 1.33
SDR39U1-217ENST00000556249 ADGRB2O60241 1585 aa23.39■■□□□ 1.33
SDR39U1-217ENST00000556249 KIAA0232Q92628 1395 aa23.39■■□□□ 1.33
SDR39U1-217ENST00000556249 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
SDR39U1-217ENST00000556249 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
SDR39U1-217ENST00000556249 WASLO00401 505 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-217ENST00000556249 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
SDR39U1-217ENST00000556249 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
SDR39U1-217ENST00000556249 TULP4Q9NRJ4 1543 aa23.34■■□□□ 1.33
SDR39U1-217ENST00000556249 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
SDR39U1-217ENST00000556249 PDE3BQ13370 1112 aa23.32■■□□□ 1.32
SDR39U1-217ENST00000556249 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
SDR39U1-217ENST00000556249 EIF3AQ14152 1382 aaKnown RBP23.31■■□□□ 1.32
SDR39U1-217ENST00000556249 EVA1CP58658 441 aa23.31■■□□□ 1.32
SDR39U1-217ENST00000556249 PARD3Q8TEW0 1356 aa23.29■■□□□ 1.32
SDR39U1-217ENST00000556249 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
SDR39U1-217ENST00000556249 NBPF14Q5TI25 921 aa23.29■■□□□ 1.32
SDR39U1-217ENST00000556249 LARP1Q6PKG0 1096 aaKnown RBP23.29■■□□□ 1.32
SDR39U1-217ENST00000556249 NUDT16Q96DE0 195 aaKnown RBP23.28■■□□□ 1.32
SDR39U1-217ENST00000556249 NUP188Q5SRE5 1749 aa23.28■■□□□ 1.32
SDR39U1-217ENST00000556249 PPP1R1BQ9UD71 204 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-217ENST00000556249 RREB1Q92766 1687 aa23.27■■□□□ 1.32
SDR39U1-217ENST00000556249 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-217ENST00000556249 SSH2Q76I76 1423 aa23.26■■□□□ 1.31
SDR39U1-217ENST00000556249 BARGINQ6ZT62 677 aa23.26■■□□□ 1.31
SDR39U1-217ENST00000556249 DCAF11Q8TEB1 546 aa23.24■■□□□ 1.31
SDR39U1-217ENST00000556249 SPON1Q9HCB6 807 aa23.24■■□□□ 1.31
SDR39U1-217ENST00000556249 KCNQ2O43526 872 aa23.23■■□□□ 1.31
SDR39U1-217ENST00000556249 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
SDR39U1-217ENST00000556249 ATP7BP35670 1465 aa23.23■■□□□ 1.31
SDR39U1-217ENST00000556249 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
SDR39U1-217ENST00000556249 ACEP12821 1306 aa23.2■■□□□ 1.3
SDR39U1-217ENST00000556249 CDK19Q9BWU1 502 aa23.2■■□□□ 1.3
SDR39U1-217ENST00000556249 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
SDR39U1-217ENST00000556249 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
SDR39U1-217ENST00000556249 DCAF8L1A6NGE4 600 aa23.17■■□□□ 1.3
SDR39U1-217ENST00000556249 NRKQ7Z2Y5 1582 aa23.16■■□□□ 1.3
SDR39U1-217ENST00000556249 ZBTB7CA1YPR0 619 aa23.15■■□□□ 1.3
SDR39U1-217ENST00000556249 PDGFDQ9GZP0 370 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-217ENST00000556249 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.3
SDR39U1-217ENST00000556249 ARHGEF28Q8N1W1 1705 aaKnown RBP23.14■■□□□ 1.3
SDR39U1-217ENST00000556249 PTF1AQ7RTS3 328 aa23.14■■□□□ 1.29
SDR39U1-217ENST00000556249 NINLQ9Y2I6 1382 aa23.14■■□□□ 1.29
SDR39U1-217ENST00000556249 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
SDR39U1-217ENST00000556249 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
SDR39U1-217ENST00000556249 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
SDR39U1-217ENST00000556249 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-217ENST00000556249 CPDO75976 1380 aa23.12■■□□□ 1.29
SDR39U1-217ENST00000556249 GCP02774 474 aa23.11■■□□□ 1.29
SDR39U1-217ENST00000556249 USP19O94966 1318 aa23.1■■□□□ 1.29
SDR39U1-217ENST00000556249 PLEKHG3A1L390 1219 aa23.1■■□□□ 1.29
SDR39U1-217ENST00000556249 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
SDR39U1-217ENST00000556249 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
SDR39U1-217ENST00000556249 ZBTB7AO95365 584 aa23.09■■□□□ 1.29
SDR39U1-217ENST00000556249 PARP4Q9UKK3 1724 aaKnown RBP23.08■■□□□ 1.29
SDR39U1-217ENST00000556249 NLRP13Q86W25 1043 aa23.08■■□□□ 1.29
SDR39U1-217ENST00000556249 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
SDR39U1-217ENST00000556249 PLSCR1O15162 318 aa23.07■■□□□ 1.28
SDR39U1-217ENST00000556249 OVOS2A0A0G2JMS6 1433 aa23.07■■□□□ 1.28
SDR39U1-217ENST00000556249 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
SDR39U1-217ENST00000556249 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
SDR39U1-217ENST00000556249 PROM2Q8N271 834 aa23.06■■□□□ 1.28
SDR39U1-217ENST00000556249 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
SDR39U1-217ENST00000556249 CRB1P82279 1406 aa23.06■■□□□ 1.28
SDR39U1-217ENST00000556249 PEAK1Q9H792 1746 aa23.05■■□□□ 1.28
SDR39U1-217ENST00000556249 DDB1Q16531 1140 aa23.05■■□□□ 1.28
SDR39U1-217ENST00000556249 ATF5Q9Y2D1 282 aaPredicted RBP23.05■■□□□ 1.28
SDR39U1-217ENST00000556249 TOM1L2Q6ZVM7 507 aa23.03■■□□□ 1.28
SDR39U1-217ENST00000556249 ZNF784Q8NCA9 323 aaPredicted RBP23.03■■□□□ 1.28
SDR39U1-217ENST00000556249 CASZ1Q86V15 1759 aa23.03■■□□□ 1.28
SDR39U1-217ENST00000556249 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
SDR39U1-217ENST00000556249 C11orf95C9JLR9 678 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-217ENST00000556249 PTGER2P43116 358 aa23.02■■□□□ 1.28
SDR39U1-217ENST00000556249 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
SDR39U1-217ENST00000556249 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
SDR39U1-217ENST00000556249 LRRC37A3O60309 1634 aa23.01■■□□□ 1.27
SDR39U1-217ENST00000556249 PPIP5K1Q6PFW1 1433 aa23.01■■□□□ 1.27
SDR39U1-217ENST00000556249 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-217ENST00000556249 STAC3Q96MF2 364 aa23.01■■□□□ 1.27
SDR39U1-217ENST00000556249 NLRP6P59044 892 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms