RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 KIF20BQ96Q89 1820 aa23.08■■□□□ 1.29
LRP1-210ENST00000556247 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
LRP1-210ENST00000556247 NME9Q86XW9 330 aa23.07■■□□□ 1.28
LRP1-210ENST00000556247 TTC21AQ8NDW8 1320 aa23.06■■□□□ 1.28
LRP1-210ENST00000556247 C1orf167Q5SNV9 1468 aa23.05■■□□□ 1.28
LRP1-210ENST00000556247 ANKRD26Q9UPS8 1709 aa23.05■■□□□ 1.28
LRP1-210ENST00000556247 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
LRP1-210ENST00000556247 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
LRP1-210ENST00000556247 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
LRP1-210ENST00000556247 COG3Q96JB2 828 aa23.04■■□□□ 1.28
LRP1-210ENST00000556247 PSME1Q06323 249 aa23.03■■□□□ 1.28
LRP1-210ENST00000556247 MST1RQ04912 1400 aa23.02■■□□□ 1.28
LRP1-210ENST00000556247 SSH2Q76I76 1423 aa23.02■■□□□ 1.28
LRP1-210ENST00000556247 NRKQ7Z2Y5 1582 aa23.01■■□□□ 1.27
LRP1-210ENST00000556247 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
LRP1-210ENST00000556247 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
LRP1-210ENST00000556247 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
LRP1-210ENST00000556247 MTHFSP49914 203 aa22.98■■□□□ 1.27
LRP1-210ENST00000556247 CFAP53Q96M91 514 aa22.98■■□□□ 1.27
LRP1-210ENST00000556247 KIF1AQ12756 1690 aa22.97■■□□□ 1.27
LRP1-210ENST00000556247 FOXO3O43524 673 aa22.97■■□□□ 1.27
LRP1-210ENST00000556247 CENPBP07199 599 aaPredicted RBP22.95■■□□□ 1.26
LRP1-210ENST00000556247 WDR43Q15061 677 aaKnown RBP eCLIP22.95■■□□□ 1.26
LRP1-210ENST00000556247 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
LRP1-210ENST00000556247 USP31Q70CQ4 1352 aa22.94■■□□□ 1.26
LRP1-210ENST00000556247 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
LRP1-210ENST00000556247 SLAIN2Q9P270 581 aa22.94■■□□□ 1.26
LRP1-210ENST00000556247 NLRP6P59044 892 aa22.93■■□□□ 1.26
LRP1-210ENST00000556247 OVOS2A0A0J9YW53 1432 aa22.92■■□□□ 1.26
LRP1-210ENST00000556247 OVOS2Q6IE36 1432 aa22.92■■□□□ 1.26
LRP1-210ENST00000556247 HNRNPUQ00839 825 aaKnown RBP eCLIP22.92■■□□□ 1.26
LRP1-210ENST00000556247 AATKQ6ZMQ8 1374 aa22.91■■□□□ 1.26
LRP1-210ENST00000556247 LTBP4Q8N2S1 1624 aa22.9■■□□□ 1.26
LRP1-210ENST00000556247 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
LRP1-210ENST00000556247 POLKQ9UBT6 870 aa22.9■■□□□ 1.26
LRP1-210ENST00000556247 NPHP3Q7Z494 1330 aa22.89■■□□□ 1.26
LRP1-210ENST00000556247 PIK3C2AO00443 1686 aa22.88■■□□□ 1.25
LRP1-210ENST00000556247 FBLN1P23142 703 aa22.88■■□□□ 1.25
LRP1-210ENST00000556247 NUTM2GQ5VZR2 741 aa22.88■■□□□ 1.25
LRP1-210ENST00000556247 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
LRP1-210ENST00000556247 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
LRP1-210ENST00000556247 ADAMTS8Q9UP79 889 aa22.86■■□□□ 1.25
LRP1-210ENST00000556247 MAP2P11137 1827 aaKnown RBP22.86■■□□□ 1.25
LRP1-210ENST00000556247 INSRP06213 1382 aa22.86■■□□□ 1.25
LRP1-210ENST00000556247 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
LRP1-210ENST00000556247 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
LRP1-210ENST00000556247 SOX12O15370 315 aa22.84■■□□□ 1.25
LRP1-210ENST00000556247 RRS1Q15050 365 aaKnown RBP22.84■■□□□ 1.25
LRP1-210ENST00000556247 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
LRP1-210ENST00000556247 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
LRP1-210ENST00000556247 USP54Q70EL1 1684 aa22.82■■□□□ 1.24
LRP1-210ENST00000556247 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
LRP1-210ENST00000556247 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
LRP1-210ENST00000556247 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
LRP1-210ENST00000556247 TRPM3Q9HCF6 1732 aaPredicted RBP22.82■■□□□ 1.24
LRP1-210ENST00000556247 SMG6Q86US8 1419 aaKnown RBP22.82■■□□□ 1.24
LRP1-210ENST00000556247 KCNH5Q8NCM2 988 aa22.79■■□□□ 1.24
LRP1-210ENST00000556247 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
LRP1-210ENST00000556247 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
LRP1-210ENST00000556247 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
LRP1-210ENST00000556247 COL3A1P02461 1466 aaPredicted RBP22.78■■□□□ 1.24
LRP1-210ENST00000556247 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
LRP1-210ENST00000556247 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
LRP1-210ENST00000556247 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
LRP1-210ENST00000556247 PXDNQ92626 1479 aa22.77■■□□□ 1.24
LRP1-210ENST00000556247 MAP3K19Q56UN5 1328 aa22.77■■□□□ 1.24
LRP1-210ENST00000556247 MARF1Q9Y4F3 1742 aaKnown RBP22.77■■□□□ 1.23
LRP1-210ENST00000556247 AMPHP49418 695 aa22.76■■□□□ 1.23
LRP1-210ENST00000556247 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
LRP1-210ENST00000556247 ZBED9Q6R2W3 1325 aa22.75■■□□□ 1.23
LRP1-210ENST00000556247 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
LRP1-210ENST00000556247 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
LRP1-210ENST00000556247 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
LRP1-210ENST00000556247 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
LRP1-210ENST00000556247 GCP02774 474 aa22.73■■□□□ 1.23
LRP1-210ENST00000556247 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
LRP1-210ENST00000556247 USP19O94966 1318 aa22.73■■□□□ 1.23
LRP1-210ENST00000556247 ARHGEF10O15013 1369 aa22.73■■□□□ 1.23
LRP1-210ENST00000556247 TOM1O60784 492 aa22.72■■□□□ 1.23
LRP1-210ENST00000556247 IL13P35225 146 aa22.72■■□□□ 1.23
LRP1-210ENST00000556247 FLT4P35916 1363 aa22.72■■□□□ 1.23
LRP1-210ENST00000556247 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
LRP1-210ENST00000556247 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
LRP1-210ENST00000556247 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
LRP1-210ENST00000556247 SLIT3O75094 1523 aa22.71■■□□□ 1.23
LRP1-210ENST00000556247 HSP90AB2PQ58FF8 381 aa22.7■■□□□ 1.22
LRP1-210ENST00000556247 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
LRP1-210ENST00000556247 PEAK1Q9H792 1746 aa22.68■■□□□ 1.22
LRP1-210ENST00000556247 NFAT5O94916 1531 aa22.68■■□□□ 1.22
LRP1-210ENST00000556247 ZBTB7CA1YPR0 619 aa22.68■■□□□ 1.22
LRP1-210ENST00000556247 EIF4A2Q14240 407 aaKnown RBP22.68■■□□□ 1.22
LRP1-210ENST00000556247 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
LRP1-210ENST00000556247 NHSL1Q5SYE7 1610 aa22.68■■□□□ 1.22
LRP1-210ENST00000556247 RTL1A6NKG5 1358 aa22.67■■□□□ 1.22
LRP1-210ENST00000556247 HOXC9P31274 260 aa22.67■■□□□ 1.22
LRP1-210ENST00000556247 ROBO1Q9Y6N7 1651 aa22.66■■□□□ 1.22
LRP1-210ENST00000556247 APAF1O14727 1248 aa22.66■■□□□ 1.22
LRP1-210ENST00000556247 FCHSD2O94868 740 aa22.66■■□□□ 1.22
LRP1-210ENST00000556247 IP6K1Q92551 441 aa22.66■■□□□ 1.22
LRP1-210ENST00000556247 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms