RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
ACTN1-215ENST00000555616 QTRT2Q9H974 415 aaKnown RBP13.69□□□□□ -0.22
ACTN1-215ENST00000555616 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
ACTN1-215ENST00000555616 ACEP12821 1306 aa13.68□□□□□ -0.22
ACTN1-215ENST00000555616 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
ACTN1-215ENST00000555616 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-215ENST00000555616 PLCH1Q4KWH8 1693 aa13.68□□□□□ -0.22
ACTN1-215ENST00000555616 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
ACTN1-215ENST00000555616 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
ACTN1-215ENST00000555616 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
ACTN1-215ENST00000555616 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
ACTN1-215ENST00000555616 PHRF1Q9P1Y6 1649 aaKnown RBP13.66□□□□□ -0.22
ACTN1-215ENST00000555616 HAP1P54257 671 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-215ENST00000555616 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
ACTN1-215ENST00000555616 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-215ENST00000555616 USP6P35125 1406 aa13.64□□□□□ -0.23
ACTN1-215ENST00000555616 COL14A1Q05707 1796 aaKnown RBP13.64□□□□□ -0.23
ACTN1-215ENST00000555616 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
ACTN1-215ENST00000555616 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-215ENST00000555616 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
ACTN1-215ENST00000555616 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
ACTN1-215ENST00000555616 GLI3P10071 1580 aa13.63□□□□□ -0.23
ACTN1-215ENST00000555616 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
ACTN1-215ENST00000555616 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
ACTN1-215ENST00000555616 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
ACTN1-215ENST00000555616 USP19O94966 1318 aa13.62□□□□□ -0.23
ACTN1-215ENST00000555616 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
ACTN1-215ENST00000555616 GJD4Q96KN9 370 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-215ENST00000555616 CABP1Q9NZU7 370 aa13.61□□□□□ -0.23
ACTN1-215ENST00000555616 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
ACTN1-215ENST00000555616 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
ACTN1-215ENST00000555616 VPS72Q15906 364 aa13.6□□□□□ -0.23
ACTN1-215ENST00000555616 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
ACTN1-215ENST00000555616 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
ACTN1-215ENST00000555616 SLIT3O75094 1523 aa13.59□□□□□ -0.23
ACTN1-215ENST00000555616 CPDO75976 1380 aa13.58□□□□□ -0.23
ACTN1-215ENST00000555616 KIAA0232Q92628 1395 aa13.58□□□□□ -0.23
ACTN1-215ENST00000555616 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 TESK2Q96S53 571 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 USP47Q96K76 1375 aa13.57□□□□□ -0.24
ACTN1-215ENST00000555616 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
ACTN1-215ENST00000555616 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
ACTN1-215ENST00000555616 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
ACTN1-215ENST00000555616 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
ACTN1-215ENST00000555616 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-215ENST00000555616 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
ACTN1-215ENST00000555616 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
ACTN1-215ENST00000555616 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
ACTN1-215ENST00000555616 KTN1Q86UP2 1357 aaKnown RBP13.54□□□□□ -0.24
ACTN1-215ENST00000555616 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
ACTN1-215ENST00000555616 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
ACTN1-215ENST00000555616 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-215ENST00000555616 GCP02774 474 aa13.53□□□□□ -0.24
ACTN1-215ENST00000555616 EP400Q96L91 3159 aa13.53□□□□□ -0.24
ACTN1-215ENST00000555616 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
ACTN1-215ENST00000555616 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
ACTN1-215ENST00000555616 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
ACTN1-215ENST00000555616 CHRNA2Q15822 529 aa13.52□□□□□ -0.25
ACTN1-215ENST00000555616 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
ACTN1-215ENST00000555616 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
ACTN1-215ENST00000555616 CAMTA1Q9Y6Y1 1673 aa13.52□□□□□ -0.25
ACTN1-215ENST00000555616 NFAT5O94916 1531 aa13.51□□□□□ -0.25
ACTN1-215ENST00000555616 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
ACTN1-215ENST00000555616 A0A1W2PP64 1363 aa13.51□□□□□ -0.25
ACTN1-215ENST00000555616 NLRP6P59044 892 aa13.51□□□□□ -0.25
ACTN1-215ENST00000555616 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
ACTN1-215ENST00000555616 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
ACTN1-215ENST00000555616 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
ACTN1-215ENST00000555616 ABCC6O95255 1503 aa13.49□□□□□ -0.25
ACTN1-215ENST00000555616 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-215ENST00000555616 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
ACTN1-215ENST00000555616 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
ACTN1-215ENST00000555616 SLC12A5Q9H2X9 1139 aa13.49□□□□□ -0.25
ACTN1-215ENST00000555616 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
ACTN1-215ENST00000555616 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-215ENST00000555616 TMC1Q8TDI8 760 aa13.48□□□□□ -0.25
ACTN1-215ENST00000555616 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
ACTN1-215ENST00000555616 FAM98CQ17RN3 349 aaKnown RBP13.47□□□□□ -0.25
ACTN1-215ENST00000555616 COL18A1P39060 1754 aa13.47□□□□□ -0.25
ACTN1-215ENST00000555616 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
ACTN1-215ENST00000555616 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
ACTN1-215ENST00000555616 TMF1P82094 1093 aa13.46□□□□□ -0.25
ACTN1-215ENST00000555616 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
ACTN1-215ENST00000555616 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
ACTN1-215ENST00000555616 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
ACTN1-215ENST00000555616 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
ACTN1-215ENST00000555616 NME9Q86XW9 330 aa13.45□□□□□ -0.26
ACTN1-215ENST00000555616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.262e-7■■■■□ 20.7
ACTN1-215ENST00000555616 BLMP54132 1417 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-215ENST00000555616 CRB1P82279 1406 aa13.45□□□□□ -0.26
ACTN1-215ENST00000555616 LARP1Q6PKG0 1096 aaKnown RBP13.44□□□□□ -0.26
ACTN1-215ENST00000555616 BARGINQ6ZT62 677 aa13.44□□□□□ -0.26
ACTN1-215ENST00000555616 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
ACTN1-215ENST00000555616 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
ACTN1-215ENST00000555616 MYOM1P52179 1685 aa13.44□□□□□ -0.26
ACTN1-215ENST00000555616 A0A0G2JS52 829 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms