RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
NEK9-206ENST00000555537 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
NEK9-206ENST00000555537 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
NEK9-206ENST00000555537 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
NEK9-206ENST00000555537 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
NEK9-206ENST00000555537 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
NEK9-206ENST00000555537 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
NEK9-206ENST00000555537 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
NEK9-206ENST00000555537 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
NEK9-206ENST00000555537 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
NEK9-206ENST00000555537 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
NEK9-206ENST00000555537 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
NEK9-206ENST00000555537 SPATA31A1Q5TZJ5 1347 aa12.49□□□□□ -0.41
NEK9-206ENST00000555537 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
NEK9-206ENST00000555537 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
NEK9-206ENST00000555537 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
NEK9-206ENST00000555537 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
NEK9-206ENST00000555537 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
NEK9-206ENST00000555537 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
NEK9-206ENST00000555537 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
NEK9-206ENST00000555537 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
NEK9-206ENST00000555537 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
NEK9-206ENST00000555537 EVA1CP58658 441 aa12.46□□□□□ -0.41
NEK9-206ENST00000555537 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
NEK9-206ENST00000555537 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
NEK9-206ENST00000555537 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
NEK9-206ENST00000555537 NBPF14Q5TI25 921 aa12.45□□□□□ -0.42
NEK9-206ENST00000555537 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
NEK9-206ENST00000555537 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
NEK9-206ENST00000555537 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
NEK9-206ENST00000555537 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
NEK9-206ENST00000555537 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
NEK9-206ENST00000555537 KCNQ2O43526 872 aa12.42□□□□□ -0.42
NEK9-206ENST00000555537 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
NEK9-206ENST00000555537 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
NEK9-206ENST00000555537 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
NEK9-206ENST00000555537 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
NEK9-206ENST00000555537 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
NEK9-206ENST00000555537 TULP4Q9NRJ4 1543 aa12.4□□□□□ -0.42
NEK9-206ENST00000555537 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.43
NEK9-206ENST00000555537 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
NEK9-206ENST00000555537 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
NEK9-206ENST00000555537 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
NEK9-206ENST00000555537 PDGFDQ9GZP0 370 aaPredicted RBP12.39□□□□□ -0.43
NEK9-206ENST00000555537 RREB1Q92766 1687 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
NEK9-206ENST00000555537 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
NEK9-206ENST00000555537 ACEP12821 1306 aa12.37□□□□□ -0.43
NEK9-206ENST00000555537 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
NEK9-206ENST00000555537 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
NEK9-206ENST00000555537 PHRF1Q9P1Y6 1649 aaKnown RBP12.36□□□□□ -0.43
NEK9-206ENST00000555537 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
NEK9-206ENST00000555537 ATP7BP35670 1465 aa12.34□□□□□ -0.43
NEK9-206ENST00000555537 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
NEK9-206ENST00000555537 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
NEK9-206ENST00000555537 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
NEK9-206ENST00000555537 GCP02774 474 aa12.33□□□□□ -0.44
NEK9-206ENST00000555537 PROM2Q8N271 834 aa12.33□□□□□ -0.44
NEK9-206ENST00000555537 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
NEK9-206ENST00000555537 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
NEK9-206ENST00000555537 PLSCR1O15162 318 aa12.32□□□□□ -0.44
NEK9-206ENST00000555537 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
NEK9-206ENST00000555537 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
NEK9-206ENST00000555537 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NEK9-206ENST00000555537 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
NEK9-206ENST00000555537 NLRP13Q86W25 1043 aa12.31□□□□□ -0.44
NEK9-206ENST00000555537 CPDO75976 1380 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 PTGER2P43116 358 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 DDB1Q16531 1140 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 USP19O94966 1318 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
NEK9-206ENST00000555537 COL5A2P05997 1499 aaPredicted RBP12.29□□□□□ -0.44
NEK9-206ENST00000555537 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
NEK9-206ENST00000555537 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
NEK9-206ENST00000555537 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
NEK9-206ENST00000555537 SYT17Q9BSW7 474 aa12.28□□□□□ -0.44
NEK9-206ENST00000555537 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
NEK9-206ENST00000555537 PARP4Q9UKK3 1724 aaKnown RBP12.28□□□□□ -0.44
NEK9-206ENST00000555537 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
NEK9-206ENST00000555537 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
NEK9-206ENST00000555537 CRB1P82279 1406 aa12.28□□□□□ -0.44
NEK9-206ENST00000555537 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
NEK9-206ENST00000555537 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 C11orf95C9JLR9 678 aaPredicted RBP12.27□□□□□ -0.45
NEK9-206ENST00000555537 NLRP6P59044 892 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
NEK9-206ENST00000555537 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 PEAK1Q9H792 1746 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
NEK9-206ENST00000555537 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
NEK9-206ENST00000555537 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
NEK9-206ENST00000555537 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
NEK9-206ENST00000555537 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms