RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 NEUROD2Q15784 382 aa27.57■■■□□ 2
ARHGEF40-204ENST00000555038 RRP7AQ9Y3A4 280 aaKnown RBP27.57■■■□□ 2
ARHGEF40-204ENST00000555038 CT47B1P0C2W7 299 aaPredicted RBP27.56■■■□□ 2
ARHGEF40-204ENST00000555038 AAMPQ13685 434 aa27.56■■■□□ 2
ARHGEF40-204ENST00000555038 PLEKHF1Q96S99 279 aa27.56■■■□□ 2
ARHGEF40-204ENST00000555038 ANP32AP39687 249 aaKnown RBP27.55■■■□□ 2
ARHGEF40-204ENST00000555038 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
ARHGEF40-204ENST00000555038 PPIP5K1Q6PFW1 1433 aa27.54■■■□□ 2
ARHGEF40-204ENST00000555038 ERICH6Q7L0X2 663 aa27.53■■■□□ 2
ARHGEF40-204ENST00000555038 MAPK8IP3Q9UPT6 1336 aa27.53■■■□□ 2
ARHGEF40-204ENST00000555038 PLEKHG1Q9ULL1 1385 aa27.53■■■□□ 2
ARHGEF40-204ENST00000555038 IL16Q14005 1332 aa27.52■■■□□ 2
ARHGEF40-204ENST00000555038 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
ARHGEF40-204ENST00000555038 RARSP54136 660 aaKnown RBP27.52■■■□□ 2
ARHGEF40-204ENST00000555038 MON2Q7Z3U7 1717 aa27.51■■□□□ 1.99
ARHGEF40-204ENST00000555038 PDE4AP27815 886 aa27.51■■□□□ 1.99
ARHGEF40-204ENST00000555038 BACH2Q9BYV9 841 aa27.51■■□□□ 1.99
ARHGEF40-204ENST00000555038 ADAMTS13Q76LX8 1427 aa27.5■■□□□ 1.99
ARHGEF40-204ENST00000555038 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
ARHGEF40-204ENST00000555038 CCDC61Q9Y6R9 512 aa27.49■■□□□ 1.99
ARHGEF40-204ENST00000555038 CANXP27824 592 aaKnown RBP27.48■■□□□ 1.99
ARHGEF40-204ENST00000555038 TXNDC2Q86VQ3 553 aa27.48■■□□□ 1.99
ARHGEF40-204ENST00000555038 AATKQ6ZMQ8 1374 aa27.48■■□□□ 1.99
ARHGEF40-204ENST00000555038 AKAP12Q02952 1782 aa27.48■■□□□ 1.99
ARHGEF40-204ENST00000555038 FCHSD2O94868 740 aa27.47■■□□□ 1.99
ARHGEF40-204ENST00000555038 NUDT16Q96DE0 195 aaKnown RBP27.47■■□□□ 1.99
ARHGEF40-204ENST00000555038 ITSN1Q15811 1721 aa27.45■■□□□ 1.99
ARHGEF40-204ENST00000555038 ZNF692Q9BU19 519 aaPredicted RBP27.45■■□□□ 1.99
ARHGEF40-204ENST00000555038 CDK12Q9NYV4 1490 aaPredicted RBP27.45■■□□□ 1.98
ARHGEF40-204ENST00000555038 IPO9Q96P70 1041 aaKnown RBP27.45■■□□□ 1.98
ARHGEF40-204ENST00000555038 POLKQ9UBT6 870 aa27.45■■□□□ 1.98
ARHGEF40-204ENST00000555038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.44■■□□□ 1.98
ARHGEF40-204ENST00000555038 SLIT1O75093 1534 aa27.43■■□□□ 1.98
ARHGEF40-204ENST00000555038 TRIM35Q9UPQ4 493 aa27.43■■□□□ 1.98
ARHGEF40-204ENST00000555038 C3P01024 1663 aa27.42■■□□□ 1.98
ARHGEF40-204ENST00000555038 ARHGAP23Q9P227 1491 aa27.41■■□□□ 1.98
ARHGEF40-204ENST00000555038 CLUAP1Q96AJ1 413 aa27.41■■□□□ 1.98
ARHGEF40-204ENST00000555038 NOP58Q9Y2X3 529 aaKnown RBP27.41■■□□□ 1.98
ARHGEF40-204ENST00000555038 MAP2P11137 1827 aaKnown RBP27.41■■□□□ 1.98
ARHGEF40-204ENST00000555038 LRRC7Q96NW7 1537 aa27.41■■□□□ 1.98
ARHGEF40-204ENST00000555038 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
ARHGEF40-204ENST00000555038 NEFMP07197 916 aa27.39■■□□□ 1.98
ARHGEF40-204ENST00000555038 TOPAZ1Q8N9V7 1692 aa27.39■■□□□ 1.97
ARHGEF40-204ENST00000555038 EID1Q9Y6B2 187 aa27.37■■□□□ 1.97
ARHGEF40-204ENST00000555038 RIPK4P57078 832 aa27.37■■□□□ 1.97
ARHGEF40-204ENST00000555038 COG3Q96JB2 828 aa27.37■■□□□ 1.97
ARHGEF40-204ENST00000555038 RSPH6AQ9H0K4 717 aa27.37■■□□□ 1.97
ARHGEF40-204ENST00000555038 FRAT1Q92837 279 aaPredicted RBP27.36■■□□□ 1.97
ARHGEF40-204ENST00000555038 DIP2AQ14689 1571 aa27.36■■□□□ 1.97
ARHGEF40-204ENST00000555038 PANK1Q8TE04 598 aa27.35■■□□□ 1.97
ARHGEF40-204ENST00000555038 FER1L4A9Z1Z3 1794 aa27.35■■□□□ 1.97
ARHGEF40-204ENST00000555038 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF40-204ENST00000555038 LTKP29376 864 aa27.35■■□□□ 1.97
ARHGEF40-204ENST00000555038 COG6Q9Y2V7 657 aa27.35■■□□□ 1.97
ARHGEF40-204ENST00000555038 NME9Q86XW9 330 aa27.34■■□□□ 1.97
ARHGEF40-204ENST00000555038 NRKQ7Z2Y5 1582 aa27.34■■□□□ 1.97
ARHGEF40-204ENST00000555038 PMFBP1Q8TBY8 1022 aa27.33■■□□□ 1.97
ARHGEF40-204ENST00000555038 PRR36Q9H6K5 1346 aa27.33■■□□□ 1.97
ARHGEF40-204ENST00000555038 PTCH1Q13635 1447 aa27.32■■□□□ 1.96
ARHGEF40-204ENST00000555038 PLEKHG3A1L390 1219 aa27.32■■□□□ 1.96
ARHGEF40-204ENST00000555038 ZKSCAN2Q63HK3 967 aa27.32■■□□□ 1.96
ARHGEF40-204ENST00000555038 IL13P35225 146 aa27.31■■□□□ 1.96
ARHGEF40-204ENST00000555038 CALD1Q05682 793 aaKnown RBP27.31■■□□□ 1.96
ARHGEF40-204ENST00000555038 TBX22Q9Y458 520 aa27.31■■□□□ 1.96
ARHGEF40-204ENST00000555038 PRKAR2BP31323 418 aa27.3■■□□□ 1.96
ARHGEF40-204ENST00000555038 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
ARHGEF40-204ENST00000555038 FAM161AQ3B820 660 aa27.3■■□□□ 1.96
ARHGEF40-204ENST00000555038 ZNF428Q96B54 188 aa27.3■■□□□ 1.96
ARHGEF40-204ENST00000555038 ZBTB47Q9UFB7 747 aaPredicted RBP27.3■■□□□ 1.96
ARHGEF40-204ENST00000555038 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
ARHGEF40-204ENST00000555038 NFE2L2Q16236 605 aa27.28■■□□□ 1.96
ARHGEF40-204ENST00000555038 TSR2Q969E8 191 aaKnown RBP27.28■■□□□ 1.96
ARHGEF40-204ENST00000555038 PTPRUQ92729 1446 aa27.28■■□□□ 1.96
ARHGEF40-204ENST00000555038 EMILIN1Q9Y6C2 1016 aa27.27■■□□□ 1.96
ARHGEF40-204ENST00000555038 THEMISQ8N1K5 641 aaPredicted RBP27.26■■□□□ 1.95
ARHGEF40-204ENST00000555038 IGHDP01880 384 aa27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 CEBPAP49715 358 aaPredicted RBP27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 MVPQ14764 893 aaKnown RBP27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 SMC4Q9NTJ3 1288 aa27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 RLBP1P12271 317 aa27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 ALDH1L2Q3SY69 923 aa27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 SKAP1Q86WV1 359 aa27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 DZIP1LQ8IYY4 767 aaKnown RBP27.25■■□□□ 1.95
ARHGEF40-204ENST00000555038 TTC21BQ7Z4L5 1316 aa27.24■■□□□ 1.95
ARHGEF40-204ENST00000555038 BCL2L13Q9BXK5 485 aa27.24■■□□□ 1.95
ARHGEF40-204ENST00000555038 OVOS2A0A0J9YW53 1432 aa27.24■■□□□ 1.95
ARHGEF40-204ENST00000555038 USP6P35125 1406 aa27.24■■□□□ 1.95
ARHGEF40-204ENST00000555038 OVOS2Q6IE36 1432 aa27.24■■□□□ 1.95
ARHGEF40-204ENST00000555038 NCKAP5LQ9HCH0 1330 aa27.23■■□□□ 1.95
ARHGEF40-204ENST00000555038 LMOD3Q0VAK6 560 aa27.23■■□□□ 1.95
ARHGEF40-204ENST00000555038 KIF16BQ96L93 1317 aa27.23■■□□□ 1.95
ARHGEF40-204ENST00000555038 NALCNQ8IZF0 1738 aa27.23■■□□□ 1.95
ARHGEF40-204ENST00000555038 FTSJ3Q8IY81 847 aaKnown RBP27.22■■□□□ 1.95
ARHGEF40-204ENST00000555038 DDRGK1Q96HY6 314 aa27.22■■□□□ 1.95
ARHGEF40-204ENST00000555038 ACEP12821 1306 aa27.21■■□□□ 1.95
ARHGEF40-204ENST00000555038 FBLN1P23142 703 aa27.21■■□□□ 1.95
ARHGEF40-204ENST00000555038 ZRANB1Q9UGI0 708 aa27.21■■□□□ 1.95
ARHGEF40-204ENST00000555038 BRPF1P55201 1214 aaPredicted RBP27.2■■□□□ 1.95
ARHGEF40-204ENST00000555038 SSH1Q8WYL5 1049 aa27.2■■□□□ 1.95
ARHGEF40-204ENST00000555038 RIMS1Q86UR5 1692 aaKnown RBP27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms