RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NRG2O14511 850 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-213ENST00000554776 GFRA3O60609 400 aa6.67□□□□□ -1.34
SCFD1-213ENST00000554776 SH3BP2P78314 561 aa6.67□□□□□ -1.34
SCFD1-213ENST00000554776 LAPTM4AQ15012 233 aa6.67□□□□□ -1.34
SCFD1-213ENST00000554776 ZNF511Q8NB15 262 aa6.67□□□□□ -1.34
SCFD1-213ENST00000554776 BAP1Q92560 729 aa6.67□□□□□ -1.34
SCFD1-213ENST00000554776 TNFRSF10AO00220 468 aa6.66□□□□□ -1.34
SCFD1-213ENST00000554776 FOXC1Q12948 553 aa6.66□□□□□ -1.34
SCFD1-213ENST00000554776 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
SCFD1-213ENST00000554776 RC3H1Q5TC82 1133 aaKnown RBP6.66□□□□□ -1.34
SCFD1-213ENST00000554776 BANK1Q8NDB2 785 aa6.66□□□□□ -1.34
SCFD1-213ENST00000554776 ARMC2Q8NEN0 867 aa6.66□□□□□ -1.34
SCFD1-213ENST00000554776 HMX1Q9NP08 348 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-213ENST00000554776 NR6A1Q15406 480 aa6.65□□□□□ -1.34
SCFD1-213ENST00000554776 SOCS7O14512 581 aa6.64□□□□□ -1.35
SCFD1-213ENST00000554776 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
SCFD1-213ENST00000554776 MRGPRX2Q96LB1 330 aa6.64□□□□□ -1.35
SCFD1-213ENST00000554776 TOR4AQ9NXH8 423 aa6.64□□□□□ -1.35
SCFD1-213ENST00000554776 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
SCFD1-213ENST00000554776 GPKOWQ92917 476 aaPredicted RBP eCLIP6.63□□□□□ -1.35
SCFD1-213ENST00000554776 TRIM34Q9BYJ4 488 aa6.63□□□□□ -1.35
SCFD1-213ENST00000554776 FKBPLQ9UIM3 349 aa6.63□□□□□ -1.35
SCFD1-213ENST00000554776 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
SCFD1-213ENST00000554776 SIAH2O43255 324 aa6.62□□□□□ -1.35
SCFD1-213ENST00000554776 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
SCFD1-213ENST00000554776 CYP4X1Q8N118 509 aa6.62□□□□□ -1.35
SCFD1-213ENST00000554776 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
SCFD1-213ENST00000554776 SNIP1Q8TAD8 396 aaKnown RBP6.62□□□□□ -1.35
SCFD1-213ENST00000554776 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
SCFD1-213ENST00000554776 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-213ENST00000554776 VARSP26640 1264 aaKnown RBP6.61□□□□□ -1.35
SCFD1-213ENST00000554776 C4orf48Q5BLP8 95 aa6.61□□□□□ -1.35
SCFD1-213ENST00000554776 SH3RF1Q7Z6J0 888 aa6.61□□□□□ -1.35
SCFD1-213ENST00000554776 BPHLQ86WA6 291 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-213ENST00000554776 MTMR14Q8NCE2 650 aa6.61□□□□□ -1.35
SCFD1-213ENST00000554776 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
SCFD1-213ENST00000554776 PDXDC2PQ6P474 469 aa6.6□□□□□ -1.35
SCFD1-213ENST00000554776 TTC24A2A3L6 582 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-213ENST00000554776 DGAT1O75907 488 aa6.59□□□□□ -1.35
SCFD1-213ENST00000554776 MPNDQ8N594 471 aa6.59□□□□□ -1.35
SCFD1-213ENST00000554776 PNMA1Q8ND90 353 aa6.59□□□□□ -1.35
SCFD1-213ENST00000554776 C1QTNF2Q9BXJ5 285 aa6.59□□□□□ -1.35
SCFD1-213ENST00000554776 FAM187AA6NFU0 413 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 SMPD1P17405 629 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 AGERQ15109 404 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 Q6ZNB5 142 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 GPSM3Q9Y4H4 160 aa6.58□□□□□ -1.36
SCFD1-213ENST00000554776 J3QL48 77 aa6.57□□□□□ -1.36
SCFD1-213ENST00000554776 APBB1O00213 710 aa6.57□□□□□ -1.36
SCFD1-213ENST00000554776 PKDCCQ504Y2 493 aa6.57□□□□□ -1.36
SCFD1-213ENST00000554776 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
SCFD1-213ENST00000554776 TLL2Q9Y6L7 1015 aa6.57□□□□□ -1.36
SCFD1-213ENST00000554776 LCE2BO14633 110 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 GPR37L1O60883 481 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 AVPP01185 164 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 PTK2Q05397 1052 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 MCM6Q14566 821 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 TRMT44Q8IYL2 757 aaKnown RBP6.56□□□□□ -1.36
SCFD1-213ENST00000554776 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 ARHGAP9Q9BRR9 750 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 NDUFB9Q9Y6M9 179 aa6.56□□□□□ -1.36
SCFD1-213ENST00000554776 MAGEB6P1A0A0J9YX57 407 aa6.55□□□□□ -1.36
SCFD1-213ENST00000554776 ERFEQ4G0M1 354 aa6.55□□□□□ -1.36
SCFD1-213ENST00000554776 CARD14Q9BXL6 1004 aa6.55□□□□□ -1.36
SCFD1-213ENST00000554776 MYT1Q01538 1121 aa6.54□□□□□ -1.36
SCFD1-213ENST00000554776 TRAF7Q6Q0C0 670 aa6.54□□□□□ -1.36
SCFD1-213ENST00000554776 MAP4K5Q9Y4K4 846 aa6.54□□□□□ -1.36
SCFD1-213ENST00000554776 ADH1CP00326 375 aa6.53□□□□□ -1.36
SCFD1-213ENST00000554776 ZBTB33Q86T24 672 aa6.53□□□□□ -1.36
SCFD1-213ENST00000554776 CRIPAKQ8N1N5 446 aa6.53□□□□□ -1.36
SCFD1-213ENST00000554776 ADAM32Q8TC27 787 aa6.53□□□□□ -1.36
SCFD1-213ENST00000554776 WASF2Q9Y6W5 498 aa6.53□□□□□ -1.36
SCFD1-213ENST00000554776 ZBBXA8MT70 800 aa6.52□□□□□ -1.37
SCFD1-213ENST00000554776 SMCPP49901 116 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-213ENST00000554776 HPS1Q92902 700 aa6.52□□□□□ -1.37
SCFD1-213ENST00000554776 PRM3Q9NNZ6 103 aa6.52□□□□□ -1.37
SCFD1-213ENST00000554776 TBC1D2BQ9UPU7 963 aa6.52□□□□□ -1.37
SCFD1-213ENST00000554776 GTF3C3Q9Y5Q9 886 aa6.52□□□□□ -1.37
SCFD1-213ENST00000554776 FBXO45P0C2W1 286 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 GRM5P41594 1212 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 FLIIQ13045 1269 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 CTC1Q2NKJ3 1217 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 SLC10A4Q96EP9 437 aa6.51□□□□□ -1.37
SCFD1-213ENST00000554776 CDV3Q9UKY7 258 aaKnown RBP6.51□□□□□ -1.37
SCFD1-213ENST00000554776 NR1H3Q13133 447 aa6.5□□□□□ -1.37
SCFD1-213ENST00000554776 NR5A1Q13285 461 aa6.5□□□□□ -1.37
SCFD1-213ENST00000554776 NNTQ13423 1086 aa6.5□□□□□ -1.37
SCFD1-213ENST00000554776 VASH1Q7L8A9 365 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-213ENST00000554776 AAASQ9NRG9 546 aa6.5□□□□□ -1.37
SCFD1-213ENST00000554776 ST8SIA5O15466 376 aa6.49□□□□□ -1.37
SCFD1-213ENST00000554776 NR3C2P08235 984 aa6.49□□□□□ -1.37
SCFD1-213ENST00000554776 FSHRP23945 695 aa6.49□□□□□ -1.37
SCFD1-213ENST00000554776 IRF5Q13568 498 aa6.49□□□□□ -1.37
SCFD1-213ENST00000554776 GDPD2Q9HCC8 539 aa6.49□□□□□ -1.37
SCFD1-213ENST00000554776 AXIN1O15169 862 aa6.48□□□□□ -1.37
SCFD1-213ENST00000554776 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-213ENST00000554776 KLF16Q9BXK1 252 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms