RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 NUDT16Q96DE0 195 aaKnown RBP23.36■■□□□ 1.33
MEG3-224ENST00000554639 ITSN1Q15811 1721 aa23.35■■□□□ 1.33
MEG3-224ENST00000554639 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
MEG3-224ENST00000554639 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
MEG3-224ENST00000554639 SPINK5Q9NQ38 1064 aaPredicted RBP23.35■■□□□ 1.33
MEG3-224ENST00000554639 PLIN1O60240 522 aa23.34■■□□□ 1.33
MEG3-224ENST00000554639 TBX22Q9Y458 520 aa23.34■■□□□ 1.33
MEG3-224ENST00000554639 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
MEG3-224ENST00000554639 THEMISQ8N1K5 641 aaPredicted RBP23.33■■□□□ 1.33
MEG3-224ENST00000554639 MYH16Q9H6N6 1097 aa23.33■■□□□ 1.32
MEG3-224ENST00000554639 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
MEG3-224ENST00000554639 LTKP29376 864 aa23.32■■□□□ 1.32
MEG3-224ENST00000554639 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
MEG3-224ENST00000554639 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
MEG3-224ENST00000554639 PTCH1Q13635 1447 aa23.31■■□□□ 1.32
MEG3-224ENST00000554639 TOPAZ1Q8N9V7 1692 aa23.31■■□□□ 1.32
MEG3-224ENST00000554639 TCERG1O14776 1098 aaKnown RBP23.3■■□□□ 1.32
MEG3-224ENST00000554639 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
MEG3-224ENST00000554639 IL16Q14005 1332 aa23.29■■□□□ 1.32
MEG3-224ENST00000554639 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
MEG3-224ENST00000554639 MAPK8IP3Q9UPT6 1336 aa23.29■■□□□ 1.32
MEG3-224ENST00000554639 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
MEG3-224ENST00000554639 FCHSD2O94868 740 aa23.28■■□□□ 1.32
MEG3-224ENST00000554639 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
MEG3-224ENST00000554639 AAMPQ13685 434 aa23.28■■□□□ 1.32
MEG3-224ENST00000554639 MS4A1P11836 297 aa23.27■■□□□ 1.32
MEG3-224ENST00000554639 CEBPAP49715 358 aaPredicted RBP23.27■■□□□ 1.32
MEG3-224ENST00000554639 PIK3R4Q99570 1358 aa23.26■■□□□ 1.31
MEG3-224ENST00000554639 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
MEG3-224ENST00000554639 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
MEG3-224ENST00000554639 POLKQ9UBT6 870 aa23.26■■□□□ 1.31
MEG3-224ENST00000554639 MAP2P11137 1827 aaKnown RBP23.26■■□□□ 1.31
MEG3-224ENST00000554639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
MEG3-224ENST00000554639 TMPOP42166 694 aaKnown RBP23.25■■□□□ 1.31
MEG3-224ENST00000554639 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
MEG3-224ENST00000554639 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
MEG3-224ENST00000554639 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
MEG3-224ENST00000554639 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
MEG3-224ENST00000554639 COG3Q96JB2 828 aa23.24■■□□□ 1.31
MEG3-224ENST00000554639 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
MEG3-224ENST00000554639 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
MEG3-224ENST00000554639 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
MEG3-224ENST00000554639 PRR36Q9H6K5 1346 aa23.22■■□□□ 1.31
MEG3-224ENST00000554639 NEFMP07197 916 aa23.22■■□□□ 1.31
MEG3-224ENST00000554639 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
MEG3-224ENST00000554639 XRN1Q8IZH2 1706 aaKnown RBP23.21■■□□□ 1.31
MEG3-224ENST00000554639 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.31
MEG3-224ENST00000554639 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
MEG3-224ENST00000554639 KDM2BQ8NHM5 1336 aa23.2■■□□□ 1.3
MEG3-224ENST00000554639 BCAR3O75815 825 aa23.19■■□□□ 1.3
MEG3-224ENST00000554639 NME9Q86XW9 330 aa23.19■■□□□ 1.3
MEG3-224ENST00000554639 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
MEG3-224ENST00000554639 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
MEG3-224ENST00000554639 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
MEG3-224ENST00000554639 SLC26A8Q96RN1 970 aa23.16■■□□□ 1.3
MEG3-224ENST00000554639 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
MEG3-224ENST00000554639 ZNF142P52746 1687 aaPredicted RBP23.16■■□□□ 1.3
MEG3-224ENST00000554639 USP6P35125 1406 aa23.16■■□□□ 1.3
MEG3-224ENST00000554639 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
MEG3-224ENST00000554639 TTC21AQ8NDW8 1320 aa23.15■■□□□ 1.3
MEG3-224ENST00000554639 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
MEG3-224ENST00000554639 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
MEG3-224ENST00000554639 ANKARQ7Z5J8 1434 aa23.15■■□□□ 1.3
MEG3-224ENST00000554639 IL13P35225 146 aa23.14■■□□□ 1.3
MEG3-224ENST00000554639 OVOS2A0A0J9YW53 1432 aa23.14■■□□□ 1.29
MEG3-224ENST00000554639 OVOS2Q6IE36 1432 aa23.14■■□□□ 1.29
MEG3-224ENST00000554639 ACEP12821 1306 aa23.14■■□□□ 1.29
MEG3-224ENST00000554639 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
MEG3-224ENST00000554639 RIPK4P57078 832 aa23.13■■□□□ 1.29
MEG3-224ENST00000554639 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
MEG3-224ENST00000554639 ZNF428Q96B54 188 aa23.11■■□□□ 1.29
MEG3-224ENST00000554639 USP31Q70CQ4 1352 aa23.11■■□□□ 1.29
MEG3-224ENST00000554639 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
MEG3-224ENST00000554639 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
MEG3-224ENST00000554639 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
MEG3-224ENST00000554639 EMILIN1Q9Y6C2 1016 aa23.1■■□□□ 1.29
MEG3-224ENST00000554639 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
MEG3-224ENST00000554639 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
MEG3-224ENST00000554639 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
MEG3-224ENST00000554639 CLUAP1Q96AJ1 413 aa23.06■■□□□ 1.28
MEG3-224ENST00000554639 ZRANB1Q9UGI0 708 aa23.05■■□□□ 1.28
MEG3-224ENST00000554639 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
MEG3-224ENST00000554639 FMN2Q9NZ56 1722 aa23.05■■□□□ 1.28
MEG3-224ENST00000554639 ANKLE2Q86XL3 938 aa23.05■■□□□ 1.28
MEG3-224ENST00000554639 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
MEG3-224ENST00000554639 EXOSC9Q06265 439 aaKnown RBP23.03■■□□□ 1.28
MEG3-224ENST00000554639 ALDH1L2Q3SY69 923 aa23.03■■□□□ 1.28
MEG3-224ENST00000554639 FRAT1Q92837 279 aaPredicted RBP23.03■■□□□ 1.28
MEG3-224ENST00000554639 BACH2Q9BYV9 841 aa23.03■■□□□ 1.28
MEG3-224ENST00000554639 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
MEG3-224ENST00000554639 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
MEG3-224ENST00000554639 PDE4AP27815 886 aa23.02■■□□□ 1.28
MEG3-224ENST00000554639 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
MEG3-224ENST00000554639 ANP32AP39687 249 aaKnown RBP23.02■■□□□ 1.28
MEG3-224ENST00000554639 BRPF1P55201 1214 aaPredicted RBP23.02■■□□□ 1.28
MEG3-224ENST00000554639 FBLN1P23142 703 aa23.01■■□□□ 1.27
MEG3-224ENST00000554639 GNAI1P63096 354 aa23■■□□□ 1.27
MEG3-224ENST00000554639 PANK1Q8TE04 598 aa23■■□□□ 1.27
MEG3-224ENST00000554639 TSR2Q969E8 191 aaKnown RBP23■■□□□ 1.27
MEG3-224ENST00000554639 IFT57Q9NWB7 429 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms