RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SPEF2Q9C093 1822 aa4.72□□□□□ -1.65
SEC23A-207ENST00000554615 CT47B1P0C2W7 299 aaPredicted RBP4.72□□□□□ -1.65
SEC23A-207ENST00000554615 EDC4Q6P2E9 1401 aaKnown RBP4.72□□□□□ -1.65
SEC23A-207ENST00000554615 MAPK8IP2Q13387 824 aaPredicted RBP4.72□□□□□ -1.65
SEC23A-207ENST00000554615 RBM19Q9Y4C8 960 aaKnown RBP4.72□□□□□ -1.65
SEC23A-207ENST00000554615 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
SEC23A-207ENST00000554615 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.65
SEC23A-207ENST00000554615 PLEKHG1Q9ULL1 1385 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 ST20-MTHFSA0A0A6YYL1 179 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 SLFN5Q08AF3 891 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 EHMT2Q96KQ7 1210 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 USP19O94966 1318 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 CENPJQ9HC77 1338 aaPredicted RBP4.71□□□□□ -1.66
SEC23A-207ENST00000554615 RGPD5Q99666 1765 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 ARFGEF2Q9Y6D5 1785 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 PPP2R1AP30153 589 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 DDIT3P35638 169 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 CARD14Q9BXL6 1004 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 ECM29Q5VYK3 1845 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 KIF16BQ96L93 1317 aa4.71□□□□□ -1.66
SEC23A-207ENST00000554615 DLEC1Q9Y238 1755 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 ARHGEF10O15013 1369 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 TSPY4P0CV99 314 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 TSPY10P0CW01 314 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 CFAP65Q6ZU64 1925 aaKnown RBP4.7□□□□□ -1.66
SEC23A-207ENST00000554615 NBPF1Q3BBV0 1214 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 DOCK2Q92608 1830 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 LRP5O75197 1615 aa4.7□□□□□ -1.66
SEC23A-207ENST00000554615 NWD2Q9ULI1 1742 aa4.69□□□□□ -1.66
SEC23A-207ENST00000554615 BCORQ6W2J9 1755 aa4.69□□□□□ -1.66
SEC23A-207ENST00000554615 KDRP35968 1356 aa4.69□□□□□ -1.66
SEC23A-207ENST00000554615 RNF216Q9NWF9 866 aaPredicted RBP4.69□□□□□ -1.66
SEC23A-207ENST00000554615 NRAPQ86VF7 1730 aa4.69□□□□□ -1.66
SEC23A-207ENST00000554615 ATAD2Q6PL18 1390 aa4.69□□□□□ -1.66
SEC23A-207ENST00000554615 TOGARAM1Q9Y4F4 1720 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 STRCQ7RTU9 1775 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 ADGRF5Q8IZF2 1346 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 CDCA8Q53HL2 280 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 ADGRL3Q9HAR2 1447 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 WDR63Q8IWG1 891 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 CHIC2Q9UKJ5 165 aa4.68□□□□□ -1.66
SEC23A-207ENST00000554615 ZNF646O15015 1829 aaPredicted RBP4.67□□□□□ -1.66
SEC23A-207ENST00000554615 A0A1W2PP64 1363 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 TMF1P82094 1093 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 C4AP0C0L4 1744 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 C4BP0C0L5 1744 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 NSD3Q9BZ95 1437 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 CGNL1Q0VF96 1302 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 TCERG1O14776 1098 aaKnown RBP4.67□□□□□ -1.66
SEC23A-207ENST00000554615 KLHL34Q8N239 644 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 BACH2Q9BYV9 841 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 SLC52A1Q9NWF4 448 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 COL5A3P25940 1745 aaPredicted RBP4.67□□□□□ -1.66
SEC23A-207ENST00000554615 TIAM2Q8IVF5 1701 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 CARD11Q9BXL7 1154 aa4.67□□□□□ -1.66
SEC23A-207ENST00000554615 ZNF853P0CG23 659 aa4.66□□□□□ -1.66
SEC23A-207ENST00000554615 PDE3AQ14432 1141 aa4.66□□□□□ -1.66
SEC23A-207ENST00000554615 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
SEC23A-207ENST00000554615 CRB1P82279 1406 aa4.66□□□□□ -1.66
SEC23A-207ENST00000554615 C8orf34Q49A92 452 aa4.65□□□□□ -1.67
SEC23A-207ENST00000554615 MYH7P12883 1935 aa4.65□□□□□ -1.67
SEC23A-207ENST00000554615 AFDNP55196 1824 aaKnown RBP4.65□□□□□ -1.67
SEC23A-207ENST00000554615 ATP10DQ9P241 1426 aa4.65□□□□□ -1.67
SEC23A-207ENST00000554615 IL27Q8NEV9 243 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 FKBP8Q14318 412 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 USP35Q9P2H5 1018 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 SBNO1A3KN83 1393 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 KIAA0232Q92628 1395 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 HEG1Q9ULI3 1381 aa4.64□□□□□ -1.67
SEC23A-207ENST00000554615 COL24A1Q17RW2 1714 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 DCAF11Q8TEB1 546 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 ZNF428Q96B54 188 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 DCCP43146 1447 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 SOS1Q07889 1333 aaPredicted RBP4.63□□□□□ -1.67
SEC23A-207ENST00000554615 COL15A1P39059 1388 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 PANK3Q9H999 370 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 USP6P35125 1406 aa4.63□□□□□ -1.67
SEC23A-207ENST00000554615 CENPQQ7L2Z9 268 aaPredicted RBP4.62□□□□□ -1.67
SEC23A-207ENST00000554615 ANTXR1Q9H6X2 564 aa4.62□□□□□ -1.67
SEC23A-207ENST00000554615 MRS2Q9HD23 443 aa4.62□□□□□ -1.67
SEC23A-207ENST00000554615 HDAC1Q13547 482 aaPredicted RBP4.62□□□□□ -1.67
SEC23A-207ENST00000554615 ITGB4P16144 1822 aa4.62□□□□□ -1.67
SEC23A-207ENST00000554615 TNRC6CQ9HCJ0 1690 aaKnown RBP4.62□□□□□ -1.67
SEC23A-207ENST00000554615 TMEM2Q9UHN6 1383 aa4.62□□□□□ -1.67
SEC23A-207ENST00000554615 AFAP1Q8N556 730 aa4.62□□□□□ -1.67
SEC23A-207ENST00000554615 JCADQ9P266 1359 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 MYH3P11055 1940 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 E9PSI1 815 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 ITGAEP38570 1179 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 TRIM52Q96A61 297 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 ZNF692Q9BU19 519 aaPredicted RBP4.61□□□□□ -1.67
SEC23A-207ENST00000554615 RCAN3Q9UKA8 241 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 NHSQ6T4R5 1651 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 MAST2Q6P0Q8 1798 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 SETD1BQ9UPS6 1966 aaKnown RBP4.61□□□□□ -1.67
SEC23A-207ENST00000554615 ARHGAP45Q92619 1136 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 ABCC4O15439 1325 aa4.61□□□□□ -1.67
SEC23A-207ENST00000554615 HNRNPUQ00839 825 aaKnown RBP eCLIP4.61□□□□□ -1.67
SEC23A-207ENST00000554615 SP7Q8TDD2 431 aaPredicted RBP4.61□□□□□ -1.67
SEC23A-207ENST00000554615 FOCADQ5VW36 1801 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms