RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 RNF19BQ6ZMZ0 732 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 CARNS1A5YM72 827 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 FAM205CA6NFA0 338 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 SOX11P35716 441 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 Q3C1V9 767 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 BLOC1S3Q6QNY0 202 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
PPP4R3A-204ENST00000554574 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
PPP4R3A-204ENST00000554574 RUSC2Q8N2Y8 1516 aa7.41□□□□□ -1.22
PPP4R3A-204ENST00000554574 KIF21BO75037 1637 aa7.41□□□□□ -1.22
PPP4R3A-204ENST00000554574 TK2O00142 265 aa7.4□□□□□ -1.22
PPP4R3A-204ENST00000554574 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
PPP4R3A-204ENST00000554574 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.4□□□□□ -1.22
PPP4R3A-204ENST00000554574 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
PPP4R3A-204ENST00000554574 MAFBQ9Y5Q3 323 aaPredicted RBP7.4□□□□□ -1.22
PPP4R3A-204ENST00000554574 CSB-PGBD3P0DP91 1061 aa7.4□□□□□ -1.23
PPP4R3A-204ENST00000554574 PDE4CQ08493 712 aa7.4□□□□□ -1.23
PPP4R3A-204ENST00000554574 SEMA3FQ13275 785 aa7.4□□□□□ -1.23
PPP4R3A-204ENST00000554574 CDAN1Q8IWY9 1227 aa7.4□□□□□ -1.23
PPP4R3A-204ENST00000554574 POTEB3A0JP26 581 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 CDCA8Q53HL2 280 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 POTEBQ6S5H4 581 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 TBC1D9Q6ZT07 1266 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 FANCD2Q9BXW9 1451 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
PPP4R3A-204ENST00000554574 NESP48681 1621 aa7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 NR1H3Q13133 447 aa7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 BRICD5Q6PL45 260 aa7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 ADGRD1Q6QNK2 874 aa7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 PNMA1Q8ND90 353 aa7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
PPP4R3A-204ENST00000554574 APLP1P51693 650 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 EIF4G2P78344 907 aaKnown RBP eCLIP7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 TMCO4Q5TGY1 634 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 MAP10Q9P2G4 905 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 BRD1O95696 1058 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 F12P00748 615 aaPredicted RBP7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
PPP4R3A-204ENST00000554574 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 CEP164Q9UPV0 1460 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 KIF21AQ7Z4S6 1674 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 HRO43593 1189 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 ATP9BO43861 1147 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 ATG7O95352 703 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 LSM11P83369 360 aaKnown RBP eCLIP7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 THAP11Q96EK4 314 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 FKBPLQ9UIM3 349 aa7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 SALL2Q9Y467 1007 aaPredicted RBP7.36□□□□□ -1.23
PPP4R3A-204ENST00000554574 ZBBXA8MT70 800 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 PIK3CDO00329 1044 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 SCUBE3Q8IX30 993 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 HPS5Q9UPZ3 1129 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 BCAMP50895 628 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 ANKK1Q8NFD2 765 aa7.35□□□□□ -1.23
PPP4R3A-204ENST00000554574 FGD5Q6ZNL6 1462 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 TNIKQ9UKE5 1360 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 SOWAHBA6NEL2 793 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 JUNDP17535 347 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 PPP4CP60510 307 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 KCNA1Q09470 495 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 ERICH3Q5RHP9 1530 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 PDS5BQ9NTI5 1447 aa7.34□□□□□ -1.23
PPP4R3A-204ENST00000554574 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 PTPRNQ16849 979 aa7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 RGS22Q8NE09 1264 aa7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 PCDHB3Q9Y5E6 796 aa7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 TOPBP1Q92547 1522 aa7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 KIF27Q86VH2 1401 aa7.33□□□□□ -1.24
PPP4R3A-204ENST00000554574 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
PPP4R3A-204ENST00000554574 NR1I2O75469 434 aa7.32□□□□□ -1.24
PPP4R3A-204ENST00000554574 KANK4Q5T7N3 995 aaPredicted RBP7.32□□□□□ -1.24
PPP4R3A-204ENST00000554574 MTMR7Q9Y216 660 aa7.32□□□□□ -1.24
PPP4R3A-204ENST00000554574 WDR97A6NE52 1622 aa7.32□□□□□ -1.24
PPP4R3A-204ENST00000554574 TSR3Q9UJK0 312 aaKnown RBP7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 ZC3H4Q9UPT8 1303 aaKnown RBP7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 CEP162Q5TB80 1403 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 GOLGA8CPA6NN73 597 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 CTHP32929 405 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 FAM174AQ8TBP5 190 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 VRTNQ9H8Y1 702 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 PRXQ9BXM0 1461 aa7.31□□□□□ -1.24
PPP4R3A-204ENST00000554574 URB2Q14146 1524 aaKnown RBP7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 RAPGEF2Q9Y4G8 1499 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 USP17L3A6NCW0 530 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 USP17L4A6NCW7 530 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 USP17L2Q6R6M4 530 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 USP17L1Q7RTZ2 530 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 ZMIZ1Q9ULJ6 1067 aa7.3□□□□□ -1.24
PPP4R3A-204ENST00000554574 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 SKIP12755 728 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
PPP4R3A-204ENST00000554574 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms