RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
HNRNPC-212ENST00000554539 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-212ENST00000554539 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-212ENST00000554539 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
HNRNPC-212ENST00000554539 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
HNRNPC-212ENST00000554539 YY1P25490 414 aa12.67□□□□□ -0.38
HNRNPC-212ENST00000554539 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
HNRNPC-212ENST00000554539 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-212ENST00000554539 KNDC1Q76NI1 1749 aa12.66□□□□□ -0.38
HNRNPC-212ENST00000554539 ABCA3Q99758 1704 aa12.66□□□□□ -0.38
HNRNPC-212ENST00000554539 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
HNRNPC-212ENST00000554539 EVA1CP58658 441 aa12.65□□□□□ -0.38
HNRNPC-212ENST00000554539 NRAPQ86VF7 1730 aa12.65□□□□□ -0.38
HNRNPC-212ENST00000554539 SPATA31A1Q5TZJ5 1347 aa12.64□□□□□ -0.39
HNRNPC-212ENST00000554539 WASLO00401 505 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-212ENST00000554539 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
HNRNPC-212ENST00000554539 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
HNRNPC-212ENST00000554539 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
HNRNPC-212ENST00000554539 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
HNRNPC-212ENST00000554539 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-212ENST00000554539 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-212ENST00000554539 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-212ENST00000554539 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-212ENST00000554539 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
HNRNPC-212ENST00000554539 TRPM3Q9HCF6 1732 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-212ENST00000554539 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
HNRNPC-212ENST00000554539 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
HNRNPC-212ENST00000554539 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
HNRNPC-212ENST00000554539 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
HNRNPC-212ENST00000554539 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-212ENST00000554539 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
HNRNPC-212ENST00000554539 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
HNRNPC-212ENST00000554539 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
HNRNPC-212ENST00000554539 PDGFDQ9GZP0 370 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-212ENST00000554539 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
HNRNPC-212ENST00000554539 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
HNRNPC-212ENST00000554539 KCNQ2O43526 872 aa12.57□□□□□ -0.4
HNRNPC-212ENST00000554539 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
HNRNPC-212ENST00000554539 ABTB2Q8N961 1025 aa12.56□□□□□ -0.4
HNRNPC-212ENST00000554539 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
HNRNPC-212ENST00000554539 ACEP12821 1306 aa12.56□□□□□ -0.4
HNRNPC-212ENST00000554539 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
HNRNPC-212ENST00000554539 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 ADGRB1O14514 1584 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 ADGRB2O60241 1585 aa12.54□□□□□ -0.4
HNRNPC-212ENST00000554539 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
HNRNPC-212ENST00000554539 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-212ENST00000554539 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
HNRNPC-212ENST00000554539 CRYBG1Q9Y4K1 1723 aa12.52□□□□□ -0.41
HNRNPC-212ENST00000554539 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-212ENST00000554539 GCP02774 474 aa12.5□□□□□ -0.41
HNRNPC-212ENST00000554539 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-212ENST00000554539 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
HNRNPC-212ENST00000554539 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
HNRNPC-212ENST00000554539 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
HNRNPC-212ENST00000554539 ATP7BP35670 1465 aa12.49□□□□□ -0.41
HNRNPC-212ENST00000554539 SOX12O15370 315 aa12.49□□□□□ -0.41
HNRNPC-212ENST00000554539 PROM2Q8N271 834 aa12.49□□□□□ -0.41
HNRNPC-212ENST00000554539 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
HNRNPC-212ENST00000554539 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
HNRNPC-212ENST00000554539 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-212ENST00000554539 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
HNRNPC-212ENST00000554539 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
HNRNPC-212ENST00000554539 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-212ENST00000554539 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
HNRNPC-212ENST00000554539 DDB1Q16531 1140 aa12.47□□□□□ -0.41
HNRNPC-212ENST00000554539 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
HNRNPC-212ENST00000554539 RREB1Q92766 1687 aa12.47□□□□□ -0.41
HNRNPC-212ENST00000554539 NLRP6P59044 892 aa12.46□□□□□ -0.41
HNRNPC-212ENST00000554539 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-212ENST00000554539 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-212ENST00000554539 AXIN2Q9Y2T1 843 aa12.46□□□□□ -0.41
HNRNPC-212ENST00000554539 POLR3AO14802 1390 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-212ENST00000554539 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-212ENST00000554539 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 USP19O94966 1318 aa12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 PLSCR1O15162 318 aa12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 PTGER2P43116 358 aa12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 FHDC1Q9C0D6 1143 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
HNRNPC-212ENST00000554539 CPDO75976 1380 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
HNRNPC-212ENST00000554539 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 CRB1P82279 1406 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 PPIP5K1Q6PFW1 1433 aa12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-212ENST00000554539 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms