RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TULP4Q9NRJ4 1543 aa20.36■□□□□ 0.85
SPTLC2-202ENST00000554365 WASLO00401 505 aaPredicted RBP20.35■□□□□ 0.85
SPTLC2-202ENST00000554365 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
SPTLC2-202ENST00000554365 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
SPTLC2-202ENST00000554365 NRAPQ86VF7 1730 aa20.34■□□□□ 0.85
SPTLC2-202ENST00000554365 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
SPTLC2-202ENST00000554365 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.84
SPTLC2-202ENST00000554365 BAG6P46379 1132 aa20.3■□□□□ 0.84
SPTLC2-202ENST00000554365 PRDM11Q9NQV5 511 aa20.29■□□□□ 0.84
SPTLC2-202ENST00000554365 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
SPTLC2-202ENST00000554365 STAC3Q96MF2 364 aa20.28■□□□□ 0.84
SPTLC2-202ENST00000554365 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
SPTLC2-202ENST00000554365 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
SPTLC2-202ENST00000554365 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.84
SPTLC2-202ENST00000554365 PSDA5PKW4 1024 aaPredicted RBP20.26■□□□□ 0.83
SPTLC2-202ENST00000554365 ARHGEF28Q8N1W1 1705 aaKnown RBP20.26■□□□□ 0.83
SPTLC2-202ENST00000554365 CRYBG1Q9Y4K1 1723 aa20.26■□□□□ 0.83
SPTLC2-202ENST00000554365 ATP7BP35670 1465 aa20.25■□□□□ 0.83
SPTLC2-202ENST00000554365 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
SPTLC2-202ENST00000554365 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
SPTLC2-202ENST00000554365 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
SPTLC2-202ENST00000554365 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
SPTLC2-202ENST00000554365 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
SPTLC2-202ENST00000554365 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
SPTLC2-202ENST00000554365 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
SPTLC2-202ENST00000554365 STRN4Q9NRL3 753 aa20.23■□□□□ 0.83
SPTLC2-202ENST00000554365 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
SPTLC2-202ENST00000554365 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
SPTLC2-202ENST00000554365 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
SPTLC2-202ENST00000554365 LRP5O75197 1615 aa20.2■□□□□ 0.82
SPTLC2-202ENST00000554365 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
SPTLC2-202ENST00000554365 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
SPTLC2-202ENST00000554365 ACEP12821 1306 aa20.19■□□□□ 0.82
SPTLC2-202ENST00000554365 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
SPTLC2-202ENST00000554365 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
SPTLC2-202ENST00000554365 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
SPTLC2-202ENST00000554365 EVA1CP58658 441 aa20.16■□□□□ 0.82
SPTLC2-202ENST00000554365 R3HDM1Q15032 1099 aaKnown RBP20.16■□□□□ 0.82
SPTLC2-202ENST00000554365 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
SPTLC2-202ENST00000554365 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
SPTLC2-202ENST00000554365 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
SPTLC2-202ENST00000554365 TOPAZ1Q8N9V7 1692 aa20.15■□□□□ 0.82
SPTLC2-202ENST00000554365 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
SPTLC2-202ENST00000554365 TRIM37O94972 964 aa20.14■□□□□ 0.81
SPTLC2-202ENST00000554365 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
SPTLC2-202ENST00000554365 DISP2A7MBM2 1401 aa20.13■□□□□ 0.81
SPTLC2-202ENST00000554365 PLEKHG3A1L390 1219 aa20.13■□□□□ 0.81
SPTLC2-202ENST00000554365 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
SPTLC2-202ENST00000554365 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
SPTLC2-202ENST00000554365 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
SPTLC2-202ENST00000554365 NRKQ7Z2Y5 1582 aa20.12■□□□□ 0.81
SPTLC2-202ENST00000554365 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
SPTLC2-202ENST00000554365 APBA3O96018 575 aa20.11■□□□□ 0.81
SPTLC2-202ENST00000554365 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
SPTLC2-202ENST00000554365 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
SPTLC2-202ENST00000554365 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
SPTLC2-202ENST00000554365 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
SPTLC2-202ENST00000554365 CAMTA1Q9Y6Y1 1673 aa20.1■□□□□ 0.81
SPTLC2-202ENST00000554365 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
SPTLC2-202ENST00000554365 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
SPTLC2-202ENST00000554365 PPIP5K1Q6PFW1 1433 aa20.09■□□□□ 0.81
SPTLC2-202ENST00000554365 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
SPTLC2-202ENST00000554365 CPDO75976 1380 aa20.08■□□□□ 0.8
SPTLC2-202ENST00000554365 USP19O94966 1318 aa20.07■□□□□ 0.8
SPTLC2-202ENST00000554365 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
SPTLC2-202ENST00000554365 TCP11L2Q8N4U5 519 aa20.07■□□□□ 0.8
SPTLC2-202ENST00000554365 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
SPTLC2-202ENST00000554365 ZBTB7CA1YPR0 619 aa20.06■□□□□ 0.8
SPTLC2-202ENST00000554365 GCP02774 474 aa20.06■□□□□ 0.8
SPTLC2-202ENST00000554365 LMO7Q8WWI1 1683 aa20.06■□□□□ 0.8
SPTLC2-202ENST00000554365 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
SPTLC2-202ENST00000554365 THRAP3Q9Y2W1 955 aaKnown RBP20.03■□□□□ 0.8
SPTLC2-202ENST00000554365 COL5A2P05997 1499 aaPredicted RBP20.01■□□□□ 0.79
SPTLC2-202ENST00000554365 NLRP6P59044 892 aa20.01■□□□□ 0.79
SPTLC2-202ENST00000554365 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
SPTLC2-202ENST00000554365 CABP1Q9NZU7 370 aa20.01■□□□□ 0.79
SPTLC2-202ENST00000554365 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
SPTLC2-202ENST00000554365 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
SPTLC2-202ENST00000554365 NBPF14Q5TI25 921 aa19.99■□□□□ 0.79
SPTLC2-202ENST00000554365 RREB1Q92766 1687 aa19.99■□□□□ 0.79
SPTLC2-202ENST00000554365 USP6P35125 1406 aa19.99■□□□□ 0.79
SPTLC2-202ENST00000554365 CRB1P82279 1406 aa19.99■□□□□ 0.79
SPTLC2-202ENST00000554365 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
SPTLC2-202ENST00000554365 PARP4Q9UKK3 1724 aaKnown RBP19.97■□□□□ 0.79
SPTLC2-202ENST00000554365 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
SPTLC2-202ENST00000554365 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
SPTLC2-202ENST00000554365 SLIT3O75094 1523 aa19.95■□□□□ 0.78
SPTLC2-202ENST00000554365 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
SPTLC2-202ENST00000554365 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
SPTLC2-202ENST00000554365 EVC2Q86UK5 1308 aa19.94■□□□□ 0.78
SPTLC2-202ENST00000554365 OVOS2A0A0G2JMS6 1433 aa19.93■□□□□ 0.78
SPTLC2-202ENST00000554365 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
SPTLC2-202ENST00000554365 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
SPTLC2-202ENST00000554365 PIK3C2AO00443 1686 aa19.92■□□□□ 0.78
SPTLC2-202ENST00000554365 DDB1Q16531 1140 aa19.92■□□□□ 0.78
SPTLC2-202ENST00000554365 LRRC37A3O60309 1634 aa19.91■□□□□ 0.78
SPTLC2-202ENST00000554365 SOX12O15370 315 aa19.91■□□□□ 0.78
SPTLC2-202ENST00000554365 TONSLQ96HA7 1378 aa19.91■□□□□ 0.78
SPTLC2-202ENST00000554365 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
SPTLC2-202ENST00000554365 AXIN2Q9Y2T1 843 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms