RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FAM83GA6ND36 823 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 GPR162Q16538 588 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 RAPGEF4Q8WZA2 1011 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 DIP2CQ9Y2E4 1556 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 FER1L4A9Z1Z3 1794 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 A2ML1A8K2U0 1454 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 PTPN23Q9H3S7 1636 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 EVC2Q86UK5 1308 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 GJD4Q96KN9 370 aaPredicted RBP3.41□□□□□ -1.86
PRPF39-205ENST00000554081 TERF2IPQ9NYB0 399 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 PODXL2Q9NZ53 605 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 ROBO2Q9HCK4 1378 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 GCP02774 474 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 DDX10Q13206 875 aaKnown RBP3.4□□□□□ -1.86
PRPF39-205ENST00000554081 NBPF14Q5TI25 921 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 BICDL1Q6ZP65 573 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 SMIM5Q71RC9 77 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 TFCP2L1Q9NZI6 479 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 FBXO3Q9UK99 471 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 KNSTRNQ9Y448 316 aa3.4□□□□□ -1.86
PRPF39-205ENST00000554081 ERVK-7P63135 1459 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 ST18O60284 1047 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 HMOX1P09601 288 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 TMF1P82094 1093 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 GRM1Q13255 1194 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 MORC1Q86VD1 984 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 RGS17Q9UGC6 210 aaPredicted RBP3.4□□□□□ -1.87
PRPF39-205ENST00000554081 ABCA6Q8N139 1617 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 EZH2Q15910 746 aaKnown RBP3.4□□□□□ -1.87
PRPF39-205ENST00000554081 UNC5CLQ8IV45 518 aa3.4□□□□□ -1.87
PRPF39-205ENST00000554081 PPRC1Q5VV67 1664 aaKnown RBP3.39□□□□□ -1.87
PRPF39-205ENST00000554081 CDC42BPBQ9Y5S2 1711 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 NAIPQ13075 1403 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 GTF2E1P29083 439 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-205ENST00000554081 EIF4G2P78344 907 aaKnown RBP eCLIP3.39□□□□□ -1.87
PRPF39-205ENST00000554081 NECTIN2Q92692 538 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 UPF1Q92900 1129 aaKnown RBP eCLIP3.39□□□□□ -1.87
PRPF39-205ENST00000554081 DUOX2Q9NRD8 1548 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 PZPP20742 1482 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 BCORL1Q5H9F3 1711 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 CFAP74Q9C0B2 1584 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 C14orf93Q9H972 538 aaKnown RBP3.39□□□□□ -1.87
PRPF39-205ENST00000554081 EFCAB6Q5THR3 1501 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 ADGRL3Q9HAR2 1447 aa3.39□□□□□ -1.87
PRPF39-205ENST00000554081 KCNQ2O43526 872 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 CDC42BPAQ5VT25 1732 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 LRPPRCP42704 1394 aaKnown RBP3.38□□□□□ -1.87
PRPF39-205ENST00000554081 KIAA0232Q92628 1395 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 NLRP1Q9C000 1473 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 CEP170BQ9Y4F5 1589 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-205ENST00000554081 KDM5DQ9BY66 1539 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 CCDC24Q8N4L8 307 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 KIDINS220Q9ULH0 1771 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 RPGRIP1LQ68CZ1 1315 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 ACIN1Q9UKV3 1341 aaKnown RBP3.38□□□□□ -1.87
PRPF39-205ENST00000554081 PTPRTO14522 1441 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 ITSN2Q9NZM3 1697 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 PRIM1P49642 420 aaKnown RBP3.38□□□□□ -1.87
PRPF39-205ENST00000554081 EP400Q96L91 3159 aa3.38□□□□□ -1.87
PRPF39-205ENST00000554081 PREX2Q70Z35 1606 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 ABCC3O15438 1527 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 FRMPD1Q5SYB0 1578 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 KTN1Q86UP2 1357 aaKnown RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 ANKRD30BQ9BXX2 1392 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 PLEKHG1Q9ULL1 1385 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 RTL5Q5HYW3 569 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 ANKRD24Q8TF21 1146 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 EMILIN1Q9Y6C2 1016 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 PRDM15P57071 1507 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 SPATA31A6Q5VVP1 1343 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 U2AF1L5P0DN76 240 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 HSPA5P11021 654 aaKnown RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 U2AF1Q01081 240 aaKnown RBP eCLIP3.37□□□□□ -1.876e-6■■■□□ 14.7
PRPF39-205ENST00000554081 TMEM132AQ24JP5 1023 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 HSP90AB2PQ58FF8 381 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 TCP11L2Q8N4U5 519 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 YTHDC1Q96MU7 727 aaKnown RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 ZNF692Q9BU19 519 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-205ENST00000554081 PANK3Q9H999 370 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 RICTORQ6R327 1708 aa3.37□□□□□ -1.87
PRPF39-205ENST00000554081 ELL2O00472 640 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 TATP17735 454 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 PTF1AQ7RTS3 328 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 CFAP44Q96MT7 982 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 STK32BQ9NY57 414 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 LRRC7Q96NW7 1537 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 C1orf141Q5JVX7 400 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 PAXIP1Q6ZW49 1069 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 RRBP1Q9P2E9 1410 aaKnown RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 SPATA31A3Q5VYP0 1347 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 PRR36Q9H6K5 1346 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 SNPHO15079 494 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 CANXP27824 592 aaKnown RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 CDCA8Q53HL2 280 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 FAM196AQ6ZSG2 479 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 VSIG10Q8N0Z9 540 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 PDGFDQ9GZP0 370 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-205ENST00000554081 AXIN2Q9Y2T1 843 aa3.36□□□□□ -1.87
PRPF39-205ENST00000554081 RRP7AQ9Y3A4 280 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms