RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
TRAPPC6B-204ENST00000554018 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
TRAPPC6B-204ENST00000554018 CENPJQ9HC77 1338 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC6B-204ENST00000554018 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
TRAPPC6B-204ENST00000554018 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
TRAPPC6B-204ENST00000554018 ACEP12821 1306 aa17.1■□□□□ 0.33
TRAPPC6B-204ENST00000554018 VPS72Q15906 364 aa17.09■□□□□ 0.33
TRAPPC6B-204ENST00000554018 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
TRAPPC6B-204ENST00000554018 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
TRAPPC6B-204ENST00000554018 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
TRAPPC6B-204ENST00000554018 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC6B-204ENST00000554018 PLEKHG3A1L390 1219 aa17.08■□□□□ 0.32
TRAPPC6B-204ENST00000554018 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
TRAPPC6B-204ENST00000554018 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
TRAPPC6B-204ENST00000554018 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
TRAPPC6B-204ENST00000554018 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
TRAPPC6B-204ENST00000554018 NUTM2GQ5VZR2 741 aa17.06■□□□□ 0.32
TRAPPC6B-204ENST00000554018 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
TRAPPC6B-204ENST00000554018 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
TRAPPC6B-204ENST00000554018 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
TRAPPC6B-204ENST00000554018 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
TRAPPC6B-204ENST00000554018 SEPT12Q8IYM1 358 aa17.04■□□□□ 0.32
TRAPPC6B-204ENST00000554018 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC6B-204ENST00000554018 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
TRAPPC6B-204ENST00000554018 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
TRAPPC6B-204ENST00000554018 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
TRAPPC6B-204ENST00000554018 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
TRAPPC6B-204ENST00000554018 EVC2Q86UK5 1308 aa17■□□□□ 0.31
TRAPPC6B-204ENST00000554018 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
TRAPPC6B-204ENST00000554018 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
TRAPPC6B-204ENST00000554018 CHRNA2Q15822 529 aa17■□□□□ 0.31
TRAPPC6B-204ENST00000554018 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6B-204ENST00000554018 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
TRAPPC6B-204ENST00000554018 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
TRAPPC6B-204ENST00000554018 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
TRAPPC6B-204ENST00000554018 A0A0G2JS52 829 aa16.97■□□□□ 0.31
TRAPPC6B-204ENST00000554018 MYT1Q01538 1121 aa16.97■□□□□ 0.31
TRAPPC6B-204ENST00000554018 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
TRAPPC6B-204ENST00000554018 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
TRAPPC6B-204ENST00000554018 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
TRAPPC6B-204ENST00000554018 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
TRAPPC6B-204ENST00000554018 USP6P35125 1406 aa16.96■□□□□ 0.3
TRAPPC6B-204ENST00000554018 USP19O94966 1318 aa16.96■□□□□ 0.3
TRAPPC6B-204ENST00000554018 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
TRAPPC6B-204ENST00000554018 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
TRAPPC6B-204ENST00000554018 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC6B-204ENST00000554018 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
TRAPPC6B-204ENST00000554018 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
TRAPPC6B-204ENST00000554018 GCP02774 474 aa16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 LMO7Q8WWI1 1683 aa16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 THSD7AQ9UPZ6 1657 aa16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 SPATA31A1Q5TZJ5 1347 aa16.93■□□□□ 0.3
TRAPPC6B-204ENST00000554018 CPDO75976 1380 aa16.92■□□□□ 0.3
TRAPPC6B-204ENST00000554018 NLRP6P59044 892 aa16.92■□□□□ 0.3
TRAPPC6B-204ENST00000554018 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
TRAPPC6B-204ENST00000554018 EVA1CP58658 441 aa16.91■□□□□ 0.3
TRAPPC6B-204ENST00000554018 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
TRAPPC6B-204ENST00000554018 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
TRAPPC6B-204ENST00000554018 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
TRAPPC6B-204ENST00000554018 SLIT3O75094 1523 aa16.88■□□□□ 0.29
TRAPPC6B-204ENST00000554018 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6B-204ENST00000554018 LARP1Q6PKG0 1096 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6B-204ENST00000554018 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
TRAPPC6B-204ENST00000554018 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
TRAPPC6B-204ENST00000554018 COL18A1P39060 1754 aa16.87■□□□□ 0.29
TRAPPC6B-204ENST00000554018 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
TRAPPC6B-204ENST00000554018 RGPD1P0DJD0 1748 aa16.86■□□□□ 0.29
TRAPPC6B-204ENST00000554018 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
TRAPPC6B-204ENST00000554018 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC6B-204ENST00000554018 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
TRAPPC6B-204ENST00000554018 TTC21AQ8NDW8 1320 aa16.84■□□□□ 0.29
TRAPPC6B-204ENST00000554018 SOX12O15370 315 aa16.83■□□□□ 0.28
TRAPPC6B-204ENST00000554018 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
TRAPPC6B-204ENST00000554018 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
TRAPPC6B-204ENST00000554018 TCP11L2Q8N4U5 519 aa16.83■□□□□ 0.28
TRAPPC6B-204ENST00000554018 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
TRAPPC6B-204ENST00000554018 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
TRAPPC6B-204ENST00000554018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAPPC6B-204ENST00000554018 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
TRAPPC6B-204ENST00000554018 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
TRAPPC6B-204ENST00000554018 AXIN2Q9Y2T1 843 aa16.81■□□□□ 0.28
TRAPPC6B-204ENST00000554018 PARP4Q9UKK3 1724 aaKnown RBP16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 BAG6P46379 1132 aa16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 TESK2Q96S53 571 aa16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 NFAT5O94916 1531 aa16.8■□□□□ 0.28
TRAPPC6B-204ENST00000554018 CRB1P82279 1406 aa16.79■□□□□ 0.28
TRAPPC6B-204ENST00000554018 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
TRAPPC6B-204ENST00000554018 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
TRAPPC6B-204ENST00000554018 THRAP3Q9Y2W1 955 aaKnown RBP16.79■□□□□ 0.28
TRAPPC6B-204ENST00000554018 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
TRAPPC6B-204ENST00000554018 EN1Q05925 392 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms