RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 CDK12Q9NYV4 1490 aaPredicted RBP29.43■■■□□ 2.3
HIF1A-206ENST00000553999 CARD11Q9BXL7 1154 aa29.43■■■□□ 2.3
HIF1A-206ENST00000553999 PLCH1Q4KWH8 1693 aa29.41■■■□□ 2.3
HIF1A-206ENST00000553999 SLIT2O94813 1529 aa29.4■■■□□ 2.3
HIF1A-206ENST00000553999 CCDC9Q9Y3X0 531 aaKnown RBP29.39■■■□□ 2.3
HIF1A-206ENST00000553999 EVC2Q86UK5 1308 aa29.39■■■□□ 2.3
HIF1A-206ENST00000553999 POLR3AO14802 1390 aaPredicted RBP29.39■■■□□ 2.29
HIF1A-206ENST00000553999 RALGAPBQ86X10 1494 aa29.38■■■□□ 2.29
HIF1A-206ENST00000553999 UNC5CLQ8IV45 518 aa29.38■■■□□ 2.29
HIF1A-206ENST00000553999 PLEKHG3A1L390 1219 aa29.37■■■□□ 2.29
HIF1A-206ENST00000553999 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
HIF1A-206ENST00000553999 CABP1Q9NZU7 370 aa29.37■■■□□ 2.29
HIF1A-206ENST00000553999 GJD4Q96KN9 370 aaPredicted RBP29.35■■■□□ 2.29
HIF1A-206ENST00000553999 CRYBG1Q9Y4K1 1723 aa29.34■■■□□ 2.29
HIF1A-206ENST00000553999 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.34■■■□□ 2.29
HIF1A-206ENST00000553999 UPF1Q92900 1129 aaKnown RBP eCLIP29.33■■■□□ 2.29
HIF1A-206ENST00000553999 GLI3P10071 1580 aa29.32■■■□□ 2.28
HIF1A-206ENST00000553999 CHRNA2Q15822 529 aa29.31■■■□□ 2.28
HIF1A-206ENST00000553999 ABTB2Q8N961 1025 aa29.31■■■□□ 2.28
HIF1A-206ENST00000553999 PRDM11Q9NQV5 511 aa29.31■■■□□ 2.28
HIF1A-206ENST00000553999 BTG4Q9NY30 223 aa29.31■■■□□ 2.28
HIF1A-206ENST00000553999 PHRF1Q9P1Y6 1649 aaKnown RBP29.31■■■□□ 2.28
HIF1A-206ENST00000553999 ZC3H6P61129 1189 aaKnown RBP29.3■■■□□ 2.28
HIF1A-206ENST00000553999 KIAA0232Q92628 1395 aa29.28■■■□□ 2.28
HIF1A-206ENST00000553999 NWD2Q9ULI1 1742 aa29.27■■■□□ 2.28
HIF1A-206ENST00000553999 COL14A1Q05707 1796 aaKnown RBP29.26■■■□□ 2.28
HIF1A-206ENST00000553999 A0A0G2JS52 829 aa29.26■■■□□ 2.27
HIF1A-206ENST00000553999 ZBTB7CA1YPR0 619 aa29.26■■■□□ 2.27
HIF1A-206ENST00000553999 MYT1Q01538 1121 aa29.26■■■□□ 2.27
HIF1A-206ENST00000553999 USP6P35125 1406 aa29.26■■■□□ 2.27
HIF1A-206ENST00000553999 VPS72Q15906 364 aa29.25■■■□□ 2.27
HIF1A-206ENST00000553999 NRAPQ86VF7 1730 aa29.25■■■□□ 2.27
HIF1A-206ENST00000553999 NRKQ7Z2Y5 1582 aa29.22■■■□□ 2.27
HIF1A-206ENST00000553999 STRN4Q9NRL3 753 aa29.22■■■□□ 2.27
HIF1A-206ENST00000553999 ATAD2Q6PL18 1390 aa29.21■■■□□ 2.27
HIF1A-206ENST00000553999 SEPT12Q8IYM1 358 aa29.19■■■□□ 2.26
HIF1A-206ENST00000553999 TMC1Q8TDI8 760 aa29.19■■■□□ 2.26
HIF1A-206ENST00000553999 NLRP6P59044 892 aa29.18■■■□□ 2.26
HIF1A-206ENST00000553999 NLRP13Q86W25 1043 aa29.18■■■□□ 2.26
HIF1A-206ENST00000553999 SOX12O15370 315 aa29.17■■■□□ 2.26
HIF1A-206ENST00000553999 FAM98CQ17RN3 349 aaKnown RBP29.17■■■□□ 2.26
HIF1A-206ENST00000553999 USP19O94966 1318 aa29.17■■■□□ 2.26
HIF1A-206ENST00000553999 SBNO2Q9Y2G9 1366 aa29.16■■■□□ 2.26
HIF1A-206ENST00000553999 ST20-MTHFSA0A0A6YYL1 179 aa29.16■■■□□ 2.26
HIF1A-206ENST00000553999 PIK3C2AO00443 1686 aa29.15■■■□□ 2.26
HIF1A-206ENST00000553999 KTN1Q86UP2 1357 aaKnown RBP29.13■■■□□ 2.25
HIF1A-206ENST00000553999 AKAP12Q02952 1782 aa29.13■■■□□ 2.25
HIF1A-206ENST00000553999 BRWD3Q6RI45 1802 aa29.13■■■□□ 2.25
HIF1A-206ENST00000553999 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
HIF1A-206ENST00000553999 TTC21BQ7Z4L5 1316 aa29.13■■■□□ 2.25
HIF1A-206ENST00000553999 GCP02774 474 aa29.12■■■□□ 2.25
HIF1A-206ENST00000553999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.12■■■□□ 2.25
HIF1A-206ENST00000553999 USP35Q9P2H5 1018 aa29.12■■■□□ 2.25
HIF1A-206ENST00000553999 SSH2Q76I76 1423 aa29.11■■■□□ 2.25
HIF1A-206ENST00000553999 SLC12A5Q9H2X9 1139 aa29.1■■■□□ 2.25
HIF1A-206ENST00000553999 EVA1CP58658 441 aa29.09■■■□□ 2.25
HIF1A-206ENST00000553999 SPATA31A5Q5VU36 1347 aa29.09■■■□□ 2.25
HIF1A-206ENST00000553999 SPATA31A7Q8IWB4 1347 aa29.09■■■□□ 2.25
HIF1A-206ENST00000553999 BRD4O60885 1362 aaPredicted RBP29.09■■■□□ 2.25
HIF1A-206ENST00000553999 USP47Q96K76 1375 aa29.09■■■□□ 2.25
HIF1A-206ENST00000553999 TESK2Q96S53 571 aa29.08■■■□□ 2.25
HIF1A-206ENST00000553999 ZRANB1Q9UGI0 708 aa29.08■■■□□ 2.25
HIF1A-206ENST00000553999 CPSF1Q10570 1443 aaKnown RBP29.08■■■□□ 2.25
HIF1A-206ENST00000553999 ZNF692Q9BU19 519 aaPredicted RBP29.07■■■□□ 2.24
HIF1A-206ENST00000553999 CAMTA1Q9Y6Y1 1673 aa29.07■■■□□ 2.24
HIF1A-206ENST00000553999 MON2Q7Z3U7 1717 aa29.06■■■□□ 2.24
HIF1A-206ENST00000553999 SLIT3O75094 1523 aa29.05■■■□□ 2.24
HIF1A-206ENST00000553999 CD163L1Q9NR16 1453 aa29.05■■■□□ 2.24
HIF1A-206ENST00000553999 CPDO75976 1380 aa29.05■■■□□ 2.24
HIF1A-206ENST00000553999 FAM182BQ5T319 152 aa29.05■■■□□ 2.24
HIF1A-206ENST00000553999 KRT27Q7Z3Y8 459 aa29.05■■■□□ 2.24
HIF1A-206ENST00000553999 LARP1Q6PKG0 1096 aaKnown RBP29.04■■■□□ 2.24
HIF1A-206ENST00000553999 NME9Q86XW9 330 aa29.04■■■□□ 2.24
HIF1A-206ENST00000553999 LMO7Q8WWI1 1683 aa29.03■■■□□ 2.24
HIF1A-206ENST00000553999 HDGFL2Q7Z4V5 671 aaPredicted RBP29.03■■■□□ 2.24
HIF1A-206ENST00000553999 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
HIF1A-206ENST00000553999 TTC21AQ8NDW8 1320 aa29.01■■■□□ 2.23
HIF1A-206ENST00000553999 A0A1W2PP64 1363 aa29.01■■■□□ 2.23
HIF1A-206ENST00000553999 CLSPNQ9HAW4 1339 aa29■■■□□ 2.23
HIF1A-206ENST00000553999 ONECUT3O60422 494 aaPredicted RBP29■■■□□ 2.23
HIF1A-206ENST00000553999 COL5A2P05997 1499 aaPredicted RBP28.97■■■□□ 2.23
HIF1A-206ENST00000553999 THSD7AQ9UPZ6 1657 aa28.96■■■□□ 2.23
HIF1A-206ENST00000553999 TERF2IPQ9NYB0 399 aa28.96■■■□□ 2.23
HIF1A-206ENST00000553999 TMF1P82094 1093 aa28.94■■■□□ 2.22
HIF1A-206ENST00000553999 DEFB132Q7Z7B7 95 aa28.93■■■□□ 2.22
HIF1A-206ENST00000553999 AXIN2Q9Y2T1 843 aa28.93■■■□□ 2.22
HIF1A-206ENST00000553999 AATKQ6ZMQ8 1374 aa28.92■■■□□ 2.22
HIF1A-206ENST00000553999 KCNH5Q8NCM2 988 aa28.92■■■□□ 2.22
HIF1A-206ENST00000553999 TIMELESSQ9UNS1 1208 aa28.92■■■□□ 2.22
HIF1A-206ENST00000553999 BLMP54132 1417 aaPredicted RBP28.92■■■□□ 2.22
HIF1A-206ENST00000553999 EDC4Q6P2E9 1401 aaKnown RBP28.92■■■□□ 2.22
HIF1A-206ENST00000553999 NFAT5O94916 1531 aa28.91■■■□□ 2.22
HIF1A-206ENST00000553999 SF3B2Q13435 895 aaKnown RBP28.9■■■□□ 2.22
HIF1A-206ENST00000553999 TOM1L2Q6ZVM7 507 aa28.9■■■□□ 2.22
HIF1A-206ENST00000553999 ARHGEF25Q86VW2 580 aa28.9■■■□□ 2.22
HIF1A-206ENST00000553999 TCP11L2Q8N4U5 519 aa28.9■■■□□ 2.22
HIF1A-206ENST00000553999 EP400Q96L91 3159 aa28.89■■■□□ 2.22
HIF1A-206ENST00000553999 CSB-PGBD3P0DP91 1061 aa28.89■■■□□ 2.22
HIF1A-206ENST00000553999 COL18A1P39060 1754 aa28.88■■■□□ 2.21
HIF1A-206ENST00000553999 CRB1P82279 1406 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms