RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 ROCK2O75116 1388 aaKnown RBP25.34■■□□□ 1.65
FOXN3-204ENST00000553840 ACEP12821 1306 aa25.32■■□□□ 1.64
FOXN3-204ENST00000553840 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
FOXN3-204ENST00000553840 PLEKHG3A1L390 1219 aa25.31■■□□□ 1.64
FOXN3-204ENST00000553840 ATAD2Q6PL18 1390 aa25.31■■□□□ 1.64
FOXN3-204ENST00000553840 TONSLQ96HA7 1378 aa25.3■■□□□ 1.64
FOXN3-204ENST00000553840 NBPF8Q3BBV2 869 aa25.29■■□□□ 1.64
FOXN3-204ENST00000553840 CABP2Q9NPB3 220 aa25.28■■□□□ 1.64
FOXN3-204ENST00000553840 COL14A1Q05707 1796 aaKnown RBP25.28■■□□□ 1.64
FOXN3-204ENST00000553840 PPIP5K1Q6PFW1 1433 aa25.28■■□□□ 1.64
FOXN3-204ENST00000553840 RALGAPBQ86X10 1494 aa25.28■■□□□ 1.64
FOXN3-204ENST00000553840 CRYBG1Q9Y4K1 1723 aa25.27■■□□□ 1.64
FOXN3-204ENST00000553840 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
FOXN3-204ENST00000553840 VPS72Q15906 364 aa25.27■■□□□ 1.64
FOXN3-204ENST00000553840 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
FOXN3-204ENST00000553840 EVC2Q86UK5 1308 aa25.27■■□□□ 1.64
FOXN3-204ENST00000553840 GLI3P10071 1580 aa25.25■■□□□ 1.63
FOXN3-204ENST00000553840 ABTB2Q8N961 1025 aa25.23■■□□□ 1.63
FOXN3-204ENST00000553840 BTG4Q9NY30 223 aa25.23■■□□□ 1.63
FOXN3-204ENST00000553840 PRDM11Q9NQV5 511 aa25.22■■□□□ 1.63
FOXN3-204ENST00000553840 NRAPQ86VF7 1730 aa25.21■■□□□ 1.63
FOXN3-204ENST00000553840 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
FOXN3-204ENST00000553840 BRD4O60885 1362 aaPredicted RBP25.2■■□□□ 1.63
FOXN3-204ENST00000553840 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
FOXN3-204ENST00000553840 CABP1Q9NZU7 370 aa25.2■■□□□ 1.62
FOXN3-204ENST00000553840 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
FOXN3-204ENST00000553840 NLRP13Q86W25 1043 aa25.17■■□□□ 1.62
FOXN3-204ENST00000553840 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
FOXN3-204ENST00000553840 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
FOXN3-204ENST00000553840 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
FOXN3-204ENST00000553840 SEPT12Q8IYM1 358 aa25.15■■□□□ 1.62
FOXN3-204ENST00000553840 A0A0G2JS52 829 aa25.14■■□□□ 1.62
FOXN3-204ENST00000553840 ONECUT3O60422 494 aaPredicted RBP25.14■■□□□ 1.62
FOXN3-204ENST00000553840 ZC3H6P61129 1189 aaKnown RBP25.14■■□□□ 1.62
FOXN3-204ENST00000553840 MYT1Q01538 1121 aa25.14■■□□□ 1.62
FOXN3-204ENST00000553840 USP6P35125 1406 aa25.13■■□□□ 1.61
FOXN3-204ENST00000553840 ZNF692Q9BU19 519 aaPredicted RBP25.12■■□□□ 1.61
FOXN3-204ENST00000553840 SBNO2Q9Y2G9 1366 aa25.12■■□□□ 1.61
FOXN3-204ENST00000553840 NRKQ7Z2Y5 1582 aa25.1■■□□□ 1.61
FOXN3-204ENST00000553840 CHRNA2Q15822 529 aa25.1■■□□□ 1.61
FOXN3-204ENST00000553840 USP19O94966 1318 aa25.1■■□□□ 1.61
FOXN3-204ENST00000553840 AKAP12Q02952 1782 aa25.09■■□□□ 1.61
FOXN3-204ENST00000553840 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
FOXN3-204ENST00000553840 SPATA31A5Q5VU36 1347 aa25.09■■□□□ 1.61
FOXN3-204ENST00000553840 SPATA31A7Q8IWB4 1347 aa25.09■■□□□ 1.61
FOXN3-204ENST00000553840 EVA1CP58658 441 aa25.08■■□□□ 1.61
FOXN3-204ENST00000553840 NLRP6P59044 892 aa25.08■■□□□ 1.61
FOXN3-204ENST00000553840 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
FOXN3-204ENST00000553840 CPDO75976 1380 aa25.07■■□□□ 1.6
FOXN3-204ENST00000553840 GCP02774 474 aa25.07■■□□□ 1.6
FOXN3-204ENST00000553840 STRN4Q9NRL3 753 aa25.07■■□□□ 1.6
FOXN3-204ENST00000553840 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
FOXN3-204ENST00000553840 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
FOXN3-204ENST00000553840 SSH2Q76I76 1423 aa25.03■■□□□ 1.6
FOXN3-204ENST00000553840 PIK3C2AO00443 1686 aa25.02■■□□□ 1.6
FOXN3-204ENST00000553840 SPATA31A1Q5TZJ5 1347 aa25.02■■□□□ 1.6
FOXN3-204ENST00000553840 TTC21AQ8NDW8 1320 aa25.02■■□□□ 1.6
FOXN3-204ENST00000553840 KTN1Q86UP2 1357 aaKnown RBP25.02■■□□□ 1.6
FOXN3-204ENST00000553840 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
FOXN3-204ENST00000553840 TTC21BQ7Z4L5 1316 aa25.01■■□□□ 1.59
FOXN3-204ENST00000553840 EP400Q96L91 3159 aa25.01■■□□□ 1.59
FOXN3-204ENST00000553840 CPSF1Q10570 1443 aaKnown RBP25■■□□□ 1.59
FOXN3-204ENST00000553840 SLIT3O75094 1523 aa25■■□□□ 1.59
FOXN3-204ENST00000553840 LMO7Q8WWI1 1683 aa25■■□□□ 1.59
FOXN3-204ENST00000553840 CAMTA1Q9Y6Y1 1673 aa25■■□□□ 1.59
FOXN3-204ENST00000553840 ZBTB7CA1YPR0 619 aa24.99■■□□□ 1.59
FOXN3-204ENST00000553840 TMC1Q8TDI8 760 aa24.99■■□□□ 1.59
FOXN3-204ENST00000553840 THSD7AQ9UPZ6 1657 aa24.99■■□□□ 1.59
FOXN3-204ENST00000553840 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
FOXN3-204ENST00000553840 KCNH5Q8NCM2 988 aa24.98■■□□□ 1.59
FOXN3-204ENST00000553840 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
FOXN3-204ENST00000553840 PUS7Q96PZ0 661 aaKnown RBP24.97■■□□□ 1.59
FOXN3-204ENST00000553840 HDGFL2Q7Z4V5 671 aaPredicted RBP24.96■■□□□ 1.59
FOXN3-204ENST00000553840 LARP1Q6PKG0 1096 aaKnown RBP24.95■■□□□ 1.58
FOXN3-204ENST00000553840 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
FOXN3-204ENST00000553840 AATKQ6ZMQ8 1374 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 CLSPNQ9HAW4 1339 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 ST20-MTHFSA0A0A6YYL1 179 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 BARGINQ6ZT62 677 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 TERF2IPQ9NYB0 399 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
FOXN3-204ENST00000553840 TCP11L2Q8N4U5 519 aa24.93■■□□□ 1.58
FOXN3-204ENST00000553840 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
FOXN3-204ENST00000553840 COL5A2P05997 1499 aaPredicted RBP24.93■■□□□ 1.58
FOXN3-204ENST00000553840 THRAP3Q9Y2W1 955 aaKnown RBP24.92■■□□□ 1.58
FOXN3-204ENST00000553840 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.91■■□□□ 1.581e-7■■■□□ 14.8
FOXN3-204ENST00000553840 SLC12A5Q9H2X9 1139 aa24.9■■□□□ 1.58
FOXN3-204ENST00000553840 RGPD1P0DJD0 1748 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 CRB1P82279 1406 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 SOX12O15370 315 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 BAG6P46379 1132 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 PDE3BQ13370 1112 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 TESK2Q96S53 571 aa24.89■■□□□ 1.58
FOXN3-204ENST00000553840 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.57
FOXN3-204ENST00000553840 COL18A1P39060 1754 aa24.88■■□□□ 1.57
FOXN3-204ENST00000553840 NINLQ9Y2I6 1382 aa24.88■■□□□ 1.57
FOXN3-204ENST00000553840 FAM182BQ5T319 152 aa24.87■■□□□ 1.57
FOXN3-204ENST00000553840 DEFB132Q7Z7B7 95 aa24.87■■□□□ 1.57
FOXN3-204ENST00000553840 ARHGEF25Q86VW2 580 aa24.87■■□□□ 1.57
FOXN3-204ENST00000553840 EDC4Q6P2E9 1401 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms