RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
APEX1-205ENST00000553555 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.56
APEX1-205ENST00000553555 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
APEX1-205ENST00000553555 MST1RQ04912 1400 aa18.57■□□□□ 0.56
APEX1-205ENST00000553555 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
APEX1-205ENST00000553555 NME9Q86XW9 330 aa18.56■□□□□ 0.56
APEX1-205ENST00000553555 ORAI2Q96SN7 254 aa18.56■□□□□ 0.56
APEX1-205ENST00000553555 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
APEX1-205ENST00000553555 KIF1AQ12756 1690 aa18.54■□□□□ 0.56
APEX1-205ENST00000553555 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
APEX1-205ENST00000553555 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
APEX1-205ENST00000553555 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
APEX1-205ENST00000553555 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
APEX1-205ENST00000553555 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
APEX1-205ENST00000553555 LTBP4Q8N2S1 1624 aa18.52■□□□□ 0.55
APEX1-205ENST00000553555 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.55
APEX1-205ENST00000553555 PSME1Q06323 249 aa18.5■□□□□ 0.55
APEX1-205ENST00000553555 COG3Q96JB2 828 aa18.5■□□□□ 0.55
APEX1-205ENST00000553555 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
APEX1-205ENST00000553555 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
APEX1-205ENST00000553555 FOXO3O43524 673 aa18.49■□□□□ 0.55
APEX1-205ENST00000553555 MTHFSP49914 203 aa18.48■□□□□ 0.55
APEX1-205ENST00000553555 OVOS2A0A0J9YW53 1432 aa18.48■□□□□ 0.55
APEX1-205ENST00000553555 OVOS2Q6IE36 1432 aa18.48■□□□□ 0.55
APEX1-205ENST00000553555 USP31Q70CQ4 1352 aa18.47■□□□□ 0.55
APEX1-205ENST00000553555 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
APEX1-205ENST00000553555 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
APEX1-205ENST00000553555 TRPM3Q9HCF6 1732 aaPredicted RBP18.46■□□□□ 0.55
APEX1-205ENST00000553555 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
APEX1-205ENST00000553555 MARF1Q9Y4F3 1742 aaKnown RBP18.45■□□□□ 0.54
APEX1-205ENST00000553555 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
APEX1-205ENST00000553555 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
APEX1-205ENST00000553555 ABTB2Q8N961 1025 aa18.44■□□□□ 0.54
APEX1-205ENST00000553555 FBLN1P23142 703 aa18.43■□□□□ 0.54
APEX1-205ENST00000553555 NLRP6P59044 892 aa18.43■□□□□ 0.54
APEX1-205ENST00000553555 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
APEX1-205ENST00000553555 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
APEX1-205ENST00000553555 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
APEX1-205ENST00000553555 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
APEX1-205ENST00000553555 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
APEX1-205ENST00000553555 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
APEX1-205ENST00000553555 ALS2Q96Q42 1657 aa18.4■□□□□ 0.54
APEX1-205ENST00000553555 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
APEX1-205ENST00000553555 INSRP06213 1382 aa18.39■□□□□ 0.53
APEX1-205ENST00000553555 PNPLA6Q8IY17 1366 aa18.39■□□□□ 0.53
APEX1-205ENST00000553555 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
APEX1-205ENST00000553555 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
APEX1-205ENST00000553555 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
APEX1-205ENST00000553555 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
APEX1-205ENST00000553555 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
APEX1-205ENST00000553555 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
APEX1-205ENST00000553555 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
APEX1-205ENST00000553555 PXDNQ92626 1479 aa18.37■□□□□ 0.53
APEX1-205ENST00000553555 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
APEX1-205ENST00000553555 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
APEX1-205ENST00000553555 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
APEX1-205ENST00000553555 CDK12Q9NYV4 1490 aaPredicted RBP18.35■□□□□ 0.53
APEX1-205ENST00000553555 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
APEX1-205ENST00000553555 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
APEX1-205ENST00000553555 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
APEX1-205ENST00000553555 SOX12O15370 315 aa18.34■□□□□ 0.53
APEX1-205ENST00000553555 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
APEX1-205ENST00000553555 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
APEX1-205ENST00000553555 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
APEX1-205ENST00000553555 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
APEX1-205ENST00000553555 LTN1O94822 1766 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 SLIT3O75094 1523 aa18.32■□□□□ 0.52
APEX1-205ENST00000553555 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
APEX1-205ENST00000553555 ROBO1Q9Y6N7 1651 aa18.31■□□□□ 0.52
APEX1-205ENST00000553555 USP19O94966 1318 aa18.31■□□□□ 0.52
APEX1-205ENST00000553555 NFAT5O94916 1531 aa18.31■□□□□ 0.52
APEX1-205ENST00000553555 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
APEX1-205ENST00000553555 GCP02774 474 aa18.28■□□□□ 0.52
APEX1-205ENST00000553555 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
APEX1-205ENST00000553555 IL13P35225 146 aa18.28■□□□□ 0.52
APEX1-205ENST00000553555 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
APEX1-205ENST00000553555 MED1Q15648 1581 aaPredicted RBP18.28■□□□□ 0.52
APEX1-205ENST00000553555 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
APEX1-205ENST00000553555 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
APEX1-205ENST00000553555 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
APEX1-205ENST00000553555 AMPHP49418 695 aa18.27■□□□□ 0.52
APEX1-205ENST00000553555 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
APEX1-205ENST00000553555 FLT4P35916 1363 aa18.27■□□□□ 0.52
APEX1-205ENST00000553555 TOM1O60784 492 aa18.27■□□□□ 0.51
APEX1-205ENST00000553555 HSP90AB2PQ58FF8 381 aa18.27■□□□□ 0.51
APEX1-205ENST00000553555 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
APEX1-205ENST00000553555 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
APEX1-205ENST00000553555 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
APEX1-205ENST00000553555 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
APEX1-205ENST00000553555 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
APEX1-205ENST00000553555 HOXC9P31274 260 aa18.24■□□□□ 0.51
APEX1-205ENST00000553555 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
APEX1-205ENST00000553555 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
APEX1-205ENST00000553555 ARHGEF25Q86VW2 580 aa18.23■□□□□ 0.51
APEX1-205ENST00000553555 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
APEX1-205ENST00000553555 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms